The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	1232574	1304482	5364172	plate,head,capsid,terminase,integrase,holin,protease,tail,portal	Stenotrophomonas_phage(57.5%)	78	1225847:1225864	1265256:1265273
1225847:1225864	attL	GGCAAGACCACGCTGCTG	NA	NA	NA	NA
WP_003490845.1|1232574_1234656_+|holin	phospholipase C, phosphocholine-specific	holin	NA	NA	NA	NA
WP_124632115.1|1235260_1235329_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011050660.1|1235533_1236178_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_016849001.1|1236446_1237745_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_029828204.1|1237812_1238847_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
WP_016850314.1|1239060_1239807_+	CvpA family protein	NA	NA	NA	NA	NA
WP_003483730.1|1239837_1241304_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	39.9	4.1e-85
WP_033482896.1|1241499_1242324_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_016850317.1|1242467_1242677_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029828209.1|1244295_1244715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016849994.1|1244900_1245644_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
WP_011050667.1|1246123_1246666_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_016849993.1|1246646_1247783_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
WP_033482898.1|1248005_1249532_-	exopolyphosphatase	NA	NA	NA	NA	NA
WP_003483747.1|1249703_1251806_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
WP_011050669.1|1251918_1253262_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	33.3	6.5e-29
WP_003483753.1|1253319_1254009_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	35.7	1.0e-33
WP_033482899.1|1254191_1255838_-	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_005915911.1|1255987_1256296_+	glutaredoxin 3	NA	A0A2L0UZG6	Agrobacterium_phage	43.2	3.6e-07
WP_003483760.1|1256292_1256688_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_003483762.1|1256913_1257921_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_016850996.1|1258060_1258822_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_016850997.1|1259518_1260136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016850998.1|1260152_1261109_-|integrase	tyrosine-type recombinase/integrase	integrase	V9IQN0	Stenotrophomonas_phage	55.3	1.7e-92
WP_078585787.1|1261333_1261555_-	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	56.3	1.6e-14
WP_016850999.1|1261551_1261761_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851000.1|1261757_1261961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851001.1|1262026_1262251_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851002.1|1262247_1262520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014091203.1|1262512_1262695_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851003.1|1262687_1263062_-	hypothetical protein	NA	V9IQL6	Stenotrophomonas_phage	48.8	1.7e-19
WP_016849270.1|1263191_1263464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016849269.1|1263463_1263751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015472861.1|1263747_1263966_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078585791.1|1264286_1266959_-	bifunctional DNA primase/helicase	NA	V9IQW5	Stenotrophomonas_phage	69.7	0.0e+00
1265256:1265273	attR	CAGCAGCGTGGTCTTGCC	NA	NA	NA	NA
WP_016851008.1|1266991_1267204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851009.1|1267200_1267479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_008572766.1|1267489_1267810_-	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	58.7	2.0e-24
WP_078537260.1|1267812_1268061_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029828228.1|1268146_1268578_+	transcriptional regulator	NA	E5E3U2	Burkholderia_phage	38.2	1.4e-09
WP_016851031.1|1269184_1270171_-	phage late control D family protein	NA	V9IQM7	Stenotrophomonas_phage	55.7	2.8e-93
WP_016851032.1|1270167_1270569_-|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	61.4	3.5e-39
WP_029828231.1|1270581_1273452_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	47.1	8.9e-193
WP_005922203.1|1273481_1273595_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_029828232.1|1273603_1273906_-|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	67.4	2.2e-25
WP_016850450.1|1273951_1274461_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	81.1	2.1e-73
WP_029828235.1|1274490_1275657_-|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	63.2	1.1e-133
WP_016850452.1|1275668_1276028_-|plate	phage baseplate protein	plate	V9IQW0	Stenotrophomonas_phage	62.7	2.1e-35
WP_016850453.1|1276024_1276588_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	47.0	8.2e-26
WP_016850454.1|1276730_1277405_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016850455.1|1277407_1277701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016850456.1|1277774_1279574_-	hypothetical protein	NA	V9IQX0	Stenotrophomonas_phage	37.6	8.9e-82
