assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006965465.1_ASM696546v1	NZ_CP041359	Escherichia coli strain U1 chromosome, complete genome	1	141838-142415	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	Type I-E	CGGTTTATCCCCGCTGACGCGGGGAACAC,CGGTTTATCCCCGCTGACGCGGGGAACAC,CGGTTTATCCCCGCTGNCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,9	9	TypeI-E	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	NA,NA	NA|254aa|up_9|NZ_CP041359.1_133650_134412_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP041359.1_134392_135442_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP041359.1_135438_135918_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP041359.1_135917_136628_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP041359.1_136646_136958_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP041359.1_137151_137475_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP041359.1_137524_138130_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP041359.1_138129_139557_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP041359.1_139558_140467_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP041359.1_140718_141756_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP041359.1_142511_142805_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP041359.1_142801_143725_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP041359.1_143721_144372_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP041359.1_144353_145100_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP041359.1_145110_146166_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP041359.1_146180_146717_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP041359.1_146713_148276_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP041359.1_148373_151073_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP041359.1_151267_151420_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP041359.1_151684_152419_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_006965465.1_ASM696546v1	NZ_CP041359	Escherichia coli strain U1 chromosome, complete genome	2	169553-170435	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	14,14,13	14	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	NA,NA	NA|87aa|up_9|NZ_CP041359.1_158024_158285_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_8|NZ_CP041359.1_158301_158877_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|450aa|up_7|NZ_CP041359.1_159011_160360_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|287aa|up_6|NZ_CP041359.1_160459_161320_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP041359.1_161316_162096_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP041359.1_162073_163411_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP041359.1_163504_164959_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP041359.1_165028_165814_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP041359.1_166132_167410_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP041359.1_167436_168915_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP041359.1_170773_171445_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|291aa|down_1|NZ_CP041359.1_171738_172611_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_2|NZ_CP041359.1_172670_173969_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_CP041359.1_174056_175694_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_CP041359.1_175921_176713_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_CP041359.1_176784_177120_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_CP041359.1_177119_177368_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_CP041359.1_177445_179680_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_CP041359.1_179727_181029_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_CP041359.1_181085_183842_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
GCF_006965465.1_ASM696546v1	NZ_CP041359	Escherichia coli strain U1 chromosome, complete genome	3	3078472-3078613	3	CRISPRCasFinder	no		csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	Orphan	GCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAGAAATGCAG	47	0	0	NA	NA	NA	1	1	Orphan	csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,PD-DExK,RT,WYL,DEDDh,c2c9_V-U4,DinG,cas14j	NA|36aa|up_4|NZ_CP041359.1_3074694_3074802_-,NA|64aa|down_4|NZ_CP041359.1_3085035_3085227_-	NA|354aa|up_9|NZ_CP041359.1_3067935_3068997_-	pfam00419, Fimbrial, Fimbrial protein	NA|244aa|up_8|NZ_CP041359.1_3068993_3069725_-	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion]	NA|817aa|up_7|NZ_CP041359.1_3069739_3072190_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|189aa|up_6|NZ_CP041359.1_3072249_3072816_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|428aa|up_5|NZ_CP041359.1_3073205_3074489_-	PRK05614, gltA, citrate synthase	NA|36aa|up_4|NZ_CP041359.1_3074694_3074802_-	NA	NA|130aa|up_3|NZ_CP041359.1_3075197_3075587_+	PRK09487, sdhC, succinate dehydrogenase cytochrome b556 subunit	NA|116aa|up_2|NZ_CP041359.1_3075580_3075928_+	PRK09488, sdhD, succinate dehydrogenase membrane anchor subunit	NA|589aa|up_1|NZ_CP041359.1_3075927_3077694_+	PRK08958, sdhA, succinate dehydrogenase flavoprotein subunit; Reviewed	NA|239aa|up_0|NZ_CP041359.1_3077709_3078426_+	PRK05950, sdhB, succinate dehydrogenase iron-sulfur subunit; Reviewed	NA|934aa|down_0|NZ_CP041359.1_3078775_3081577_+	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed	NA|406aa|down_1|NZ_CP041359.1_3081591_3082809_+	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA|389aa|down_2|NZ_CP041359.1_3082902_3084069_+	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta	NA|290aa|down_3|NZ_CP041359.1_3084068_3084938_+	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated	NA|64aa|down_4|NZ_CP041359.1_3085035_3085227_-	NA	NA|49aa|down_5|NZ_CP041359.1_3085186_3085333_+	COG2986, HutH, Histidine ammonia-lyase [Amino acid transport and metabolism]	NA|302aa|down_6|NZ_CP041359.1_3085603_3086509_+	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|201aa|down_7|NZ_CP041359.1_3086542_3087145_-	PRK05986, PRK05986, cob(I)yrinic acid a,c-diamide adenosyltransferase	NA|551aa|down_8|NZ_CP041359.1_3087154_3088807_-	PRK15392, PRK15392, class I fumarate hydratase	NA|427aa|down_9|NZ_CP041359.1_3088914_3090195_-	COG1301, GltP, Na+/H+-dicarboxylate symporters [Energy production and conversion]
