The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	111060	125462	4980580	integrase,holin	Morganella_phage(37.5%)	19	108231:108246	125632:125647
108231:108246	attL	GTTGAATTTTGCTGAT	NA	NA	NA	NA
WP_010835592.1|111060_114030_-	hypothetical protein	NA	F1C5E9	Cronobacter_phage	35.4	3.9e-82
WP_001651021.1|114039_114360_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001651020.1|114359_114530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023223122.1|114701_115076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023223121.1|115175_115451_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
WP_001651019.1|115443_115932_-	ProQ/FinO family protein	NA	NA	NA	NA	NA
WP_001651017.1|116145_118908_-	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	57.2	1.6e-295
WP_001651016.1|118900_119248_-	hypothetical protein	NA	A0A1B5FPL8	Escherichia_phage	62.2	2.1e-32
WP_010835589.1|119257_119884_-	2-octaprenylphenol hydroxylase	NA	A0A286S1S7	Klebsiella_phage	39.0	1.4e-26
WP_001651014.1|119880_120102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142091757.1|120098_120362_-|holin	nicotinic acetylcholine receptor subunit beta	holin	NA	NA	NA	NA
WP_001651013.1|120358_121042_-	host cell division inhibitor Icd-like protein	NA	A0A0P0ZE80	Stx2-converting_phage	45.0	1.2e-07
WP_001651012.1|121038_121536_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001651011.1|121532_121712_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_001651010.1|121704_122514_-	antA/AntB antirepressor family protein	NA	A0A0R6PJV6	Moraxella_phage	55.2	4.3e-28
WP_001651009.1|122526_122958_-	hypothetical protein	NA	A0A1W6JPH9	Morganella_phage	50.3	1.3e-26
WP_001651008.1|122957_123161_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_001651007.1|123254_124106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001651006.1|124202_125462_-|integrase	site-specific integrase	integrase	A0A1W6JPG6	Morganella_phage	79.4	2.8e-199
125632:125647	attR	GTTGAATTTTGCTGAT	NA	NA	NA	NA
>prophage 2
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	1149219	1207699	4980580	transposase,integrase	Escherichia_phage(27.27%)	55	1179597:1179613	1213842:1213858
WP_001650427.1|1149219_1149801_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1B5FPC6	Escherichia_phage	55.8	1.5e-51
WP_079780845.1|1150286_1151135_-	DUF4942 domain-containing protein	NA	NA	NA	NA	NA
WP_020837108.1|1151210_1151405_-	DUF957 domain-containing protein	NA	NA	NA	NA	NA
WP_020837109.1|1151430_1151922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032181230.1|1151918_1152296_-	toxin CbtA	NA	NA	NA	NA	NA
WP_020837111.1|1152355_1153003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167692809.1|1152999_1153341_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
WP_000691981.1|1153397_1153619_-	DUF987 domain-containing protein	NA	NA	NA	NA	NA
WP_000437750.1|1153639_1154119_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_079780843.1|1154130_1154601_-	antirestriction protein	NA	A0A1S5R3R9	Pseudomonas_phage	35.8	4.8e-11
WP_001234406.1|1154868_1155687_-	DUF945 domain-containing protein	NA	A0A2C9CX26	Yersinia_phage	37.2	9.7e-44
WP_001114682.1|1155806_1156040_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
WP_020837115.1|1156116_1156569_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001104018.1|1156628_1157171_-	DUF4339 domain-containing protein	NA	NA	NA	NA	NA
WP_000734138.1|1157233_1157686_-	hypothetical protein	NA	J7KKK1	Erwinia_phage	50.8	1.0e-34
WP_001020418.1|1157682_1158135_-	hypothetical protein	NA	NA	NA	NA	NA
WP_040220404.1|1158170_1158806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079780841.1|1158802_1159516_-	sporulation transcriptional regulator SpoIIID	NA	NA	NA	NA	NA
WP_079780839.1|1159776_1160652_-	GTPase family protein	NA	NA	NA	NA	NA
WP_044067157.1|1160931_1161315_+|transposase	transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	37.7	5.4e-13
WP_032670757.1|1163109_1165872_+	class I SAM-dependent DNA methyltransferase	NA	Q6NE04	Leptospira_phage	32.1	4.8e-119
WP_032669192.1|1165886_1167932_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
WP_032669191.1|1167924_1169103_+	GIY-YIG nuclease family protein	NA	NA	NA	NA	NA