WP_029828239.1|1279586_1280129_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	56.6	1.1e-51
WP_016851159.1|1280121_1281012_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	53.0	2.6e-82
WP_078585788.1|1281107_1282646_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_016851160.1|1282827_1283277_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	56.5	6.3e-37
WP_016851161.1|1283264_1283684_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	65.2	1.1e-40
WP_016851162.1|1283680_1284169_-	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	52.6	1.2e-28
WP_078585789.1|1284168_1284810_-	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	60.4	2.7e-49
WP_005922189.1|1284806_1285082_-|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	1.3e-21
WP_005929454.1|1285074_1285431_-	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	3.5e-22
WP_005917735.1|1285435_1285645_-|tail	tail protein	tail	K4PAW7	Burkholderia_phage	59.4	7.0e-15
WP_029828243.1|1285644_1286112_-|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	4.6e-30
WP_016851153.1|1286210_1286930_-|terminase	terminase	terminase	Q9ZXM2	Pseudomonas_virus	63.8	5.3e-70
WP_029828245.1|1286933_1287947_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	71.4	9.3e-137
WP_029828246.1|1287993_1288836_-|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	53.5	3.4e-68
WP_033482900.1|1288957_1290742_+|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	76.5	7.3e-270
WP_016850658.1|1290741_1291755_+|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	71.9	5.8e-139
WP_078585599.1|1291780_1292026_+	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	51.2	7.0e-14
WP_029828252.1|1291943_1292645_+	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	75.5	2.1e-103
WP_078585598.1|1292817_1293234_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_026007262.1|1294161_1295061_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_016851285.1|1296202_1297324_-	RelA/SpoT domain-containing protein	NA	A0A1B0VBT5	Salmonella_phage	29.4	1.9e-29
WP_033482901.1|1298331_1298661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016851283.1|1298846_1299044_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851282.1|1301058_1302351_+	trigger factor	NA	NA	NA	NA	NA
WP_002806026.1|1302443_1303070_+	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
WP_003483788.1|1303195_1304482_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.9	5.3e-137
>prophage 2
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	2036744	2047581	5364172	tRNA	Micromonas_pusilla_virus(16.67%)	13	NA	NA
WP_005915030.1|2036744_2038421_+	2-polyprenylphenol 6-hydroxylase	NA	G8DDN0	Micromonas_pusilla_virus	29.4	1.9e-41
WP_005915033.1|2038506_2039148_+	transcriptional repressor LexA	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
WP_003481871.1|2039320_2040355_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.3	5.1e-114
WP_003481873.1|2040666_2041155_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_016849897.1|2041256_2043905_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	40.0	1.7e-84
WP_003481884.1|2044044_2044257_+	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
WP_033482667.1|2044477_2044702_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_029828732.1|2044688_2044910_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029828734.1|2045043_2045262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029828735.1|2045258_2045702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029828737.1|2045698_2045917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033482666.1|2045913_2046669_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029828741.1|2046672_2047581_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	33.9	3.1e-43
>prophage 3
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	2067661	2088848	5364172	capsid,tail,portal,head	Xanthomonas_phage(23.08%)	19	NA	NA
WP_029828818.1|2067661_2068318_+	glycoside hydrolase family 19 protein	NA	A0A248XCW5	Klebsiella_phage	44.5	2.4e-37
WP_050595539.1|2068314_2068818_+	hypothetical protein	NA	Q2NPA5	Xanthomonas_phage	40.0	1.6e-20
WP_029828821.1|2068814_2069093_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029828829.1|2070599_2072687_+	DNA packaging protein	NA	A5LH27	Enterobacteria_phage	42.5	2.3e-153
WP_029828831.1|2072688_2072904_+	hypothetical protein	NA	B7SYD5	Stenotrophomonas_phage	41.9	8.0e-06
WP_033482662.1|2072896_2074399_+|portal	phage portal protein	portal	A0A2H4JFL5	uncultured_Caudovirales_phage	48.3	4.2e-109
WP_029828834.1|2074388_2075792_+	S49 family peptidase	NA	K4HZZ6	Acidithiobacillus_phage	45.9	1.2e-41
WP_033482660.1|2075794_2076466_+|head	head decoration protein	head	NA	NA	NA	NA
WP_050595538.1|2076537_2077542_+|capsid	major capsid protein	capsid	A0A2H4J890	uncultured_Caudovirales_phage	40.8	1.6e-56
WP_029828838.1|2077589_2078366_+	hypothetical protein	NA	A0A291AUT0	Sinorhizobium_phage	34.9	7.3e-25
