assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007556815.1_ASM755681v1	NZ_CP041743	Paraburkholderia megapolitana strain LMG 23650 chromosome 1, complete sequence	1	309614-309844	1	PILER-CR	no		cas3,RT,WYL,csa3,PD-DExK	Orphan	TGTTGCCATCACCGTGGACGTTGCTGTCGGCACTCGTACTCAGGTCGTTGT	51	1	1	309755-309809	NZ_CP041743.1_309199-309253	NA	2	2	Orphan	cas3,RT,WYL,csa3,PD-DExK,DinG,DEDDh	NA|86aa|up_9|NZ_CP041743.1_296432_296690_-,NA|120aa|up_3|NZ_CP041743.1_302749_303109_+,NA|69aa|down_4|NZ_CP041743.1_317860_318067_+	NA|86aa|up_9|NZ_CP041743.1_296432_296690_-	NA	NA|371aa|up_8|NZ_CP041743.1_297021_298134_+	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|244aa|up_7|NZ_CP041743.1_298214_298946_-	pfam17939, TetR_C_30, Tetracyclin repressor-like, C-terminal domain	NA|413aa|up_6|NZ_CP041743.1_299139_300378_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|444aa|up_5|NZ_CP041743.1_300442_301774_+	PLN02856, PLN02856, fumarylacetoacetase	NA|258aa|up_4|NZ_CP041743.1_301808_302582_+	pfam04199, Cyclase, Putative cyclase	NA|120aa|up_3|NZ_CP041743.1_302749_303109_+	NA	NA|562aa|up_2|NZ_CP041743.1_303105_304791_+	cd00538, PA, PA: Protease-associated (PA) domain	NA|178aa|up_1|NZ_CP041743.1_304881_305415_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|397aa|up_0|NZ_CP041743.1_305408_306599_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|267aa|down_0|NZ_CP041743.1_312707_313508_-	PRK10808, PRK10808, outer membrane protein A; Reviewed	NA|321aa|down_1|NZ_CP041743.1_314254_315217_-	PRK02190, PRK02190, agmatinase; Provisional	NA|497aa|down_2|NZ_CP041743.1_315351_316842_-	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like	NA|184aa|down_3|NZ_CP041743.1_316887_317439_-	PRK09943, PRK09943, HTH-type transcriptional regulator PuuR	NA|69aa|down_4|NZ_CP041743.1_317860_318067_+	NA	NA|259aa|down_5|NZ_CP041743.1_318347_319124_+	pfam07722, Peptidase_C26, Peptidase C26	NA|445aa|down_6|NZ_CP041743.1_319188_320523_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|478aa|down_7|NZ_CP041743.1_320560_321994_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|378aa|down_8|NZ_CP041743.1_322076_323210_+	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|385aa|down_9|NZ_CP041743.1_323445_324600_+	PRK11607, potG, putrescine ABC transporter ATP-binding subunit PotG
GCF_007556815.1_ASM755681v1	NZ_CP041743	Paraburkholderia megapolitana strain LMG 23650 chromosome 1, complete sequence	2	1215032-1215131	1	CRISPRCasFinder	no		cas3,RT,WYL,csa3,PD-DExK	Orphan	ACGAGCCTGTCGAGTTCGACGTCGA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,WYL,csa3,PD-DExK,DinG,DEDDh	NA,NA|199aa|down_2|NZ_CP041743.1_1224482_1225079_+	NA|403aa|up_9|NZ_CP041743.1_1201600_1202809_+	COG2828, COG2828, Uncharacterized protein conserved in bacteria [Function unknown]	NA|456aa|up_8|NZ_CP041743.1_1202832_1204200_+	pfam03972, MmgE_PrpD, MmgE/PrpD family	NA|302aa|up_7|NZ_CP041743.1_1204213_1205119_+	cd00377, ICL_PEPM, Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage	NA|470aa|up_6|NZ_CP041743.1_1205115_1206525_+	PRK12466, PRK12466, 3-isopropylmalate dehydratase large subunit	NA|212aa|up_5|NZ_CP041743.1_1206517_1207153_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|489aa|up_4|NZ_CP041743.1_1207211_1208678_+	