assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_007290395.1_ASM729039v1	NZ_CP041656	Bradyrhizobium sp. 58S1 chromosome, complete genome	1	1089427-1089533	1	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3	Orphan	CACCTCTCCCGCAAGCGGGAGAGG	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3	NA|87aa|up_6|NZ_CP041656.1_1079963_1080224_-,NA|114aa|down_2|NZ_CP041656.1_1091783_1092125_+,NA|114aa|down_3|NZ_CP041656.1_1092308_1092650_+	NA|118aa|up_9|NZ_CP041656.1_1076864_1077218_-	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|155aa|up_8|NZ_CP041656.1_1078077_1078542_-	PRK05978, PRK05978, hypothetical protein; Provisional	NA|457aa|up_7|NZ_CP041656.1_1078591_1079962_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|87aa|up_6|NZ_CP041656.1_1079963_1080224_-	NA	NA|251aa|up_5|NZ_CP041656.1_1080449_1081202_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|135aa|up_4|NZ_CP041656.1_1081277_1081682_-	pfam02635, DrsE, DsrE/DsrF-like family	NA|446aa|up_3|NZ_CP041656.1_1082652_1083990_-	pfam04932, Wzy_C, O-Antigen ligase	NA|468aa|up_2|NZ_CP041656.1_1084061_1085465_-	cd13141, MATE_like_13, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins	NA|600aa|up_1|NZ_CP041656.1_1085519_1087319_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|528aa|up_0|NZ_CP041656.1_1087805_1089389_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|440aa|down_0|NZ_CP041656.1_1089579_1090899_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|212aa|down_1|NZ_CP041656.1_1091094_1091730_+	pfam14246, TetR_C_7, AefR-like transcriptional repressor, C-terminal region	NA|114aa|down_2|NZ_CP041656.1_1091783_1092125_+	NA	NA|114aa|down_3|NZ_CP041656.1_1092308_1092650_+	NA	NA|243aa|down_4|NZ_CP041656.1_1092763_1093492_-	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]	NA|452aa|down_5|NZ_CP041656.1_1093564_1094920_-	PRK08186, PRK08186, allophanate hydrolase; Provisional	NA|337aa|down_6|NZ_CP041656.1_1094981_1095992_-	cd13560, PBP2_taurine, Taurine-binding periplasmic protein; the type 2 periplasmic binding protein fold	NA|280aa|down_7|NZ_CP041656.1_1096014_1096854_-	PRK10160, PRK10160, taurine ABC transporter permease TauC	NA|433aa|down_8|NZ_CP041656.1_1096850_1098149_-	COG0624, ArgE, Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]	NA|196aa|down_9|NZ_CP041656.1_1098380_1098968_-	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]
GCF_007290395.1_ASM729039v1	NZ_CP041656	Bradyrhizobium sp. 58S1 chromosome, complete genome	2	2231204-2231301	2	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3	Orphan	AGCGGCGGGCTCGGTGATCTCCT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3	NA|343aa|up_3|NZ_CP041656.1_2227576_2228605_-,NA|207aa|up_2|NZ_CP041656.1_2228814_2229435_+,NA|72aa|up_1|NZ_CP041656.1_2229551_2229767_-,NA	NA|202aa|up_9|NZ_CP041656.1_2221708_2222314_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|380aa|up_8|NZ_CP041656.1_2222321_2223461_-	PRK09237, PRK09237, amidohydrolase/deacetylase family metallohydrolase	NA|319aa|up_7|NZ_CP041656.1_2223871_2224828_-	cd13578, PBP2_Bug27, Aromatic solutes transporter of Bug (Bordetella uptake gene) protein family;  contains the type 2 periplasmic binding fold	NA|124aa|up_6|NZ_CP041656.1_2224887_2225259_-	cd02238, cupin_KdgF, pectin degradation protein KdgF and related proteins, cupin domain	NA|213aa|up_5|NZ_CP041656.1_2225287_2225926_-	PRK06201, PRK06201, hypothetical protein; Validated	NA|506aa|up_4|NZ_CP041656.1_2225953_2227471_-	cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins	NA|343aa|up_3|NZ_CP041656.1_2227576_2228605_-	NA	NA|207aa|up_2|NZ_CP041656.1_2228814_2229435_+	NA	