WP_029828840.1|2078362_2078683_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029828843.1|2078675_2079107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029828844.1|2079146_2079890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029828845.1|2079886_2080366_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029828847.1|2080527_2083245_+|tail	phage tail tape measure protein	tail	C4ML16	Xanthomonas_virus	34.0	2.4e-94
WP_029828849.1|2083244_2083601_+	hypothetical protein	NA	Q52PL1	Xanthomonas_phage	44.4	1.6e-19
WP_029828851.1|2083597_2084065_+	DUF1833 family protein	NA	Q52PL0	Xanthomonas_phage	46.5	8.0e-35
WP_029828853.1|2084064_2084457_+	hypothetical protein	NA	Q2NPH1	Xanthomonas_virus	52.8	4.1e-32
WP_033482658.1|2084447_2088848_+	hypothetical protein	NA	C4ML20	Xanthomonas_virus	50.7	0.0e+00
>prophage 4
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	2592903	2600855	5364172	coat	Xanthomonas_phage(60.0%)	14	NA	NA
WP_016850840.1|2592903_2593593_+	hypothetical protein	NA	A0A1D6ZIU8	Xanthomonas_phage	44.1	3.8e-25
WP_080683255.1|2594349_2594838_-	DUF3693 domain-containing protein	NA	A0A077JCZ5	Xanthomonas_phage	94.6	8.0e-62
WP_033482628.1|2594965_2595190_+	hypothetical protein	NA	A0A1W6DXK4	Xanthomonas_phage	89.9	8.0e-25
WP_033482627.1|2595352_2595532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033482625.1|2595524_2596631_+	replication protein	NA	S0F3I3	Stenotrophomonas_phage	75.1	1.0e-160
WP_033482623.1|2596627_2596924_+	single-stranded DNA-binding protein	NA	B1NI78	Stenotrophomonas_phage	65.6	1.5e-26
WP_080683254.1|2596955_2597087_+|coat	coat protein	coat	NA	NA	NA	NA
WP_075241185.1|2597062_2597179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_033482619.1|2597207_2597336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005918124.1|2598224_2598464_+	hypothetical protein	NA	Q9XJ91	Xanthomonas_phage	97.5	7.4e-37
WP_029219915.1|2598474_2598795_+|coat	minor coat protein	coat	Q4LAU3	Stenotrophomonas_phage	46.2	1.5e-21
WP_033482614.1|2598796_2600119_+	filamentous phage phiLf protein I	NA	Q4LAU4	Stenotrophomonas_phage	55.2	2.4e-129
WP_033482613.1|2600138_2600450_-	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	89.3	2.1e-47
WP_033482610.1|2600516_2600855_-	phage-like protein	NA	Q38057	Xanthomonas_phage	81.2	7.1e-49
>prophage 5
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	2715483	2792295	5364172	transposase,integrase,plate	uncultured_Caudovirales_phage(42.86%)	60	2738808:2738823	2794060:2794075
WP_029996207.1|2715483_2716446_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_144367964.1|2717260_2718184_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_078565718.1|2718177_2718840_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_078565720.1|2718842_2719259_+	NUDIX domain-containing protein	NA	A0A1Q2U351	Vibrio_phage	52.7	1.2e-05
WP_080671030.1|2719255_2719861_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_080683252.1|2719880_2721227_+	MFS transporter	NA	NA	NA	NA	NA
WP_029996211.1|2721387_2721834_+	TIGR03757 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_029996212.1|2721830_2722787_+	TIGR03756 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_029996213.1|2722797_2724192_+	integrating conjugative element protein	NA	NA	NA	NA	NA
WP_029996214.1|2724188_2724536_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029996217.1|2724551_2726069_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
WP_029996218.1|2726080_2726446_-	DUF3742 family protein	NA	NA	NA	NA	NA
WP_033482571.1|2726531_2727164_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_015471990.1|2727176_2727803_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033482567.1|2728118_2730044_+	DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_033482565.1|2730088_2730487_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033482563.1|2730488_2731520_-	hypothetical protein	NA	NA	NA	NA	NA
WP_046736019.1|2731834_2732707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_124944755.1|2732681_2734874_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.0	2.1e-24
WP_033482557.1|2734876_2735773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029996225.1|2735780_2736392_-	hypothetical protein	NA	NA	NA	NA	NA
2738808:2738823	attL	CAGATAGCCGGCACGC	NA	NA	NA	NA
WP_029996226.1|2739057_2740005_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_144367965.1|2740017_2742765_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.0	4.9e-39
WP_029996228.1|2742857_2743211_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029996229.1|2743242_2745981_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	29.6	1.2e-90