pfam03972, MmgE_PrpD, MmgE/PrpD family	NA|486aa|up_3|NZ_CP041743.1_1208711_1210169_+	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|278aa|up_2|NZ_CP041743.1_1210193_1211027_-	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|243aa|up_1|NZ_CP041743.1_1211171_1211900_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|278aa|up_0|NZ_CP041743.1_1212013_1212847_-	cd01948, EAL, EAL domain	NA|387aa|down_0|NZ_CP041743.1_1222165_1223326_+	pfam10933, DUF2827, Protein of unknown function (DUF2827)	NA|386aa|down_1|NZ_CP041743.1_1223328_1224486_+	pfam10933, DUF2827, Protein of unknown function (DUF2827)	NA|199aa|down_2|NZ_CP041743.1_1224482_1225079_+	NA	NA|159aa|down_3|NZ_CP041743.1_1225131_1225608_+	pfam13211, DUF4019, Protein of unknown function (DUF4019)	NA|376aa|down_4|NZ_CP041743.1_1225604_1226732_+	pfam10933, DUF2827, Protein of unknown function (DUF2827)	NA|605aa|down_5|NZ_CP041743.1_1226819_1228634_+	sd00006, TPR, Tetratricopeptide repeat	NA|266aa|down_6|NZ_CP041743.1_1228743_1229541_+	pfam13489, Methyltransf_23, Methyltransferase domain	NA|422aa|down_7|NZ_CP041743.1_1229569_1230835_+	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|225aa|down_8|NZ_CP041743.1_1230925_1231600_-	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA	NA|229aa|down_9|NZ_CP041743.1_1232184_1232871_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_007556815.1_ASM755681v1	NZ_CP041744	Paraburkholderia megapolitana strain LMG 23650 plasmid unnamed1, complete sequence	1	44583-44726	1	PILER-CR	no			Orphan	CTGCGTTGTGTCAAACTCTATT	22	0	0	NA	NA	NA	2	2	Orphan	cas3,RT,WYL,csa3,PD-DExK,DinG,DEDDh	NA|166aa|up_9|NZ_CP041744.1_35431_35929_+,NA|73aa|up_7|NZ_CP041744.1_37172_37391_+,NA|142aa|up_6|NZ_CP041744.1_37701_38127_+,NA|146aa|up_5|NZ_CP041744.1_38403_38841_+,NA|135aa|up_4|NZ_CP041744.1_39054_39459_-,NA|352aa|up_0|NZ_CP041744.1_43407_44463_+,NA|153aa|down_0|NZ_CP041744.1_44737_45196_+,NA|124aa|down_1|NZ_CP041744.1_45207_45579_+,NA|69aa|down_2|NZ_CP041744.1_45640_45847_+,NA|156aa|down_3|NZ_CP041744.1_45843_46311_+,NA|166aa|down_4|NZ_CP041744.1_46258_46756_-,NA|167aa|down_5|NZ_CP041744.1_46854_47355_-	NA|166aa|up_9|NZ_CP041744.1_35431_35929_+	NA	NA|212aa|up_8|NZ_CP041744.1_36528_37164_+	smart00974, T5orf172, This entry represents the putative helicase A859L	NA|73aa|up_7|NZ_CP041744.1_37172_37391_+	NA	NA|142aa|up_6|NZ_CP041744.1_37701_38127_+	NA	NA|146aa|up_5|NZ_CP041744.1_38403_38841_+	NA	NA|135aa|up_4|NZ_CP041744.1_39054_39459_-	NA	NA|209aa|up_3|NZ_CP041744.1_39648_40275_+	cd01188, INT_RitA_C_like, C-terminal catalytic domain of recombinase RitA, a component of the recombinase trio	NA|197aa|up_2|NZ_CP041744.1_40392_40983_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|368aa|up_1|NZ_CP041744.1_41188_42292_+	COG0150, PurM, Phosphoribosylaminoimidazole (AIR) synthetase [Nucleotide transport and metabolism]	NA|352aa|up_0|NZ_CP041744.1_43407_44463_+	NA	NA|153aa|down_0|NZ_CP041744.1_44737_45196_+	NA	NA|124aa|down_1|NZ_CP041744.1_45207_45579_+	NA	NA|69aa|down_2|NZ_CP041744.1_45640_45847_+	NA	NA|156aa|down_3|NZ_CP041744.1_45843_46311_+	NA	NA|166aa|down_4|NZ_CP041744.1_46258_46756_-	NA	