WP_142091765.1|1169384_1170401_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	99.1	4.9e-186
WP_024196074.1|1170399_1170729_+	acid-activated periplasmic chaperone HdeB	NA	NA	NA	NA	NA
WP_032669189.1|1170780_1171584_-	aquaporin	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	27.6	4.8e-11
WP_002917661.1|1171637_1173461_-	diol dehydratase reactivase subunit alpha	NA	NA	NA	NA	NA
WP_079780837.1|1173473_1173899_-	glycerol dehydratase small subunit DhaB3	NA	NA	NA	NA	NA
WP_002917672.1|1173901_1174486_-	propanediol/glycerol family dehydratase medium subunit	NA	NA	NA	NA	NA
WP_079780836.1|1174498_1176166_-	propanediol/glycerol family dehydratase large subunit	NA	NA	NA	NA	NA
WP_014599267.1|1176579_1177008_+	heme-binding protein	NA	NA	NA	NA	NA
WP_023336801.1|1177029_1178193_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_002917678.1|1178213_1178567_+	glycerol dehydratase reactivase beta/small subunit family protein	NA	NA	NA	NA	NA
WP_004210508.1|1178567_1179098_+	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_023336800.1|1179075_1181001_-	PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR	NA	NA	NA	NA	NA
1179597:1179613	attL	CCAGATCGACGGTGGTG	NA	NA	NA	NA
WP_042922263.1|1181102_1182200_-	glycerol dehydrogenase	NA	NA	NA	NA	NA
WP_097311115.1|1183123_1184243_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.8	1.7e-51
WP_054626250.1|1184347_1185043_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_007372182.1|1187096_1188194_-	glycerol dehydrogenase	NA	NA	NA	NA	NA
WP_054626249.1|1188750_1189821_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
WP_007372179.1|1189831_1190464_+	dihydroxyacetone kinase ADP-binding subunit DhaL	NA	NA	NA	NA	NA
WP_054626248.1|1190474_1191893_+	dihydroxyacetone kinase subunit DhaM	NA	NA	NA	NA	NA
WP_032669180.1|1191967_1193617_+	glycerone kinase	NA	NA	NA	NA	NA
WP_054626247.1|1193720_1194491_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_007372175.1|1194698_1194896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004574636.1|1195360_1196650_-|transposase	ISL3-like element ISPpu12 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	40.4	9.5e-86
WP_003821921.1|1196671_1197184_-	signal peptidase II	NA	NA	NA	NA	NA
WP_004364974.1|1197187_1198084_-	cation transporter	NA	NA	NA	NA	NA
WP_004364961.1|1198179_1198587_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
WP_054626246.1|1198916_1201490_+	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_000860996.1|1201580_1202207_-	inovirus Gp2 family protein	NA	NA	NA	NA	NA
WP_079780965.1|1202478_1203177_-	recombinase family protein	NA	NA	NA	NA	NA
WP_016246231.1|1204077_1204290_-	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
WP_016246229.1|1205633_1206395_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142091766.1|1206457_1207699_-|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	47.5	3.7e-103
1213842:1213858	attR	CCAGATCGACGGTGGTG	NA	NA	NA	NA
>prophage 3
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	1236104	1271433	4980580	tRNA,head,holin,terminase,tail,transposase,portal,integrase,plate,capsid	Cronobacter_phage(66.67%)	40	1244081:1244096	1274658:1274673
WP_023194791.1|1236104_1236872_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000065257.1|1236912_1237260_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_001030985.1|1237416_1238637_-	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_001212379.1|1238629_1239148_-	YfiR family protein	NA	NA	NA	NA	NA
WP_001168062.1|1239586_1240657_+	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	2.4e-90
WP_000225191.1|1240666_1241788_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_000210991.1|1241845_1242754_+	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000200077.1|1242714_1243875_-	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_010989056.1|1243974_1244022_-	hypothetical protein	NA	NA	NA	NA	NA
1244081:1244096	attL	AAAACGCGCCCGAAGG	NA	NA	NA	NA
WP_024132356.1|1244185_1245178_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A0F7LBR0	Escherichia_phage	58.2	1.4e-108