WP_029996230.1|2746066_2747158_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_029996231.1|2747121_2748957_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_019302186.1|2748959_2749448_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_003467612.1|2749595_2750093_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_029996232.1|2750234_2751731_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_029996233.1|2751734_2752235_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_033482858.1|2752280_2752769_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029996235.1|2753151_2753760_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_033482828.1|2753912_2755247_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_033482826.1|2755246_2756035_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_070996154.1|2756045_2758781_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_080683264.1|2758777_2759749_+	hypothetical protein	NA	NA	NA	NA	NA
WP_124944756.1|2759729_2760305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_081341543.1|2760313_2762764_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_080683262.1|2762823_2764308_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029996241.1|2764304_2765384_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108722835.1|2765528_2765612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002801620.1|2766008_2766290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033482817.1|2767628_2770037_-	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_080671059.1|2770033_2770600_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_046831203.1|2770820_2771357_-	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_029996245.1|2771353_2772310_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_033482815.1|2772324_2775144_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.1	1.2e-53
WP_033482813.1|2775957_2777031_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_033482811.1|2777081_2777876_-	OmpA family protein	NA	NA	NA	NA	NA
WP_029996250.1|2777872_2778856_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_029996251.1|2778852_2782590_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_029996252.1|2782605_2784051_-	membrane protein	NA	NA	NA	NA	NA
WP_029996253.1|2784110_2784371_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_029996254.1|2784481_2785360_-	M15 family metallopeptidase	NA	A8ATW4	Listeria_phage	36.5	1.3e-06
WP_029996255.1|2785565_2786285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_029996258.1|2788335_2789220_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_033482809.1|2789247_2789541_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_080683261.1|2789643_2790294_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_033482807.1|2790360_2792295_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A0U1UNT3	Pseudomonas_phage	48.0	7.0e-101
2794060:2794075	attR	CAGATAGCCGGCACGC	NA	NA	NA	NA
>prophage 6
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	3807117	3926082	5364172	plate,head,tRNA,capsid,transposase,terminase,integrase,holin,tail,portal	Stenotrophomonas_phage(44.68%)	116	3848110:3848154	3886137:3886181
WP_003482499.1|3807117_3807837_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_003482501.1|3807850_3809875_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	33.0	6.7e-94
WP_003482503.1|3810148_3810673_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003482504.1|3810686_3813131_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
WP_029829319.1|3813370_3815455_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_080573042.1|3815463_3815796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029829321.1|3815811_3817254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029829322.1|3817515_3819702_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_078585717.1|3819992_3820073_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA	NA
WP_003482510.1|3820156_3821056_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA	NA
WP_005921461.1|3821052_3821805_+	pyrroloquinoline-quinone synthase PqqC	NA	NA	NA	NA	NA
WP_016849287.1|3821801_3822080_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA	NA
WP_003482516.1|3822076_3823195_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA	NA
WP_015463489.1|3823257_3823770_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016849289.1|3824206_3825721_+	PhoPQ-regulated protein	NA	NA	NA	NA	NA
WP_016849290.1|3826021_3827056_+	ROK family protein	NA	NA	NA	NA	NA
WP_016849291.1|3827156_3829793_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_029829327.1|3830009_3834131_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SDF7	Indivirus	28.4	2.0e-44
WP_003482535.1|3834233_3834782_+	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	32.4	1.5e-16
WP_011052052.1|3835262_3837059_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	1.5e-81
WP_005913671.1|3837197_3837695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016851165.1|3837773_3838178_+	response regulator	NA	NA	NA	NA	NA
WP_005913667.1|3839443_3839554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011052054.1|3839645_3840356_-	RNA-binding protein S4	NA	NA	NA	NA	NA
