The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP023655	Pediococcus pentosaceus strain JQI-7 chromosome, complete genome	1732880	479386	487004	1732880		Bacillus_phage(33.33%)	8	NA	NA
WP_141822485.1|479386_480502_+	peptide chain release factor 2	NA	B5LLF2	Mycobacterium_phage	47.1	1.9e-05
WP_002834460.1|480513_481218_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.3	6.9e-38
WP_060743354.1|481189_482575_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	33.8	2.2e-27
WP_060743355.1|482736_483618_+	phosphate ABC transporter substrate-binding protein PstS family protein	NA	H6WG65	Cyanophage	25.5	2.7e-07
WP_060743356.1|483617_484526_+	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_002834456.1|484526_485414_+	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_060743357.1|485431_486232_+	phosphate ABC transporter ATP-binding protein	NA	Q6GZ03	Mycoplasma_phage	42.0	3.4e-09
WP_023440049.1|486245_487004_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.5	1.7e-18
>prophage 2
NZ_CP023655	Pediococcus pentosaceus strain JQI-7 chromosome, complete genome	1732880	769733	861627	1732880	tail,head,integrase,holin,terminase,tRNA,transposase,plate,protease,portal	Lactobacillus_phage(37.21%)	108	779167:779183	784317:784333
WP_011673299.1|769733_770471_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_002833579.1|770613_770973_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_002833580.1|771393_771717_-	heavy metal-binding domain-containing protein	NA	M4STD1	Rhodobacter_phage	34.6	3.5e-05
WP_011673301.1|771757_772090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011673302.1|772503_772953_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_138428713.1|772966_773926_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_002833584.1|773964_774204_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_060743708.1|774221_775151_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_011673305.1|775155_775884_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	41.6	8.5e-07
WP_060743707.1|775902_777129_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_060743756.1|777134_777572_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA	NA
WP_011673308.1|777571_777985_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
WP_029257879.1|778002_779370_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
779167:779183	attL	AAAATAATTGTTAAAAT	NA	NA	NA	NA
WP_002833591.1|779359_780190_+	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_002833592.1|780203_780971_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060743755.1|780987_781746_+	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
WP_141822563.1|781884_783057_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1X9I5C3	Streptococcus_phage	29.9	1.6e-39
WP_029257881.1|783153_783456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141822565.1|783544_784615_-	DUF4236 domain-containing protein	NA	A0A2K9V2W7	Faecalibacterium_phage	53.5	1.3e-08
784317:784333	attR	AAAATAATTGTTAAAAT	NA	NA	NA	NA
WP_141822567.1|784726_785164_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069825264.1|785219_785618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_069825578.1|785621_785972_-	helix-turn-helix transcriptional regulator	NA	A8ATX5	Listeria_phage	50.6	2.5e-12
WP_141822569.1|786390_786633_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822922.1|786712_787165_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_141822571.1|787165_787441_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822573.1|787674_787956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822575.1|787948_788800_+	hypothetical protein	NA	D7RWF9	Brochothrix_phage	53.3	2.5e-66
WP_141822577.1|788759_789587_+	hypothetical protein	NA	A0A0P0IZH9	Lactobacillus_phage	42.7	1.2e-60
WP_141822579.1|789596_790427_+	helix-turn-helix domain-containing protein	NA	U5U793	Lactobacillus_phage	37.5	6.2e-38
WP_141822581.1|790429_791131_+	hypothetical protein	NA	E9LUU3	Lactobacillus_phage	63.5	5.0e-81
WP_141822583.1|791099_791360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822585.1|791379_791862_+	single-stranded DNA-binding protein	NA	A0A191KBY9	Streptococcus_virus	73.6	5.5e-39
WP_141822587.1|791686_792190_+	DeoR family transcriptional regulator	NA	NA	NA	NA	NA
WP_141822589.1|792355_792715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822591.1|792720_793107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069825280.1|793185_793611_+	hypothetical protein	NA	B8R690	Lactobacillus_phage	31.0	8.7e-12
WP_141822593.1|793958_794483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822595.1|794720_794918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822597.1|794980_795796_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822599.1|795865_796471_+|terminase	terminase small subunit	terminase	H9A0M8	Staphylococcus_phage	43.3	5.6e-12
WP_141822601.1|796454_797726_+|terminase	PBSX family phage terminase large subunit	terminase	Q6SE84	Lactobacillus_prophage	67.2	6.1e-170
WP_141822603.1|797733_799131_+|portal	phage portal protein	portal	A0A0P0IJV3	Lactobacillus_phage	60.8	5.2e-154
WP_141822605.1|799114_800077_+|head	phage head morphogenesis protein	head	A0A0P0ID43	Lactobacillus_phage	47.6	4.0e-73
WP_141822607.1|800079_800478_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822609.1|800958_801594_+	DUF4355 domain-containing protein	NA	NA	NA	NA	NA
WP_011673260.1|801608_802523_+	hypothetical protein	NA	Q5YA70	Bacillus_phage	62.2	4.8e-100
WP_141822611.1|802540_802807_+	hypothetical protein	NA	G8FUY7	Pediococcus_virus	55.1	1.5e-09
WP_141822613.1|802818_803190_+|head,tail	phage head-tail connector protein	head,tail	A0A0P0IV23	Lactobacillus_phage	53.6	2.4e-26
WP_141822615.1|803194_803497_+	hypothetical protein	NA	A0A0N7IR97	Lactobacillus_phage	45.5	4.9e-17
WP_141822617.1|803489_803861_+	hypothetical protein	NA	A0A0P0I3G7	Lactobacillus_phage	37.8	2.9e-11
WP_141822619.1|803861_804269_+	hypothetical protein	NA	A0A0A1EN91	Lactobacillus_phage	35.7	7.8e-18
WP_141822621.1|804286_804883_+|tail	phage major tail protein, TP901-1 family	tail	A0A0A1ELH3	Lactobacillus_phage	54.0	5.1e-50
WP_141822623.1|804960_805239_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822625.1|805318_805657_+	hypothetical protein	NA	A0A097BY80	Leuconostoc_phage	56.6	7.6e-27
WP_141822627.1|805704_806091_+	hypothetical protein	NA	A0A1B0Y2Q4	Lactobacillus_phage	52.1	2.9e-22
WP_141822629.1|806083_809434_+|tail	phage tail tape measure protein	tail	A0A097BYC3	Leuconostoc_phage	57.8	1.3e-123
WP_141822631.1|809433_810198_+|tail	phage tail protein	tail	Q6SEC3	Lactobacillus_prophage	46.4	7.9e-56
WP_141822633.1|810197_813182_+	peptidoglycan DD-metalloendopeptidase family protein	NA	Q6SEC2	Lactobacillus_prophage	36.4	3.2e-145
WP_141822635.1|813165_813612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822637.1|813615_815472_+|plate	BppU family phage baseplate upper protein	plate	O03968	Lactobacillus_phage	40.7	7.9e-118
WP_141822639.1|815480_816233_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822641.1|816232_816583_+	DUF2977 domain-containing protein	NA	NA	NA	NA	NA
WP_141822643.1|816582_816714_+	XkdX family protein	NA	NA	NA	NA	NA
WP_141822924.1|816763_817048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141822645.1|817047_817287_+|holin	holin	holin	NA	NA	NA	NA
WP_141822647.1|817270_818392_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0P0I386	Lactobacillus_phage	50.9	9.1e-93
WP_128886915.1|819579_820956_+	amino acid permease	NA	NA	NA	NA	NA
WP_128886914.1|821115_822282_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
WP_060743702.1|822321_822921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002833597.1|822999_823629_-	transcriptional repressor LexA	NA	A0A1B2APZ1	Phage_Wrath	45.1	1.2e-12
WP_002833598.1|823762_824011_+	DUF896 domain-containing protein	NA	NA	NA	NA	NA
WP_002833599.1|824081_824303_+	YneF family protein	NA	NA	NA	NA	NA
WP_029257926.1|824314_824959_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_002833602.1|825033_825789_+|tRNA	tRNA1(Val) (adenine(37)-N6)-methyltransferase	tRNA	NA	NA	NA	NA
WP_002833603.1|825769_826057_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_060743700.1|826177_827173_+	D-2-hydroxyacid dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	32.9	6.7e-47
WP_002833605.1|827324_828107_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_060743699.1|828222_829101_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_002833607.1|829254_829980_+	UMP kinase	NA	NA	NA	NA	NA
WP_060743698.1|829979_830540_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_011673316.1|830797_831547_+	isoprenyl transferase	NA	R9W0U9	Flavobacterium_phage	41.3	3.0e-23
WP_041527001.1|831557_832343_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_060743697.1|832366_833629_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_060743696.1|833656_835372_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	23.6	2.2e-05
WP_141822649.1|835465_839779_+	PolC-type DNA polymerase III	NA	A0A0K2SUJ2	Clostridium_phage	35.1	1.8e-19
WP_002833614.1|839898_840375_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_002833615.1|840388_841477_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_011673321.1|841498_841792_+	YlxR family protein	NA	NA	NA	NA	NA
WP_060744010.1|841792_842095_+	50S ribosomal protein L7	NA	NA	NA	NA	NA
WP_060744011.1|842107_844864_+	translation initiation factor IF-2	NA	A0A2H4UTS4	Bodo_saltans_virus	25.1	9.3e-22
WP_002833619.1|844880_845231_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_011673323.1|845369_846269_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_060744012.1|846272_847217_+	riboflavin biosynthesis protein RibF	NA	A0A1V0SD03	Indivirus	31.0	9.9e-08
WP_002833622.1|847324_848365_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_060744013.1|848354_848945_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_011673326.1|848970_850830_+	molecular chaperone DnaK	NA	A0A2P1EIW2	Megavirus	47.2	5.3e-138
WP_060744014.1|850926_852051_+	molecular chaperone DnaJ	NA	A0A0P0YNN4	Yellowstone_lake_phycodnavirus	33.2	1.3e-22
WP_002833626.1|852154_852382_-	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_141822651.1|852510_852981_-	tryptophan-rich sensory protein	NA	NA	NA	NA	NA