NA|72aa|up_1|NZ_CP041656.1_2229551_2229767_-	NA	NA|336aa|up_0|NZ_CP041656.1_2229785_2230793_-	PRK08229, PRK08229, 2-dehydropantoate 2-reductase; Provisional	NA|91aa|down_0|NZ_CP041656.1_2231595_2231868_+	COG2261, COG2261, Predicted membrane protein [Function unknown]	NA|262aa|down_1|NZ_CP041656.1_2232016_2232802_-	cd05233, SDR_c, classical (c) SDRs	NA|355aa|down_2|NZ_CP041656.1_2233049_2234114_+	cd00567, ACAD, Acyl-CoA dehydrogenase	NA|387aa|down_3|NZ_CP041656.1_2234132_2235293_+	cd01152, ACAD_fadE6_17_26, Putative acyl-CoA dehydrogenases similar to fadE6, fadE17, and fadE26	NA|271aa|down_4|NZ_CP041656.1_2235334_2236147_+	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|251aa|down_5|NZ_CP041656.1_2236235_2236988_-	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	NA|263aa|down_6|NZ_CP041656.1_2236990_2237779_-	PRK06688, PRK06688, enoyl-CoA hydratase; Provisional	NA|402aa|down_7|NZ_CP041656.1_2237952_2239158_-	cd06327, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins (substrate binding proteins or SBPs)	NA|284aa|down_8|NZ_CP041656.1_2239401_2240253_+	smart00318, SNc, Staphylococcal nuclease homologues	NA|497aa|down_9|NZ_CP041656.1_2240286_2241777_+	COG4784, COG4784, Putative Zn-dependent protease [General function prediction only]
GCF_007290395.1_ASM729039v1	NZ_CP041656	Bradyrhizobium sp. 58S1 chromosome, complete genome	3	3505997-3506073	3	CRISPRCasFinder	no		csa3,WYL,DEDDh,cas3	Orphan	TGCCGCGGCGGATGGCGCGGGTG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,cas3	NA,NA|197aa|down_9|NZ_CP041656.1_3525689_3526280_+	NA|710aa|up_9|NZ_CP041656.1_3496027_3498157_+	pfam13779, DUF4175, Domain of unknown function (DUF4175)	NA|299aa|up_8|NZ_CP041656.1_3498160_3499057_+	pfam13779, DUF4175, Domain of unknown function (DUF4175)	NA|125aa|up_7|NZ_CP041656.1_3499201_3499576_-	pfam00072, Response_reg, Response regulator receiver domain	NA|293aa|up_6|NZ_CP041656.1_3499626_3500505_-	TIGR02098, Uncharacterized_protein_MJ0042, MJ0042 family finger-like domain	NA|220aa|up_5|NZ_CP041656.1_3500686_3501346_+	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|323aa|up_4|NZ_CP041656.1_3501338_3502307_+	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|235aa|up_3|NZ_CP041656.1_3502379_3503084_+	cd06259, YdcF-like, YdcF-like	NA|258aa|up_2|NZ_CP041656.1_3503119_3503893_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|204aa|up_1|NZ_CP041656.1_3503889_3504501_-	COG3703, ChaC, Uncharacterized protein involved in cation transport [Inorganic ion transport and metabolism]	NA|395aa|up_0|NZ_CP041656.1_3504611_3505796_+	pfam09898, DUF2125, Uncharacterized protein conserved in bacteria (DUF2125)	NA|366aa|down_0|NZ_CP041656.1_3506857_3507955_-	PRK02731, PRK02731, histidinol-phosphate aminotransferase; Validated	NA|283aa|down_1|NZ_CP041656.1_3507989_3508838_-	PRK06034, PRK06034, hypothetical protein; Provisional	NA|401aa|down_2|NZ_CP041656.1_3509221_3510424_+	PRK00175, metX, homoserine O-acetyltransferase; Provisional	NA|221aa|down_3|NZ_CP041656.1_3510426_3511089_+	pfam07021, MetW, Methionine biosynthesis protein MetW	NA|288aa|down_4|NZ_CP041656.1_3511177_3512041_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|262aa|down_5|NZ_CP041656.1_3512258_3513044_+	TIGR02594, hypothetical_protein, TIGR02594 family protein	NA|263aa|down_6|NZ_CP041656.1_3513187_3513976_-	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only]	NA|880aa|down_7|NZ_CP041656.1_3514218_3516858_+	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|693aa|down_8|NZ_CP041656.1_3516947_3519026_-	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|197aa|down_9|NZ_CP041656.1_3525689_3526280_+	NA