WP_016851168.1|3840564_3840771_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078585719.1|3840922_3841237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851169.1|3841281_3843450_+	methyl-accepting chemotaxis protein	NA	NA	NA	NA	NA
WP_026007238.1|3843815_3844442_-	amino acid transporter	NA	NA	NA	NA	NA
WP_016851171.1|3844543_3845446_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_003482555.1|3845718_3846078_-	response regulator	NA	NA	NA	NA	NA
WP_016851172.1|3846074_3847082_-	PAS domain-containing protein	NA	NA	NA	NA	NA
WP_016851173.1|3847356_3848031_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A088F6S9	Vibrio_phage	33.8	4.1e-24
3848110:3848154	attL	CTTTTAATCTTTTGGTCGATGGTTCGAATCCATCACGGCCCACCA	NA	NA	NA	NA
WP_026007239.1|3848299_3849499_-|integrase	tyrosine-type recombinase/integrase	integrase	V9IQN0	Stenotrophomonas_phage	53.5	2.3e-118
WP_011038128.1|3849498_3849759_-	hypothetical protein	NA	V9IQX6	Stenotrophomonas_phage	58.3	2.2e-18
WP_016851176.1|3849716_3849923_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851177.1|3849919_3850192_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851178.1|3850188_3850434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026007240.1|3850430_3850706_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851181.1|3850867_3851278_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851182.1|3851356_3851620_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080573080.1|3851616_3851841_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851184.1|3851891_3852110_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080573081.1|3852403_3855067_-	bifunctional DNA primase/helicase	NA	V9IQW5	Stenotrophomonas_phage	69.9	0.0e+00
WP_011038118.1|3855094_3855334_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011038117.1|3855330_3855456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080573074.1|3855634_3855946_-	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	57.0	5.0e-25
WP_016851187.1|3855952_3856207_-	DNA-binding protein	NA	A0A1B0VRL1	Pseudomonas_phage	46.7	2.2e-07
WP_026007241.1|3856273_3856702_+	helix-turn-helix transcriptional regulator	NA	A4JWR8	Burkholderia_virus	42.8	1.4e-17
WP_080573075.1|3857008_3857473_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080573076.1|3857477_3857816_-	STAS-like domain-containing protein	NA	A0A2H4J4X6	uncultured_Caudovirales_phage	32.0	1.8e-07
WP_080573077.1|3857781_3858729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851189.1|3859015_3860002_-	phage late control D family protein	NA	V9IQM7	Stenotrophomonas_phage	55.1	4.0e-92
WP_016851190.1|3859998_3860400_-|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	59.1	2.5e-37
WP_029996349.1|3860412_3863283_-|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	46.6	5.2e-185
WP_005922203.1|3863312_3863426_-|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_029996350.1|3863434_3863737_-|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	66.3	1.4e-24
WP_016851197.1|3863782_3864292_-|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	78.1	5.8e-71
WP_016851114.1|3864322_3865489_-|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	64.5	2.6e-135
WP_016851115.1|3865500_3865860_-|plate	phage baseplate protein	plate	V9IQW0	Stenotrophomonas_phage	64.4	1.6e-35
WP_016851116.1|3865856_3866420_-|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	48.6	7.4e-27
WP_080573069.1|3866498_3866774_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851118.1|3866727_3867933_-	hypothetical protein	NA	A0A1S5NTG6	Burkholderia_phage	46.2	9.6e-32
WP_026007225.1|3867936_3868485_-|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	52.6	7.9e-50
WP_016851120.1|3868477_3869368_-|plate	baseplate assembly protein	plate	V9IQV9	Stenotrophomonas_phage	53.7	4.7e-84
WP_042761698.1|3869774_3870248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_080573070.1|3870259_3871084_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016851121.1|3871256_3871712_-	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	59.0	1.3e-37
WP_016851122.1|3871699_3872119_-|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	64.4	7.4e-40
WP_016851123.1|3872115_3872604_-	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	52.4	5.8e-28
WP_080671044.1|3872603_3873245_-	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	60.9	1.3e-48
WP_005922189.1|3873241_3873517_-|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	1.3e-21
WP_005917737.1|3873509_3873866_-	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	5.9e-22
WP_005917735.1|3873870_3874080_-|tail	tail protein	tail	K4PAW7	Burkholderia_phage	59.4	7.0e-15
WP_029996352.1|3874079_3874547_-|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	50.3	1.4e-31
WP_016851435.1|3874645_3875365_-|terminase	terminase	terminase	Q9ZXM2	Pseudomonas_virus	62.5	1.0e-68
WP_029996353.1|3875368_3876385_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	71.1	8.4e-138
