assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006874665.1_ASM687466v1	NZ_CP030089	Lactobacillus reuteri strain YSJL-12 chromosome, complete genome	1	627985-628325	1,1	CRISPRCasFinder,PILER-CR	no		csa3,cas3,cas14j,RT,DinG,DEDDh	Orphan	AATTTAAATAATTGGGATACACATAATGT,AAACAGTAAATTTAAATAATTGGGACACACATAATGTCACTAATATGGAAGAAATGTTT	29,59	0	0	NA	NA	NA:NA	4,2	4	Orphan	csa3,cas3,cas14j,RT,DinG,DEDDh	NA,NA|229aa|down_2|NZ_CP030089.1_632208_632895_+,NA|62aa|down_6|NZ_CP030089.1_636969_637155_+	NA|290aa|up_9|NZ_CP030089.1_608657_609527_+	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|194aa|up_8|NZ_CP030089.1_609540_610122_+	pfam00908, dTDP_sugar_isom, dTDP-4-dehydrorhamnose 3,5-epimerase	NA|347aa|up_7|NZ_CP030089.1_610133_611174_+	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|280aa|up_6|NZ_CP030089.1_611320_612160_+	pfam04321, RmlD_sub_bind, RmlD substrate binding domain	NA|874aa|up_5|NZ_CP030089.1_612231_614853_+	cd06583, PGRP, Peptidoglycan recognition proteins (PGRPs) are pattern recognition receptors that bind, and in certain cases, hydrolyze peptidoglycans (PGNs) of bacterial cell walls	NA|373aa|up_4|NZ_CP030089.1_614924_616043_+	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|490aa|up_3|NZ_CP030089.1_616085_617555_-	PRK09379, PRK09379, LytR family transcriptional regulator	NA|526aa|up_2|NZ_CP030089.1_617741_619319_+	PRK00741, prfC, peptide chain release factor 3; Provisional	NA|371aa|up_1|NZ_CP030089.1_619329_620442_+	cd08983, GH43_Bt3655-like, Glycosyl hydrolase family 43 protein such as Bacteroides thetaiotaomicron VPI-5482 arabinofuranosidase Bt3655	NA|906aa|up_0|NZ_CP030089.1_624088_626806_+	TIGR03715, cell_surface_protein_precursor, KxYKxGKxW signal peptide	NA|128aa|down_0|NZ_CP030089.1_630981_631365_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|289aa|down_1|NZ_CP030089.1_631342_632209_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|229aa|down_2|NZ_CP030089.1_632208_632895_+	NA	NA|242aa|down_3|NZ_CP030089.1_632953_633679_-	pfam06458, MucBP, MucBP domain	NA|203aa|down_4|NZ_CP030089.1_633828_634437_+	COG4684, COG4684, Predicted membrane protein [Function unknown]	NA|735aa|down_5|NZ_CP030089.1_634488_636693_-	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]	NA|62aa|down_6|NZ_CP030089.1_636969_637155_+	NA	NA|89aa|down_7|NZ_CP030089.1_637276_637543_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|577aa|down_8|NZ_CP030089.1_637542_639273_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|406aa|down_9|NZ_CP030089.1_639506_640724_+	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins
GCF_006874665.1_ASM687466v1	NZ_CP030089	Lactobacillus reuteri strain YSJL-12 chromosome, complete genome	2	1853673-1854079	2	CRISPRCasFinder	no		csa3,cas3,cas14j,RT,DinG,DEDDh	Orphan	GATGGGTTAGTAGGTGTTGTAGG	23	0	0	NA	NA	NA	7	7	Orphan	csa3,cas3,cas14j,RT,DinG,DEDDh	NA,NA|63aa|down_1|NZ_CP030089.1_1855800_1855989_-,NA|323aa|down_3|NZ_CP030089.1_1861860_1862829_-,NA|230aa|down_4|NZ_CP030089.1_1862821_1863511_-,NA|176aa|down_5|NZ_CP030089.1_1863494_1864022_-	NA|277aa|up_9|NZ_CP030089.1_1835005_1835836_-	TIGR03729, acc_ester, putative phosphoesterase	NA|500aa|up_8|NZ_CP030089.1_1835895_1837395_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|239aa|up_7|NZ_CP030089.1_1837607_1838324_-	pfam12182, DUF3642, Bacterial lipoprotein	NA|113aa|up_6|NZ_CP030089.1_1839988_1840327_-	PTZ00450, PTZ00450, macrophage migration inhibitory factor-like protein; Provisional	NA|123aa|up_5|NZ_CP030089.1_1840430_1840799_+	COG1733, COG1733, Predicted transcriptional regulators [Transcription]	NA|167aa|up_4|NZ_CP030089.1_1841086_1841587_-	cd03014, PRX_Atyp2cys, Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx)	NA|394aa|up_3|NZ_CP030089.1_1841997_1843179_+	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|459aa|up_2|NZ_CP030089.1_1843265_1844642_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|471aa|up_1|NZ_CP030089.1_1850703_1852116_+	pfam05935, Arylsulfotrans, Arylsulfotransferase (ASST)	NA|323aa|up_0|NZ_CP030089.1_1852153_1853122_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|47aa|down_0|NZ_CP030089.1_1855670_1855811_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|63aa|down_1|NZ_CP030089.1_1855800_1855989_-	NA	NA|320aa|down_2|NZ_CP030089.1_1860619_1861579_-	smart01038, Bgal_small_N, Beta galactosidase small chain	NA|323aa|down_3|NZ_CP030089.1_1861860_1862829_-	NA	NA|230aa|down_4|NZ_CP030089.1_1862821_1863511_-	NA	NA|176aa|down_5|NZ_CP030089.1_1863494_1864022_-	NA	NA|509aa|down_6|NZ_CP030089.1_1864852_1866379_-	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|334aa|down_7|NZ_CP030089.1_1866399_1867401_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|307aa|down_8|NZ_CP030089.1_1867508_1868429_-	PRK00114, hslO, Hsp33 family molecular chaperone HslO	NA|703aa|down_9|NZ_CP030089.1_1868519_1870628_-	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH
