assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007559065.1_ASM755906v1	NZ_CP041774	Pseudomonas aeruginosa strain 60503 chromosome, complete genome	1	355887-356000	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	GGCCAAAGAACTGGAGGGCAAGGTATGA	28	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA|50aa|down_1|NZ_CP041774.1_359427_359577_-,NA|168aa|down_3|NZ_CP041774.1_360572_361076_-,NA|251aa|down_6|NZ_CP041774.1_362829_363582_-,NA|185aa|down_8|NZ_CP041774.1_364350_364905_-	NA|293aa|up_9|NZ_CP041774.1_342736_343615_-	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase	NA|222aa|up_8|NZ_CP041774.1_343776_344442_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|354aa|up_7|NZ_CP041774.1_344502_345564_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|459aa|up_6|NZ_CP041774.1_345819_347196_-	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|251aa|up_5|NZ_CP041774.1_347474_348227_+	pfam07722, Peptidase_C26, Peptidase C26	NA|453aa|up_4|NZ_CP041774.1_348267_349626_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|457aa|up_3|NZ_CP041774.1_349691_351062_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|368aa|up_2|NZ_CP041774.1_351177_352281_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|366aa|up_1|NZ_CP041774.1_352699_353797_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|up_0|NZ_CP041774.1_353851_355006_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG	NA|796aa|down_0|NZ_CP041774.1_357043_359431_-	COG2366, COG2366, Protein related to penicillin acylase [General function prediction only]	NA|50aa|down_1|NZ_CP041774.1_359427_359577_-	NA	NA|351aa|down_2|NZ_CP041774.1_359541_360594_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|168aa|down_3|NZ_CP041774.1_360572_361076_-	NA	NA|204aa|down_4|NZ_CP041774.1_361180_361792_-	cd02969, PRX_like1, Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs	NA|340aa|down_5|NZ_CP041774.1_361790_362810_+	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|251aa|down_6|NZ_CP041774.1_362829_363582_-	NA	NA|233aa|down_7|NZ_CP041774.1_363630_364329_+	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones]	NA|185aa|down_8|NZ_CP041774.1_364350_364905_-	NA	NA|165aa|down_9|NZ_CP041774.1_365170_365665_+	COG1683, COG1683, Uncharacterized conserved protein [Function unknown]
GCF_007559065.1_ASM755906v1	NZ_CP041774	Pseudomonas aeruginosa strain 60503 chromosome, complete genome	2	4450232-4450810	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Type I-E	CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC,CGGTTCATCCCCACGCATGTGGGGAACAC	29,29,29	1	1	4450749-4450781	NZ_CP041774.1_4197089-4197057	I-E,II-B:I-E,II-B:I-E,II-B	9,9,9	9	TypeI-E	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA|80aa|up_6|NZ_CP041774.1_4442394_4442634_+,NA|41aa|up_5|NZ_CP041774.1_4442741_4442864_-,NA|415aa|up_1|NZ_CP041774.1_4447472_4448717_-,NA	NA|542aa|up_9|NZ_CP041774.1_4438782_4440408_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|132aa|up_8|NZ_CP041774.1_4440420_4440816_-	pfam02974, Inh, Protease inhibitor Inh	NA|480aa|up_7|NZ_CP041774.1_4441062_4442502_-	pfam08548, Peptidase_M10_C, Peptidase M10 serralysin C terminal	NA|80aa|up_6|NZ_CP041774.1_4442394_4442634_+	NA	NA|41aa|up_5|NZ_CP041774.1_4442741_4442864_-	NA	NA|482aa|up_4|NZ_CP041774.1_4442860_4444306_-	TIGR01844, Proteases_secretion_protein_PrtF, type I secretion outer membrane protein, TolC family	NA|433aa|up_3|NZ_CP041774.1_4444309_4445608_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|594aa|up_2|NZ_CP041774.1_4445604_4447386_-	TIGR01842, Proteases_secretion_ATP-binding_protein_PrtD, type I secretion system ABC transporter, PrtD family	NA|415aa|up_1|NZ_CP041774.1_4447472_4448717_-	NA	