WP_000185337.1|1245244_1245550_-	helix-turn-helix transcriptional regulator	NA	A0A0M5M1I9	Salmonella_phage	47.5	1.6e-15
WP_000661531.1|1245647_1245986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000645096.1|1246011_1246344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000681787.1|1246353_1246923_+	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	46.3	2.6e-43
WP_000922120.1|1246925_1247144_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000994501.1|1247182_1249840_+	toprim domain-containing protein	NA	A0A077K8T2	Ralstonia_phage	47.5	1.2e-244
WP_001264830.1|1249867_1250137_-	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	78.4	5.1e-34
WP_000746494.1|1250190_1251210_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	68.5	1.3e-135
WP_000019445.1|1252965_1253946_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
WP_023375469.1|1254401_1255238_+|capsid	capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	52.3	3.6e-46
WP_001176503.1|1255272_1256301_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	71.6	3.7e-133
WP_001177276.1|1256312_1257011_+|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	52.6	3.6e-63
WP_000491223.1|1257109_1257562_+|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	64.7	1.2e-48
WP_000080871.1|1257558_1258041_+|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	48.7	2.3e-37
WP_000606933.1|1258037_1258742_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	59.5	4.0e-70
WP_000220184.1|1258738_1259866_+	DUF2586 family protein	NA	F1BUL5	Cronobacter_phage	82.9	8.1e-174
WP_000166745.1|1259862_1260318_+	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	71.5	1.7e-58
WP_001154426.1|1260330_1260627_+|holin	phage holin family protein	holin	C7BGD7	Burkholderia_phage	48.2	2.4e-16
WP_000175558.1|1260623_1260965_+	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	91.1	2.2e-50
WP_000376378.1|1260964_1261297_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	70.0	4.4e-35
WP_000411500.1|1261443_1261701_+	hypothetical protein	NA	A5X9I7	Aeromonas_virus	61.0	2.3e-20
WP_000811100.1|1261888_1263856_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	70.7	1.9e-271
WP_001002797.1|1263852_1264182_+	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	72.4	3.8e-39
WP_000136922.1|1264178_1265363_+|plate	baseplate J/gp47 family protein	plate	F1BUK6	Cronobacter_phage	78.1	2.0e-178
WP_142091767.1|1265355_1265943_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	81.5	2.1e-88
WP_000084303.1|1265952_1267965_+|tail	phage tail protein	tail	F1BUK3	Cronobacter_phage	81.2	2.1e-148
WP_057515117.1|1267967_1268498_+|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	31.8	1.3e-12
WP_000267954.1|1268487_1269213_+	hypothetical protein	NA	F1BUK1	Cronobacter_phage	56.4	3.8e-68
WP_000200791.1|1269184_1269730_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	71.4	3.5e-58
WP_000977529.1|1269729_1271433_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	81.3	1.7e-223
1274658:1274673	attR	AAAACGCGCCCGAAGG	NA	NA	NA	NA
>prophage 4
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	1524909	1576208	4980580	holin,terminase,tail,integrase,capsid	Salmonella_phage(57.35%)	81	1523928:1523942	1575117:1575131
1523928:1523942	attL	TGGTGTCCCCTGCAG	NA	NA	NA	NA
WP_023205219.1|1524909_1525983_-	DNA cytosine methyltransferase	NA	Q858D4	Salmonella_phage	68.2	5.4e-143
WP_000200029.1|1525982_1526204_-	TraR/DksA family transcriptional regulator	NA	A0A0N7C211	Escherichia_phage	54.3	1.6e-14
WP_142091770.1|1526488_1527055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142091771.1|1527051_1527276_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142091772.1|1527275_1527941_-	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	89.9	4.0e-112
WP_006809793.1|1527937_1528090_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	44.2	1.3e-05
WP_142091773.1|1528086_1528515_-	regulator	NA	M9NYX4	Enterobacteria_phage	91.5	1.0e-68
WP_142091774.1|1528511_1529135_-	YqaJ viral recombinase family protein	NA	S0A2A9	Cellulophaga_phage	49.0	2.1e-46
WP_161503855.1|1529131_1529440_-	hypothetical protein	NA	A0A0F7L7F5	uncultured_marine_virus	33.3	2.9e-09
