assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006770405.1_ASM677040v1	NZ_CP021399	Bordetella hinzii strain TR-1212 chromosome, complete genome	1	2742845-2742946	1	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG	Orphan	CGCCGCCCGCGCCGCCGCCCGCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DEDDh,DinG	NA|109aa|up_0|NZ_CP021399.1_2735910_2736237_+,NA	NA|208aa|up_9|NZ_CP021399.1_2725074_2725698_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|410aa|up_8|NZ_CP021399.1_2725771_2727001_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|300aa|up_7|NZ_CP021399.1_2727026_2727926_-	cd01311, PDC_hydrolase, 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM)	NA|744aa|up_6|NZ_CP021399.1_2728050_2730282_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|341aa|up_5|NZ_CP021399.1_2730497_2731520_-	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|168aa|up_4|NZ_CP021399.1_2731516_2732020_-	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|462aa|up_3|NZ_CP021399.1_2732139_2733525_-	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|552aa|up_2|NZ_CP021399.1_2733524_2735180_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|184aa|up_1|NZ_CP021399.1_2735179_2735731_-	pfam12318, FAD-SLDH, Membrane bound FAD containing D-sorbitol dehydrogenase	NA|109aa|up_0|NZ_CP021399.1_2735910_2736237_+	NA	NA|200aa|down_0|NZ_CP021399.1_2743863_2744463_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|289aa|down_1|NZ_CP021399.1_2744582_2745449_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|230aa|down_2|NZ_CP021399.1_2745550_2746240_-	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|515aa|down_3|NZ_CP021399.1_2746510_2748055_+	cd08508, PBP2_NikA_DppA_OppA_like_1, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|306aa|down_4|NZ_CP021399.1_2748041_2748959_-	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold	NA|368aa|down_5|NZ_CP021399.1_2749050_2750154_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|99aa|down_6|NZ_CP021399.1_2750134_2750431_+	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|487aa|down_7|NZ_CP021399.1_2750427_2751888_+	TIGR01372, sarcosine_oxidase_alpha_subunit, sarcosine oxidase, alpha subunit family, heterotetrameric form	NA|375aa|down_8|NZ_CP021399.1_2751884_2753009_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|314aa|down_9|NZ_CP021399.1_2753005_2753947_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_006770405.1_ASM677040v1	NZ_CP021399	Bordetella hinzii strain TR-1212 chromosome, complete genome	2	2743025-2743165	2	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG	Orphan	CGCCGCCCGCGCCGCCGCCCGCG	23	1	1	2743048-2743063	NZ_CP021399.1_3723364-3723379	NA	2	2	Orphan	csa3,WYL,DEDDh,DinG	NA|109aa|up_0|NZ_CP021399.1_2735910_2736237_+,NA	NA|208aa|up_9|NZ_CP021399.1_2725074_2725698_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|410aa|up_8|NZ_CP021399.1_2725771_2727001_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|300aa|up_7|NZ_CP021399.1_2727026_2727926_-	cd01311, PDC_hydrolase, 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM)	NA|744aa|up_6|NZ_CP021399.1_2728050_2730282_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|341aa|up_5|NZ_CP021399.1_2730497_2731520_-	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|168aa|up_4|NZ_CP021399.1_2731516_2732020_-	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|462aa|up_3|NZ_CP021399.1_2732139_2733525_-	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|552aa|up_2|NZ_CP021399.1_2733524_2735180_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|184aa|up_1|NZ_CP021399.1_2735179_2735731_-	pfam12318, FAD-SLDH, Membrane bound FAD containing D-sorbitol dehydrogenase	NA|109aa|up_0|NZ_CP021399.1_2735910_2736237_+	NA	NA|200aa|down_0|NZ_CP021399.1_2743863_2744463_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|289aa|down_1|NZ_CP021399.1_2744582_2745449_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|230aa|down_2|NZ_CP021399.1_2745550_2746240_-	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|515aa|down_3|NZ_CP021399.1_2746510_2748055_+	cd08508, PBP2_NikA_DppA_OppA_like_1, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|306aa|down_4|NZ_CP021399.1_2748041_2748959_-	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold	NA|368aa|down_5|NZ_CP021399.1_2749050_2750154_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|99aa|down_6|NZ_CP021399.1_2750134_2750431_+	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|487aa|down_7|NZ_CP021399.1_2750427_2751888_+	TIGR01372, sarcosine_oxidase_alpha_subunit, sarcosine oxidase, alpha subunit family, heterotetrameric form	NA|375aa|down_8|NZ_CP021399.1_2751884_2753009_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|314aa|down_9|NZ_CP021399.1_2753005_2753947_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_006770405.1_ASM677040v1	NZ_CP021399	Bordetella hinzii strain TR-1212 chromosome, complete genome	3	2743250-2743479	3	CRISPRCasFinder	no		csa3,WYL,DEDDh,DinG	Orphan	CGCCGCCCGCGCCGCCGCCCGCG	23	0	0	NA	NA	NA	4	4	Orphan	csa3,WYL,DEDDh,DinG	NA|109aa|up_1|NZ_CP021399.1_2735910_2736237_+,NA	NA|410aa|up_9|NZ_CP021399.1_2725771_2727001_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|300aa|up_8|NZ_CP021399.1_2727026_2727926_-	cd01311, PDC_hydrolase, 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM)	NA|744aa|up_7|NZ_CP021399.1_2728050_2730282_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|341aa|up_6|NZ_CP021399.1_2730497_2731520_-	PRK09774, PRK09774, fec operon regulator FecR; Reviewed	NA|168aa|up_5|NZ_CP021399.1_2731516_2732020_-	PRK12528, PRK12528, RNA polymerase sigma factor; Provisional	NA|462aa|up_4|NZ_CP021399.1_2732139_2733525_-	TIGR00782, di-heme_cytochrome_cp, cytochrome c oxidase, cbb3-type, subunit III	NA|552aa|up_3|NZ_CP021399.1_2733524_2735180_-	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism]	NA|184aa|up_2|NZ_CP021399.1_2735179_2735731_-	pfam12318, FAD-SLDH, Membrane bound FAD containing D-sorbitol dehydrogenase	NA|109aa|up_1|NZ_CP021399.1_2735910_2736237_+	NA	NA|2322aa|up_0|NZ_CP021399.1_2736233_2743199_-	pfam03797, Autotransporter, Autotransporter beta-domain	NA|200aa|down_0|NZ_CP021399.1_2743863_2744463_+	COG3560, FMR2, Predicted oxidoreductase related to nitroreductase [General function prediction only]	NA|289aa|down_1|NZ_CP021399.1_2744582_2745449_-	PRK11752, PRK11752, putative S-transferase; Provisional	NA|230aa|down_2|NZ_CP021399.1_2745550_2746240_-	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|515aa|down_3|NZ_CP021399.1_2746510_2748055_+	cd08508, PBP2_NikA_DppA_OppA_like_1, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|306aa|down_4|NZ_CP021399.1_2748041_2748959_-	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold	NA|368aa|down_5|NZ_CP021399.1_2749050_2750154_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|99aa|down_6|NZ_CP021399.1_2750134_2750431_+	pfam13510, Fer2_4, 2Fe-2S iron-sulfur cluster binding domain	NA|487aa|down_7|NZ_CP021399.1_2750427_2751888_+	TIGR01372, sarcosine_oxidase_alpha_subunit, sarcosine oxidase, alpha subunit family, heterotetrameric form	NA|375aa|down_8|NZ_CP021399.1_2751884_2753009_+	COG0665, DadA, Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	NA|314aa|down_9|NZ_CP021399.1_2753005_2753947_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