NA|114aa|up_0|NZ_CP041774.1_4449731_4450073_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|down_0|NZ_CP041774.1_4450874_4451174_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|down_1|NZ_CP041774.1_4451170_4452061_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|down_2|NZ_CP041774.1_4452087_4452699_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|down_3|NZ_CP041774.1_4452673_4453336_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|down_4|NZ_CP041774.1_4453337_4454480_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|down_5|NZ_CP041774.1_4454489_4455020_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|down_6|NZ_CP041774.1_4455016_4456585_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|down_7|NZ_CP041774.1_4456587_4459260_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|83aa|down_8|NZ_CP041774.1_4459732_4459981_+	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|859aa|down_9|NZ_CP041774.1_4461006_4463583_+	PRK13557, PRK13557, histidine kinase; Provisional
GCF_007559065.1_ASM755906v1	NZ_CP041774	Pseudomonas aeruginosa strain 60503 chromosome, complete genome	3	4459983-4460746	2,3,2	CRT,CRISPRCasFinder,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Type I-E	CGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC,CGGTTCATCCCCACACCCGTGGGGAACAC	29,29,29	0	0	NA	NA	I-E,II-B:I-E,II-B:I-E,II-B	12,11,10	12	TypeI-E	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|114aa|up_9|NZ_CP041774.1_4449731_4450073_+	pfam18226, QslA_E, LasR-specific antiactivator QslA chain E	cas2|100aa|up_8|NZ_CP041774.1_4450874_4451174_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|297aa|up_7|NZ_CP041774.1_4451170_4452061_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|204aa|up_6|NZ_CP041774.1_4452087_4452699_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|up_5|NZ_CP041774.1_4452673_4453336_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|381aa|up_4|NZ_CP041774.1_4453337_4454480_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|177aa|up_3|NZ_CP041774.1_4454489_4455020_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|523aa|up_2|NZ_CP041774.1_4455016_4456585_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cas3|891aa|up_1|NZ_CP041774.1_4456587_4459260_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|83aa|up_0|NZ_CP041774.1_4459732_4459981_+	pfam05015, HigB-like_toxin, RelE-like toxin of type II toxin-antitoxin system HigB	NA|859aa|down_0|NZ_CP041774.1_4461006_4463583_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|591aa|down_1|NZ_CP041774.1_4463605_4465378_-	cd00306, Peptidases_S8_S53, Peptidase domain in the S8 and S53 families	NA|187aa|down_2|NZ_CP041774.1_4465457_4466018_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|266aa|down_3|NZ_CP041774.1_4466182_4466980_+	PRK06563, PRK06563, crotonase/enoyl-CoA hydratase family protein	NA|295aa|down_4|NZ_CP041774.1_4467036_4467921_+	COG4757, COG4757, Predicted alpha/beta hydrolase [General function prediction only]	NA|483aa|down_5|NZ_CP041774.1_4468303_4469752_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|384aa|down_6|NZ_CP041774.1_4469748_4470900_+	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|504aa|down_7|NZ_CP041774.1_4470889_4472401_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|261aa|down_8|NZ_CP041774.1_4472403_4473186_-	cd06124, cupin_NimR-like_N, AraC/XylS family transcriptional regulators similar to NimR, N-terminal cupin domain	NA|168aa|down_9|NZ_CP041774.1_4473377_4473881_+	pfam14595, Thioredoxin_9, Thioredoxin
GCF_007559065.1_ASM755906v1	NZ_CP041774	Pseudomonas aeruginosa strain 60503 chromosome, complete genome	4	5488552-5488652	4	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	GGGTACAGAAACTGTACCCATGGAG	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA|177aa|up_5|NZ_CP041774.1_5485601_5486132_-,NA|139aa|up_3|NZ_CP041774.1_5486450_5486867_+,NA|78aa|up_2|NZ_CP041774.1_5486859_5487093_+,NA|90aa|up_1|NZ_CP041774.1_5487089_5487359_+,NA|101aa|up_0|NZ_CP041774.1_5487355_5487658_+,NA|138aa|down_2|NZ_CP041774.1_5490298_5490712_+,NA|81aa|down_5|NZ_CP041774.1_5493180_5493423_-,NA|79aa|down_6|NZ_CP041774.1_5493742_5493979_+,NA|79aa|down_7|NZ_CP041774.1_5494116_5494353_-	NA|189aa|up_9|NZ_CP041774.1_5480063_5480630_-	