WP_142091775.1|1529876_1530161_-	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	93.6	1.5e-47
WP_006809788.1|1530232_1530442_-	cell division protein FtsZ	NA	M9NZE2	Enterobacteria_phage	95.7	6.7e-34
WP_023294196.1|1530438_1530597_-	hypothetical protein	NA	G8C7T3	Escherichia_phage	96.2	5.8e-22
WP_142091776.1|1530598_1530808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_045325422.1|1530954_1531404_-	hypothetical protein	NA	G8C7T5	Escherichia_phage	98.7	2.0e-75
WP_047746403.1|1531682_1531865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154400857.1|1531865_1532030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023313997.1|1532454_1532652_+	hypothetical protein	NA	G8C7T7	Escherichia_phage	93.8	9.2e-25
WP_026080590.1|1532807_1533584_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_017383046.1|1533571_1534114_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142091777.1|1534209_1534869_-	helix-turn-helix domain-containing protein	NA	K7P8B2	Enterobacteria_phage	61.5	3.2e-69
WP_142091778.1|1534976_1535195_+	helix-turn-helix transcriptional regulator	NA	I6S1U2	Salmonella_phage	48.5	6.8e-13
WP_023306037.1|1535282_1535567_+	hypothetical protein	NA	Q5G8T2	Enterobacteria_phage	57.4	5.2e-21
WP_172605413.1|1535605_1535752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142091779.1|1535744_1536830_+	replication protein	NA	E5AGE9	Erwinia_phage	53.3	1.6e-86
WP_142091780.1|1536826_1538200_+	replicative DNA helicase	NA	E5AGF0	Erwinia_phage	62.4	8.4e-165
WP_048206832.1|1538204_1538504_+	hypothetical protein	NA	M1FPD5	Enterobacteria_phage	51.6	2.8e-17
WP_172605414.1|1538500_1538920_+	hypothetical protein	NA	K7P799	Enterobacteria_phage	53.8	2.6e-32
WP_142091782.1|1538916_1539312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142091783.1|1539315_1539909_+	DUF551 domain-containing protein	NA	G8C7V0	Escherichia_phage	53.1	2.8e-32
WP_125387033.1|1539905_1540148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_142091784.1|1540396_1540852_+	recombination protein NinB	NA	I6PD71	Cronobacter_phage	65.6	1.3e-58
WP_047731075.1|1540851_1541022_+	NinE family protein	NA	K7P7K0	Enterobacteria_phage	90.6	2.9e-19
WP_032648651.1|1541014_1541305_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	90.6	1.8e-45
WP_023296424.1|1541301_1541664_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	83.2	4.3e-52
WP_142091786.1|1541773_1542271_+	antiterminator	NA	G8C7V7	Escherichia_phage	97.6	7.6e-92
WP_001514183.1|1542684_1543086_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001514184.1|1543082_1543358_+|holin	phage holin family protein	holin	S4TNV9	Salmonella_phage	41.0	5.8e-09
WP_088567027.1|1543361_1543802_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	71.8	2.0e-51
WP_142091787.1|1543798_1544185_+	DUF2570 domain-containing protein	NA	A0A192Y6H8	Salmonella_phage	39.5	3.2e-13
WP_142091788.1|1544500_1544998_+	KilA-N domain-containing protein	NA	A0A220NRM9	Escherichia_phage	93.9	2.1e-89
WP_001283924.1|1544994_1545252_+	hypothetical protein	NA	A0A1V0E5Q1	Salmonella_phage	100.0	3.8e-39
WP_142091789.1|1545646_1546066_+|terminase	terminase small subunit	terminase	A0A1V0E5Q4	Salmonella_phage	94.2	6.2e-63
WP_059509579.1|1546062_1547310_+|terminase	terminase	terminase	I6RSK1	Salmonella_phage	98.6	3.5e-218
WP_142091790.1|1547324_1548677_+	DUF1073 domain-containing protein	NA	H6WRT0	Salmonella_phage	88.0	1.9e-230
WP_020838512.1|1548630_1549590_+|capsid	minor capsid protein	capsid	H6WRT1	Salmonella_phage	99.7	4.6e-178
WP_142091791.1|1549605_1550871_+	hypothetical protein	NA	H6WRT2	Salmonella_phage	94.8	4.6e-226
WP_142091792.1|1550883_1551345_+	hypothetical protein	NA	G0ZND8	Cronobacter_phage	80.4	2.2e-61
WP_022651010.1|1551357_1552455_+	hypothetical protein	NA	G0ZND9	Cronobacter_phage	84.4	8.7e-181
WP_020838516.1|1552465_1552750_+	hypothetical protein	NA	A0A1V0E5P8	Salmonella_phage	75.3	1.7e-32
WP_023230831.1|1552811_1553018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_052934749.1|1553020_1553422_+	hypothetical protein	NA	I6S619	Salmonella_phage	75.2	3.0e-54
WP_142091793.1|1553421_1553601_+	DUF551 domain-containing protein	NA	Q5G8X7	Enterobacteria_phage	88.1	2.9e-25