NA|167aa|down_5|NZ_CP041744.1_46854_47355_-	NA	NA|775aa|down_6|NZ_CP041744.1_47347_49672_-	COG4688, COG4688, Uncharacterized protein conserved in bacteria [Function unknown]	NA|514aa|down_7|NZ_CP041744.1_49671_51213_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|410aa|down_8|NZ_CP041744.1_51224_52454_-	cd00397, DNA_BRE_C, DNA breaking-rejoining enzymes, C-terminal catalytic domain	NA|285aa|down_9|NZ_CP041744.1_52742_53597_-	smart00702, P4Hc, Prolyl 4-hydroxylase alpha subunit homologues
GCF_007556815.1_ASM755681v1	NZ_CP041745	Paraburkholderia megapolitana strain LMG 23650 chromosome 2, complete sequence	1	3983347-3983438	1	CRISPRCasFinder	no		cas3,csa3,WYL,DinG,DEDDh	Orphan	TTTCTTCGATCCGGCCAGCGGGCAA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,RT,WYL,csa3,PD-DExK,DinG,DEDDh	NA,NA|85aa|down_9|NZ_CP041745.1_3993478_3993733_-	NA|209aa|up_9|NZ_CP041745.1_3970848_3971475_+	cd07756, CYTH-like_Pase_CHAD, Uncharacterized subgroup of the CYTH-like superfamily having an associated CHAD domain	NA|273aa|up_8|NZ_CP041745.1_3971537_3972356_+	PRK05254, PRK05254, uracil-DNA glycosylase; Provisional	NA|200aa|up_7|NZ_CP041745.1_3972535_3973135_-	PRK00170, PRK00170, azoreductase; Reviewed	NA|597aa|up_6|NZ_CP041745.1_3973373_3975164_-	COG3975, COG3975, Predicted protease with the C-terminal PDZ domain [General function prediction only]	NA|242aa|up_5|NZ_CP041745.1_3975322_3976048_-	cd03020, DsbA_DsbC_DsbG, DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold	NA|391aa|up_4|NZ_CP041745.1_3976201_3977374_-	PRK07608, PRK07608, UbiH/UbiF family hydroxylase	NA|365aa|up_3|NZ_CP041745.1_3977672_3978767_+	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|442aa|up_2|NZ_CP041745.1_3979042_3980368_+	PRK10974, PRK10974, sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA|295aa|up_1|NZ_CP041745.1_3980482_3981367_+	PRK10561, PRK10561, sn-glycerol-3-phosphate ABC transporter permease UgpA	NA|282aa|up_0|NZ_CP041745.1_3981363_3982209_+	PRK10973, PRK10973, sn-glycerol-3-phosphate ABC transporter permease UgpE	NA|555aa|down_0|NZ_CP041745.1_3983646_3985311_+	PRK11819, PRK11819, putative ABC transporter ATP-binding protein; Reviewed	NA|379aa|down_1|NZ_CP041745.1_3985467_3986604_+	pfam05359, DUF748, Domain of Unknown Function (DUF748)	NA|176aa|down_2|NZ_CP041745.1_3986727_3987255_+	cd20302, cupin_DAD, 2,4'-Dihydroxyacetophenone dioxygenase (DAD), cupin domain	NA|434aa|down_3|NZ_CP041745.1_3987322_3988624_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|243aa|down_4|NZ_CP041745.1_3988666_3989395_+	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|271aa|down_5|NZ_CP041745.1_3989432_3990245_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|208aa|down_6|NZ_CP041745.1_3990410_3991034_-	cd02603, HAD_sEH-N_like, N-terminal lipase phosphatase domain of human soluble epoxide hydrolase, Escherichia coli YihX/HAD4 alpha-D-glucose 1-phosphate phosphatase, and related domains, may be inactive	NA|184aa|down_7|NZ_CP041745.1_3991030_3991582_-	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases	NA|605aa|down_8|NZ_CP041745.1_3991644_3993459_-	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|85aa|down_9|NZ_CP041745.1_3993478_3993733_-	NA