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA|752aa|up_8|NZ_CP041774.1_5480780_5483036_-	pfam07793, DUF1631, Protein of unknown function (DUF1631)	NA|283aa|up_7|NZ_CP041774.1_5483321_5484170_+	PRK05742, PRK05742, carboxylating nicotinate-nucleotide diphosphorylase	NA|405aa|up_6|NZ_CP041774.1_5484390_5485605_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|177aa|up_5|NZ_CP041774.1_5485601_5486132_-	NA	NA|67aa|up_4|NZ_CP041774.1_5486253_5486454_+	pfam12728, HTH_17, Helix-turn-helix domain	NA|139aa|up_3|NZ_CP041774.1_5486450_5486867_+	NA	NA|78aa|up_2|NZ_CP041774.1_5486859_5487093_+	NA	NA|90aa|up_1|NZ_CP041774.1_5487089_5487359_+	NA	NA|101aa|up_0|NZ_CP041774.1_5487355_5487658_+	NA	NA|112aa|down_0|NZ_CP041774.1_5488880_5489216_+	pfam12307, DUF3631, Protein of unknown function (DUF3631)	NA|299aa|down_1|NZ_CP041774.1_5489271_5490168_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|138aa|down_2|NZ_CP041774.1_5490298_5490712_+	NA	NA|192aa|down_3|NZ_CP041774.1_5490862_5491438_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|169aa|down_4|NZ_CP041774.1_5492214_5492721_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|81aa|down_5|NZ_CP041774.1_5493180_5493423_-	NA	NA|79aa|down_6|NZ_CP041774.1_5493742_5493979_+	NA	NA|79aa|down_7|NZ_CP041774.1_5494116_5494353_-	NA	NA|921aa|down_8|NZ_CP041774.1_5494381_5497144_-	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]	NA|383aa|down_9|NZ_CP041774.1_5497158_5498307_-	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]
GCF_007559065.1_ASM755906v1	NZ_CP041774	Pseudomonas aeruginosa strain 60503 chromosome, complete genome	5	6018701-6018793	5	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	GCCGACAACGGCAGCGAGCAGACC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,PD-DExK,WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA|249aa|up_9|NZ_CP041774.1_6009178_6009925_+,NA|208aa|down_2|NZ_CP041774.1_6020389_6021013_-	NA|249aa|up_9|NZ_CP041774.1_6009178_6009925_+	NA	NA|288aa|up_8|NZ_CP041774.1_6009931_6010795_-	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|422aa|up_7|NZ_CP041774.1_6011002_6012268_+	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins	NA|139aa|up_6|NZ_CP041774.1_6012442_6012859_-	PRK11505, PRK11505, phosphate starvation-inducible protein PsiF	NA|180aa|up_5|NZ_CP041774.1_6013013_6013553_+	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown]	NA|115aa|up_4|NZ_CP041774.1_6013641_6013986_+	PRK11251, PRK11251, osmotically-inducible lipoprotein OsmE	NA|136aa|up_3|NZ_CP041774.1_6014029_6014437_-	pfam07498, Rho_N, Rho termination factor, N-terminal domain	NA|271aa|up_2|NZ_CP041774.1_6014583_6015396_+	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|690aa|up_1|NZ_CP041774.1_6015397_6017467_-	COG2982, AsmA, Uncharacterized protein involved in outer membrane biogenesis [Cell envelope biogenesis, outer membrane]	NA|178aa|up_0|NZ_CP041774.1_6017762_6018296_+	COG2193, Bfr, Bacterioferritin (cytochrome b1) [Inorganic ion transport and metabolism]	NA|256aa|down_0|NZ_CP041774.1_6018957_6019725_-	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains	NA|205aa|down_1|NZ_CP041774.1_6019721_6020336_-	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion]	NA|208aa|down_2|NZ_CP041774.1_6020389_6021013_-	NA	NA|230aa|down_3|NZ_CP041774.1_6021150_6021840_+	TIGR01387, Transcriptional_regulatory_protein_PcoR, heavy metal response regulator	NA|464aa|down_4|NZ_CP041774.1_6021818_6023210_+	TIGR01386, Probable_sensor_protein_PcoS, heavy metal sensor kinase	NA|439aa|down_5|NZ_CP041774.1_6023200_6024517_-	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|371aa|down_6|NZ_CP041774.1_6024736_6025849_-	COG3239, DesA, Fatty acid desaturase [Lipid metabolism]	NA|367aa|down_7|NZ_CP041774.1_6025845_6026946_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|210aa|down_8|NZ_CP041774.1_6027104_6027734_+	PRK11202, PRK11202, HTH-type transcriptional repressor FabR	NA|168aa|down_9|NZ_CP041774.1_6027963_6028467_+	PRK13261, ureE, urease accessory protein UreE; Provisional