WP_020838522.1|1553593_1553956_+	hypothetical protein	NA	A0A1V0E5P3	Salmonella_phage	92.5	2.4e-63
WP_020838523.1|1553963_1554401_+	hypothetical protein	NA	H6WRT9	Salmonella_phage	99.3	1.0e-76
WP_001650226.1|1554397_1554784_+	hypothetical protein	NA	I6R9A6	Salmonella_phage	100.0	2.0e-68
WP_020838525.1|1554799_1555345_+	HNH endonuclease	NA	A0A2H4FNF1	Salmonella_phage	46.3	3.6e-34
WP_001650225.1|1555349_1556090_+	immunoglobulin domain-containing protein	NA	H6WRU1	Salmonella_phage	96.3	9.8e-128
WP_023205069.1|1556134_1556788_+	hypothetical protein	NA	H6WRU2	Salmonella_phage	99.5	1.3e-120
WP_000065269.1|1557009_1557738_+	KilA-N domain-containing protein	NA	H6WRU3	Salmonella_phage	100.0	3.1e-142
WP_000360561.1|1557759_1558128_-	hypothetical protein	NA	H6WRU4	Salmonella_phage	65.0	9.4e-39
WP_000033147.1|1558347_1558725_-	Arc family DNA-binding protein	NA	I6RSL2	Salmonella_phage	99.2	1.3e-64
WP_070812951.1|1558840_1559011_+	Arc family DNA-binding protein	NA	I6R9A8	Salmonella_phage	98.2	1.6e-22
WP_070812950.1|1559003_1559978_+	phage antirepressor Ant	NA	I6S627	Salmonella_phage	96.9	1.3e-183
WP_058116493.1|1560110_1560485_+	hypothetical protein	NA	A0A1V0E5N7	Salmonella_phage	98.4	1.6e-65
WP_024132274.1|1560558_1560855_+	hypothetical protein	NA	A0A1V0E5P0	Salmonella_phage	100.0	8.6e-43
WP_000758150.1|1560937_1561291_+	hypothetical protein	NA	A0A1V0E5P9	Salmonella_phage	99.1	9.3e-60
WP_023135292.1|1561392_1561779_+	hypothetical protein	NA	I6R0Q4	Salmonella_phage	99.2	2.7e-68
WP_142091794.1|1561818_1565046_+	tape measure protein	NA	Q5G8W8	Enterobacteria_phage	40.6	5.1e-120
WP_001747800.1|1565067_1565283_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001747799.1|1565338_1565686_+|tail	phage tail protein	tail	H6WRV8	Salmonella_phage	97.4	5.7e-62
WP_016062819.1|1565696_1565903_+	hypothetical protein	NA	H6WRV9	Salmonella_phage	100.0	5.3e-31
WP_001650217.1|1565871_1566087_-	hypothetical protein	NA	H6WRW0	Salmonella_phage	100.0	2.1e-30
WP_006754904.1|1566252_1566957_+|tail	phage minor tail protein L	tail	H6WRW1	Salmonella_phage	100.0	8.4e-137
WP_142091795.1|1566956_1567676_+	C40 family peptidase	NA	Q5G8W2	Enterobacteria_phage	92.5	9.5e-136
WP_142091796.1|1567618_1568146_+|tail	tail assembly protein	tail	H6WRW3	Salmonella_phage	82.2	1.9e-64
WP_023253411.1|1568155_1571326_+	host specificity protein J	NA	A0A1V0E5M1	Salmonella_phage	96.5	0.0e+00
WP_001113925.1|1571334_1572294_+	hypothetical protein	NA	H6WRW5	Salmonella_phage	100.0	9.6e-184
WP_023205075.1|1572304_1573435_+|tail	tail fiber domain-containing protein	tail	S4TSP4	Salmonella_phage	99.7	1.1e-202
WP_000973018.1|1573641_1573755_-	DinI-like family protein	NA	S4TND2	Salmonella_phage	83.8	2.1e-10
WP_000958645.1|1573782_1574952_-|integrase	tyrosine-type recombinase/integrase	integrase	C6ZR22	Salmonella_phage	90.0	2.3e-211
WP_001590337.1|1575266_1576208_-	formate/nitrite transporter family protein	NA	E7DYY8	Enterobacteria_phage	87.8	4.1e-147
1575117:1575131	attR	TGGTGTCCCCTGCAG	NA	NA	NA	NA
>prophage 5
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	1818404	1827575	4980580	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000569166.1|1818404_1819352_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
WP_001650057.1|1819335_1820067_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_001261696.1|1820047_1820155_-	protein YohO	NA	NA	NA	NA	NA
WP_001240418.1|1820214_1820946_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_000272850.1|1821168_1822854_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
WP_000598637.1|1822850_1823570_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000950413.1|1823616_1824084_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_134928651.1|1824140_1824671_-	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000703137.1|1824842_1825301_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
WP_001834389.1|1825541_1827575_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 6
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	1907589	1913886	4980580		Enterobacteria_phage(50.0%)	6	NA	NA
WP_023205661.1|1907589_1908993_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
