The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP019721	Staphylococcus epidermidis strain NBRC 100911	2422602	49525	81469	2422602	transposase	Staphylococcus_phage(55.56%)	32	NA	NA
WP_134943505.1|49525_50200_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.7	1.3e-126
WP_164071529.1|50227_50680_-	signal peptidase II	NA	NA	NA	NA	NA
WP_057504659.1|50839_51241_+	winged helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	45.6	1.9e-21
WP_057504658.1|51494_52262_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_002485759.1|52518_54927_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	64.9	8.1e-256
WP_142191172.1|54907_56602_-|transposase	IS1182-like element ISSep1 family transposase	transposase	A0ZS58	Staphylococcus_virus	77.6	1.5e-243
WP_049374229.1|57022_58444_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
WP_057504655.1|58671_59334_+	CadD family cadmium resistance transporter	NA	NA	NA	NA	NA
WP_001105987.1|59841_60516_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.6	6.8e-128
WP_000163428.1|60798_62145_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000425271.1|62444_62852_+	Hg(II)-responsive transcriptional regulator MerR	NA	NA	NA	NA	NA
WP_000746201.1|62868_63222_+	TlpA family protein disulfide reductase	NA	NA	NA	NA	NA
WP_000010351.1|63218_63899_+	cytochrome c biosynthesis protein	NA	NA	NA	NA	NA
WP_000968575.1|64033_64372_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057504652.1|64429_66073_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.4	1.7e-50
WP_000790334.1|66154_66805_+	organomercurial lyase MerB	NA	NA	NA	NA	NA
WP_000377077.1|66999_67515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001802813.1|67984_68266_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002409346.1|68331_69006_-|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	99.1	3.4e-127
WP_001053439.1|69205_69835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000931963.1|69849_70092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000832687.1|70490_71342_+|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	95.7	1.4e-69
WP_000036756.1|71441_72371_-	carbamate kinase	NA	NA	NA	NA	NA
WP_000793596.1|72390_73389_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000272781.1|73426_74116_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_000344142.1|74157_75579_-	arginine-ornithine antiporter	NA	NA	NA	NA	NA
WP_000249804.1|75664_76900_-	arginine deiminase	NA	NA	NA	NA	NA
WP_000711815.1|77168_77615_-	ArgR family transcriptional regulator	NA	NA	NA	NA	NA
WP_078147993.1|78557_78869_+	DUF3387 domain-containing protein	NA	NA	NA	NA	NA
WP_000475804.1|79139_79571_-	universal stress protein	NA	NA	NA	NA	NA
WP_000916431.1|80452_80779_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001106065.1|80794_81469_+|transposase	IS6 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	95.5	9.6e-122
>prophage 2
NZ_AP019721	Staphylococcus epidermidis strain NBRC 100911	2422602	1016727	1064953	2422602	transposase,tRNA,integrase	Staphylococcus_phage(81.82%)	39	1006857:1006873	1049628:1049644
1006857:1006873	attL	TAAAGCAACCCCTATAT	NA	NA	NA	NA
WP_002456422.1|1016727_1017222_-|integrase	site-specific integrase	integrase	B7T092	Staphylococcus_virus	76.1	3.8e-67
WP_002456423.1|1017380_1017593_+	hypothetical protein	NA	A0A2H4JCA1	uncultured_Caudovirales_phage	72.9	7.3e-20
WP_002456424.1|1017972_1018707_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049387519.1|1019233_1019521_-	hypothetical protein	NA	A0A2H4JGN1	uncultured_Caudovirales_phage	50.0	1.6e-17
WP_002456427.1|1019682_1020348_-	Ltp family lipoprotein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	41.8	7.0e-08
WP_002456429.1|1021598_1023023_+	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	63.9	6.6e-173
WP_001829851.1|1023012_1024014_+	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	50.2	6.9e-92
WP_002457867.1|1024010_1024259_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	83.1	6.5e-36
WP_002456430.1|1024329_1024797_+	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	57.4	5.5e-44
WP_002456431.1|1024783_1025569_+	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	71.3	2.0e-99
WP_002489635.1|1025799_1027392_-	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	83.4	2.1e-268
WP_001829830.1|1027761_1028961_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	85.4	4.1e-192
WP_002474706.1|1029063_1029972_+	hypothetical protein	NA	A0A2H4PQQ8	Staphylococcus_phage	80.6	1.8e-102
WP_001829832.1|1030152_1030989_+	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	73.3	1.0e-120
WP_162154154.1|1031291_1031429_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	76.7	4.0e-11
WP_141651809.1|1031658_1032837_-|transposase	IS110 family transposase	transposase	A0A1X9I619	Streptococcus_phage	37.2	7.4e-61
WP_001830729.1|1033315_1033669_-	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	32.5	8.5e-05
WP_001830726.1|1033665_1034031_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	57.0	4.1e-34
WP_002446728.1|1034069_1034378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001830731.1|1034654_1035368_+	transaldolase	NA	M1PR54	Cyanophage	37.4	4.1e-22
WP_002485267.1|1035507_1035951_+	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	43.5	5.3e-20