WP_029996354.1|3876431_3877274_-|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	52.7	1.4e-66
WP_033483117.1|3877395_3879180_+|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	76.8	6.6e-271
WP_029996356.1|3879179_3880202_+|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	71.8	3.1e-140
WP_053503138.1|3880227_3880473_+	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	51.2	4.1e-14
WP_029996358.1|3880390_3881086_+	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	77.8	1.1e-107
WP_016851201.1|3881117_3881585_-	DUF4411 family protein	NA	NA	NA	NA	NA
WP_050595578.1|3881584_3882811_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_016850467.1|3884817_3885303_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A218MND2	uncultured_virus	38.7	1.1e-13
WP_011038085.1|3885646_3885982_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016850466.1|3886418_3887102_-	7-carboxy-7-deazaguanine synthase QueE	NA	J9PV61	Bacillus_phage	41.0	3.0e-38
3886137:3886181	attR	CTTTTAATCTTTTGGTCGATGGTTCGAATCCATCACGGCCCACCA	NA	NA	NA	NA
WP_011052060.1|3887144_3887963_-	tol-pal system protein YbgF	NA	NA	NA	NA	NA
WP_003482562.1|3887969_3888488_-	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_003482565.1|3888545_3889865_-	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA	NA
WP_029829330.1|3890050_3891091_-	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_016849299.1|3891080_3891530_-	protein TolR	NA	NA	NA	NA	NA
WP_003482569.1|3891687_3892467_-	protein TolQ	NA	NA	NA	NA	NA
WP_033483113.1|3892478_3892937_-	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_003482572.1|3892989_3894030_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	28.2	2.7e-06
WP_016849298.1|3894069_3894300_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005921446.1|3894302_3896207_-	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	33.7	3.7e-78
WP_003482577.1|3896403_3896988_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_003482580.1|3897106_3897631_-	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
WP_003482581.1|3897760_3898489_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_029829331.1|3898578_3899256_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_005913643.1|3899353_3899881_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_016850983.1|3900303_3902070_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_029829333.1|3902228_3902972_+	DUF3011 domain-containing protein	NA	NA	NA	NA	NA
WP_016850980.1|3903919_3904204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_026007196.1|3904361_3904901_-	plasmid pRiA4b ORF-3 family protein	NA	A0A2H4PDG5	Mycobacterium_phage	34.9	9.6e-24
WP_098477664.1|3905173_3906276_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	7.7e-44
WP_087943921.1|3907289_3908434_-|transposase	IS3-like element ISXac3 family transposase	transposase	U5P429	Shigella_phage	59.6	5.6e-90
WP_124632122.1|3908983_3909379_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_070996149.1|3909764_3913259_+	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
WP_070996147.1|3913566_3914097_-	hypothetical protein	NA	NA	NA	NA	NA
WP_087943921.1|3914247_3915392_-|transposase	IS3-like element ISXac3 family transposase	transposase	U5P429	Shigella_phage	59.6	5.6e-90
WP_124632122.1|3915941_3916337_-	NYN domain-containing protein	NA	NA	NA	NA	NA
WP_081341541.1|3916722_3919911_+	Avirulence protein AvrBs3	NA	NA	NA	NA	NA
WP_124632114.1|3920218_3920710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016849980.1|3922273_3923821_-	HAD hydrolase-like protein	NA	NA	NA	NA	NA
WP_016849979.1|3925119_3926082_+|transposase	IS1595-like element IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP041781	Xanthomonas citri pv. glycines strain 8ra chromosome, complete genome	5364172	4447760	4459530	5364172		Enterobacteria_phage(37.5%)	11	NA	NA
WP_005913455.1|4447760_4449107_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	27.1	7.5e-33
WP_016850199.1|4449153_4450557_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.0	6.5e-48
WP_016850197.1|4450839_4452006_-	nucleotide sugar dehydrogenase	NA	M1HZB2	Paramecium_bursaria_Chlorella_virus	58.1	2.7e-116
WP_029829443.1|4452346_4453246_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.7	4.1e-27
WP_016851441.1|4453242_4453800_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.9	6.6e-44
WP_005913450.1|4453796_4454684_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	57.5	8.5e-94
WP_005920787.1|4454735_4455791_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.4	8.0e-83
WP_016851442.1|4456010_4456757_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_016851443.1|4456756_4457701_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_005920793.1|4457864_4458593_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005913435.1|4458573_4459530_+	glycosyltransferase family 2 protein	NA	A0A192Y8W7	Salmonella_phage	27.1	1.8e-25