WP_000981469.1|1909170_1910064_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_023205660.1|1910440_1911526_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	3.6e-102
WP_001023659.1|1911525_1912425_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
WP_001612007.1|1912472_1913351_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	3.9e-107
WP_001649977.1|1913355_1913886_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	55.9	6.9e-51
>prophage 7
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	2116528	2164041	4980580	tRNA,head,holin,protease,terminase,tail,transposase,portal,integrase,plate,capsid	Salmonella_phage(59.62%)	61	2117897:2117911	2140152:2140166
WP_000004540.1|2116528_2117635_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000476070.1|2117688_2118150_-	NUDIX hydrolase	NA	NA	NA	NA	NA
2117897:2117911	attL	GCGAATAAAAAGCGC	NA	NA	NA	NA
WP_023138632.1|2118161_2118491_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_001249412.1|2118487_2119153_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_023195415.1|2119324_2120575_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	6.7e-20
WP_000741325.1|2120688_2121831_-|integrase	phage integrase Arm DNA-binding domain-containing protein	integrase	O21929	Phage_21	80.3	8.2e-174
WP_000089141.1|2121820_2122057_-	excisionase	NA	NA	NA	NA	NA
WP_000008351.1|2122199_2122739_-	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
WP_142091798.1|2122875_2123703_-	DUF2303 family protein	NA	Q8HAA2	Salmonella_phage	98.5	4.1e-151
WP_000997190.1|2123760_2124132_-	hypothetical protein	NA	Q8HAA1	Salmonella_phage	100.0	1.1e-63
WP_001020636.1|2124944_2125640_-	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	100.0	3.2e-128
WP_001191666.1|2125737_2125962_+	helix-turn-helix transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
WP_000509731.1|2125990_2126545_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
WP_058115948.1|2126541_2127684_+	Rha family phage regulatory protein	NA	A0A1C9IHV9	Salmonella_phage	87.9	1.5e-183
WP_000620702.1|2127680_2127905_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
WP_000104924.1|2127901_2128861_+	helix-turn-helix domain-containing protein	NA	U5P0A0	Shigella_phage	80.9	1.6e-117
WP_058115947.1|2128862_2129345_+	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	97.5	8.7e-85
WP_023210475.1|2129344_2129998_+	phage N-6-adenine-methyltransferase	NA	A5LH72	Enterobacteria_phage	88.9	3.2e-114
WP_000779150.1|2129994_2130384_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A1C9IIA0	Salmonella_phage	86.0	2.4e-61
WP_134928671.1|2130400_2131261_+	KilA-N domain-containing protein	NA	A0A192Y6F8	Salmonella_phage	99.0	3.5e-161
WP_135608835.1|2131268_2132258_+	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	98.5	1.3e-191
WP_023171057.1|2132288_2133119_+	antitermination protein	NA	A0A1B5FPA5	Escherichia_phage	43.3	5.0e-56
WP_000502119.1|2133370_2133829_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
WP_134928672.1|2133936_2134860_-	hypothetical protein	NA	A0A1B5FPA3	Escherichia_phage	56.4	2.1e-42
WP_023171055.1|2135010_2135397_+|holin	phage holin family protein	holin	A0A192Y8P2	Salmonella_phage	92.2	8.9e-56
WP_000250465.1|2135383_2135665_+|holin	phage holin family protein	holin	A0A0U2SHD1	Escherichia_phage	51.1	8.2e-19
WP_134928673.1|2135664_2136279_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	93.6	1.1e-108
WP_134928674.1|2136275_2136818_+	DUF2514 family protein	NA	NA	NA	NA	NA
WP_023136440.1|2136920_2137424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023137451.1|2137491_2137836_+	HNH endonuclease	NA	K7P7P6	Enterobacteria_phage	73.9	3.9e-47
WP_000919034.1|2137968_2138433_+|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	62.1	1.3e-48
WP_077945924.1|2138386_2140129_+|terminase	terminase large subunit	terminase	A0A0U2C138	Paracoccus_phage	44.5	9.1e-140
WP_000002706.1|2140128_2141433_+|portal	phage portal protein	portal	K7PJU5	Enterobacteria_phage	86.9	5.1e-220
2140152:2140166	attR	GCGAATAAAAAGCGC	NA	NA	NA	NA
WP_058115942.1|2141446_2142295_+|protease	Clp protease ClpP	protease	K7PH05	Enterobacteria_phage	88.6	9.8e-132