WP_141822653.1|853217_853700_+	QueT transporter family protein	NA	E7DN70	Pneumococcus_phage	35.0	4.9e-11
WP_060744015.1|853716_853938_+	DUF2829 domain-containing protein	NA	G3MBC9	Bacillus_virus	32.6	3.9e-08
WP_141822655.1|853938_854679_+	3-oxoacyl-ACP reductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	4.9e-18
WP_002833631.1|854802_855324_+	DUF4373 domain-containing protein	NA	A0A0P0HRQ2	Lactobacillus_phage	57.1	4.0e-43
WP_002833632.1|855515_855764_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_060744017.1|857097_858198_-	deoxyribonuclease	NA	NA	NA	NA	NA
WP_060744018.1|858300_858717_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141822657.1|859928_860588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141822659.1|860784_861627_-|transposase	IS3 family transposase	transposase	Q6J1X2	Lactobacillus_phage	99.6	4.6e-158
>prophage 3
NZ_CP023655	Pediococcus pentosaceus strain JQI-7 chromosome, complete genome	1732880	969030	978648	1732880	tRNA	Staphylococcus_phage(37.5%)	9	NA	NA
WP_060743609.1|969030_969876_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	34.4	2.3e-16
WP_023440467.1|970112_970850_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.4	1.3e-34
WP_060743608.1|970846_972298_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_029258026.1|972419_972905_-	dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	39.6	4.6e-25
WP_141822707.1|972933_973884_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	62.7	5.9e-117
WP_060743607.1|973896_975774_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	30.5	2.2e-51
WP_060743606.1|975776_976985_-|tRNA	CCA tRNA nucleotidyltransferase	tRNA	G3MAR3	Bacillus_virus	30.5	3.8e-36
WP_002833200.1|977238_978123_+	YitT family protein	NA	M1Q1P6	Streptococcus_phage	38.1	2.1e-52
WP_002833201.1|978177_978648_-	nucleoside deoxyribosyltransferase	NA	A0A1G5S9Z4	Enterococcus_phage	40.1	3.8e-16
>prophage 4
NZ_CP023655	Pediococcus pentosaceus strain JQI-7 chromosome, complete genome	1732880	1342645	1351209	1732880		Synechococcus_phage(33.33%)	9	NA	NA
WP_060743838.1|1342645_1343227_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.2	6.7e-23
WP_060743839.1|1343223_1344273_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D8KLC2	Synechococcus_phage	40.2	5.2e-58
WP_023440671.1|1344272_1345742_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.3	1.1e-56
WP_060743841.1|1345726_1347934_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	41.6	7.4e-147
WP_060743842.1|1347951_1348626_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_011673681.1|1348628_1348883_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_060743843.1|1348875_1349604_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SLB8	Cyanophage	43.0	3.6e-42
WP_060743844.1|1349603_1350743_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_011673684.1|1350726_1351209_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.9	2.6e-20
>prophage 5
NZ_CP023655	Pediococcus pentosaceus strain JQI-7 chromosome, complete genome	1732880	1360039	1368906	1732880		Streptococcus_phage(33.33%)	10	NA	NA
WP_060743848.1|1360039_1361056_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	30.8	4.3e-33
WP_002833272.1|1361055_1361391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002833271.1|1361406_1362036_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.7	2.0e-52
WP_002833270.1|1362200_1362800_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_002833269.1|1362826_1363141_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_060743849.1|1363156_1364902_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	48.4	2.8e-56
WP_060743850.1|1365113_1365599_-	nucleoside deaminase	NA	A0A2H4PQS8	Staphylococcus_phage	31.6	1.8e-05
WP_011673695.1|1365591_1366197_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011673696.1|1366408_1366639_+	glutaredoxin-like protein NrdH	NA	A0A0M7REK7	Lactobacillus_phage	48.1	8.0e-12
WP_011673697.1|1366740_1368906_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	59.9	3.9e-249
>prophage 6
NZ_CP023655	Pediococcus pentosaceus strain JQI-7 chromosome, complete genome	1732880	1592108	1600364	1732880		Bacillus_phage(33.33%)	9	NA	NA
WP_060743552.1|1592108_1593365_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	23.1	3.8e-07
WP_011673829.1|1593545_1594682_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	25.8	2.8e-25
WP_002834114.1|1594693_1595383_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	37.3	5.7e-37
WP_060743551.1|1595465_1595963_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A2P1EI66	Megavirus	38.1	1.3e-14
WP_011673831.1|1596093_1597236_-	guanosine monophosphate reductase	NA	A0A1V0SHK8	Klosneuvirus	34.0	2.4e-64
WP_023440817.1|1597257_1597962_-	DUF1129 domain-containing protein	NA	NA	NA	NA	NA
WP_060743550.1|1597990_1599097_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_002834122.1|1599313_1599499_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_023440818.1|1599512_1600364_-	ParB/RepB/Spo0J family partition protein	NA	S5VTK0	Leptospira_phage	34.9	2.1e-12