WP_001830734.1|1035937_1036381_-	competence protein ComK	NA	NA	NA	NA	NA
WP_001830724.1|1036386_1036866_-	sigma-70 family RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	42.3	2.7e-25
WP_002456441.1|1037073_1037289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001830727.1|1037666_1038518_+	glucosaminidase domain-containing protein	NA	A0A1J0MFB0	Staphylococcus_phage	35.6	1.0e-32
WP_002484471.1|1038865_1040350_+	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	65.6	2.5e-13
WP_002495598.1|1040786_1041830_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	66.8	8.9e-135
WP_002467848.1|1041836_1042469_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	77.6	1.1e-87
WP_002456445.1|1042481_1043663_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	76.1	2.5e-178
WP_002456446.1|1043675_1044137_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	84.2	1.2e-59
WP_001832688.1|1044393_1045395_-	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	69.4	1.3e-130
WP_001830886.1|1045637_1046465_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001830809.1|1046954_1047356_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001830894.1|1047592_1048156_-	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	66.5	1.9e-67
WP_001830802.1|1048152_1049106_-	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	84.7	3.3e-67
WP_001830884.1|1049212_1050427_+	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	83.7	4.6e-183
1049628:1049644	attR	ATATAGGGGTTGCTTTA	NA	NA	NA	NA
WP_002493961.1|1050718_1053133_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	87.4	0.0e+00
WP_001830891.1|1053158_1053470_+	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	71.8	4.1e-35
WP_001832672.1|1053874_1064953_+	YSIRK signal domain/LPXTG anchor domain surface protein	NA	A0A2H4PQU6	Staphylococcus_phage	25.7	7.8e-27
>prophage 3
NZ_AP019721	Staphylococcus epidermidis strain NBRC 100911	2422602	1774006	1782476	2422602		Synechococcus_phage(33.33%)	9	NA	NA
WP_001831672.1|1774006_1774573_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.0	6.1e-29
WP_001831685.1|1774572_1775604_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.4	2.1e-64
WP_002485328.1|1775596_1777081_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.9	7.2e-45
WP_002467589.1|1777059_1779249_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.4	1.1e-139
WP_001831727.1|1779241_1779913_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_001831728.1|1779914_1780175_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001831723.1|1780174_1780879_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	H8ZMN3	Synechococcus_phage	42.5	1.6e-47
WP_002486052.1|1780879_1782007_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002486053.1|1781993_1782476_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.7	2.6e-20
>prophage 4
NZ_AP019721	Staphylococcus epidermidis strain NBRC 100911	2422602	2015855	2026289	2422602		uncultured_Caudovirales_phage(66.67%)	10	NA	NA
WP_001829596.1|2015855_2016635_-	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	33.6	5.1e-18
WP_002438903.1|2016631_2017591_-	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	100.0	4.1e-17
WP_001829651.1|2017574_2018549_-	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	99.4	1.0e-164
WP_002456931.1|2018564_2018828_-	hypothetical protein	NA	A0A2H4IYB4	uncultured_Caudovirales_phage	100.0	5.5e-17
WP_001829597.1|2018802_2019771_-	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	100.0	3.9e-185
WP_001829582.1|2019889_2021995_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	100.0	0.0e+00
WP_001829589.1|2021957_2022356_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	100.0	2.0e-71
WP_002468673.1|2023116_2023986_+	DMT family transporter	NA	NA	NA	NA	NA
WP_001832596.1|2023999_2024500_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	70.1	1.1e-50
WP_001832607.1|2024783_2026289_+	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	34.0	5.5e-61
>prophage 5
NZ_AP019721	Staphylococcus epidermidis strain NBRC 100911	2422602	2046152	2056687	2422602		Staphylococcus_phage(22.22%)	13	NA	NA
WP_001830323.1|2046152_2047304_-	anthranilate synthase component I family protein	NA	A0A0B5J984	Pandoravirus	39.6	7.5e-26
WP_001830349.1|2047293_2047881_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_057504650.1|2048177_2048849_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	55.2	1.2e-63
WP_001830341.1|2048853_2049273_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_001830330.1|2049273_2049987_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	44.8	1.6e-55
WP_001830331.1|2050088_2050688_+	hypothetical protein	NA	NA	NA	NA	NA
WP_162152262.1|2051055_2051193_+	hypothetical protein	NA	A0A146ICT8	Staphylococcus_phage	79.1	1.1e-11
WP_001830329.1|2051788_2052226_+	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_001830332.1|2052276_2052750_+	DoxX family protein	NA	NA	NA	NA	NA
WP_001830352.1|2052724_2053414_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.2	3.4e-34
WP_025987135.1|2053416_2054469_+	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	30.6	2.0e-17
WP_057504638.1|2054538_2055645_-	glycosyltransferase family 2 protein	NA	A8CG95	Salmonella_phage	42.9	9.1e-61
WP_054828590.1|2055847_2056687_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	43.0	1.2e-60