WP_058115941.1|2142304_2143522_+|capsid	phage major capsid protein	capsid	K7PM57	Enterobacteria_phage	89.4	3.2e-200
WP_000691032.1|2143565_2143808_+	hypothetical protein	NA	K7PHI6	Enterobacteria_phage	66.0	2.7e-10
WP_000886224.1|2143807_2144131_+|head,tail	phage gp6-like head-tail connector protein	head,tail	K7PKT4	Enterobacteria_phage	57.4	2.2e-31
WP_001255650.1|2144142_2144556_+|head	phage head closure protein	head	A0A192Y6C2	Salmonella_phage	74.8	3.5e-50
WP_058115939.1|2144527_2145040_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	86.5	1.8e-80
WP_058115938.1|2145036_2145582_+	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	83.6	8.9e-86
WP_000497755.1|2145603_2145768_+	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	96.3	8.4e-24
WP_001007994.1|2145757_2147254_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	Q8HAC5	Salmonella_phage	99.4	3.0e-277
WP_000515952.1|2147253_2147610_+|tail	phage tail tube protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
WP_000588852.1|2147606_2147933_+|tail	phage tail assembly protein	tail	Q8HAC3	Salmonella_phage	99.1	2.3e-52
WP_142091799.1|2148017_2149946_+|tail	phage tail tape measure protein	tail	Q8HAC2	Salmonella_phage	99.2	0.0e+00
WP_057517773.1|2149979_2151320_+	DNA circularization N-terminal domain-containing protein	NA	A0A192Y5U9	Salmonella_phage	99.1	1.4e-249
WP_057517772.1|2151316_2152375_+|plate	baseplate protein	plate	A0A192Y7L7	Salmonella_phage	99.1	7.3e-201
WP_001273647.1|2152374_2152908_+|plate	phage baseplate assembly protein	plate	Q8HAB9	Salmonella_phage	99.4	1.9e-96
WP_057517771.1|2152912_2153326_+	phage GP46 family protein	NA	A0A192Y6D0	Salmonella_phage	99.3	1.2e-74
WP_057517770.1|2153318_2154398_+|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	99.4	2.5e-204
WP_142091800.1|2154400_2154988_+	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	99.0	1.9e-113
WP_057517769.1|2154974_2156216_+	hypothetical protein	NA	Q8HAB4	Salmonella_phage	96.3	1.2e-53
WP_057515117.1|2156218_2156749_+|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	31.8	1.3e-12
WP_167692799.1|2156738_2156882_+	hypothetical protein	NA	NA	NA	NA	NA
WP_057515118.1|2156919_2158053_-	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	33.8	1.7e-38
WP_023171145.1|2158507_2158927_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	59.1	3.8e-36
WP_057517768.1|2158929_2160198_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	98.8	1.7e-244
WP_142091801.1|2160190_2160862_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.3	3.1e-80
WP_001521673.1|2161115_2161328_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.5e-20
WP_023205476.1|2161771_2162896_+	type III secretion system effector SopF	NA	NA	NA	NA	NA
WP_000019445.1|2163060_2164041_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 8
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	2978514	3020727	4980580	protease,terminase,tail,integrase,plate,lysis	Escherichia_phage(38.24%)	55	2984384:2984397	3022062:3022075
WP_001648837.1|2978514_2979195_+|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	71.0	3.4e-82
WP_024138909.1|2979862_2980054_-	DUF2767 family protein	NA	A0A0M4R5C3	Salmonella_phage	97.7	5.8e-16
WP_001530989.1|2980162_2980597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047587339.1|2980952_2981546_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	87.4	1.4e-92
WP_010835745.1|2981535_2982360_-	macro domain-containing protein	NA	A0A0M4QWS3	Salmonella_phage	94.9	9.8e-153
WP_010835744.1|2982356_2984066_-|tail	tail fiber protein	tail	A0A0U2SAV1	Escherichia_phage	65.6	7.6e-91
WP_000729406.1|2984062_2984689_-	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	71.6	3.3e-92
2984384:2984397	attL	ATAATTTCTCAGTT	NA	NA	NA	NA
WP_001643834.1|2984672_2985899_-|plate	baseplate J/gp47 family protein	plate	A0A0U2RJZ0	Escherichia_phage	63.9	3.7e-148
WP_001261467.1|2985895_2986228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000026342.1|2986224_2986941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010835743.1|2986937_2987981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000061271.1|2987980_2988256_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000011138.1|2988252_2988969_-	hypothetical protein	NA	A0A0U2JGI7	Escherichia_phage	36.5	1.3e-28
WP_060615704.1|2988968_2991023_-	hypothetical protein	NA	A0A2R3UAN6	Myoviridae_environmental_samples	35.8	1.3e-20
WP_023136430.1|2991146_2991734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001133547.1|2991733_2992171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010835740.1|2992174_2993569_-	hypothetical protein	NA	A0A0U2KD19	Escherichia_phage	37.0	1.2e-70
WP_010835739.1|2993574_2994513_-	hypothetical protein	NA	A0A0U2SH76	Escherichia_phage	39.5	1.9e-51
WP_031616384.1|2994496_2994907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001114360.1|2994924_2995350_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001643824.1|2995362_2995848_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001110972.1|2995912_2996944_-	DUF2184 domain-containing protein	NA	A0A0U2QQI2	Escherichia_phage	45.5	1.5e-73
WP_024142134.1|2996961_2997834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010835736.1|2997854_2999429_-	NUDIX hydrolase	NA	Q6UJ14	Burkholderia_virus	48.6	1.7e-20
WP_010835735.1|2999429_3000305_-	hypothetical protein	NA	A0A0U2I1R8	Escherichia_phage	45.8	1.2e-55
WP_058652144.1|3000276_3001707_-	DUF1073 domain-containing protein	NA	A0A0U2S5X9	Escherichia_phage	37.9	2.6e-92
WP_010835733.1|3001706_3002978_-	hypothetical protein	NA	A0A0U2JTW9	Escherichia_phage	38.3	5.1e-84
WP_010835732.1|3002967_3003939_-|terminase	terminase small subunit	terminase	I6NV32	Burkholderia_virus	33.2	2.0e-24
WP_024142133.1|3004034_3004250_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010835731.1|3004364_3004868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_088759388.1|3005196_3005640_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	78.7	4.7e-53
WP_020898616.1|3005660_3006149_-	lysozyme	NA	M9P0E5	Enterobacteria_phage	67.5	2.3e-56
WP_001526513.1|3006126_3006429_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_000658037.1|3006631_3006820_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000640103.1|3007212_3007791_-	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	52.0	2.4e-44
WP_000717784.1|3007787_3008081_-	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	65.3	2.1e-33
WP_001643788.1|3008077_3008674_-	DUF1367 family protein	NA	H9C173	Pectobacterium_phage	74.2	6.5e-82
WP_000474096.1|3008742_3008934_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001129735.1|3009117_3009456_-	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	86.6	3.7e-50
WP_010835728.1|3009622_3010225_-	restriction endonuclease subunit M	NA	A0A2R9YJG0	Escherichia_phage	87.8	7.8e-99
WP_000918618.1|3010217_3010466_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010835727.1|3010469_3011150_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010835726.1|3011187_3012576_-	helicase DnaB	NA	Q76H51	Enterobacteria_phage	47.3	2.3e-106
WP_010835725.1|3012572_3013553_-	helix-turn-helix domain-containing protein	NA	H9C164	Pectobacterium_phage	79.6	4.0e-44
WP_001195066.1|3013555_3013780_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	44.7	1.0e-08
WP_001643782.1|3013802_3014249_-	hypothetical protein	NA	H9C162	Pectobacterium_phage	50.4	5.5e-25
WP_023228218.1|3014313_3014517_-	helix-turn-helix domain-containing protein	NA	K7PHK4	Enterobacteria_phage	46.6	4.0e-07
WP_024142132.1|3014595_3014997_+	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	55.6	2.5e-37
WP_010835722.1|3015651_3015975_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023228220.1|3015982_3016228_+	hypothetical protein	NA	A0A1B1W282	Salmonella_phage	53.8	3.5e-13
WP_010835721.1|3016257_3018531_+	hypothetical protein	NA	H9C157	Pectobacterium_phage	35.3	1.1e-108
WP_010835720.1|3018527_3019082_+	siphovirus Gp157 family protein	NA	H9C156	Pectobacterium_phage	59.3	9.8e-48
WP_000916251.1|3019084_3019267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001643772.1|3019479_3019704_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
WP_010835719.1|3019704_3020727_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A192Y7M7	Salmonella_phage	53.5	9.2e-92
3022062:3022075	attR	AACTGAGAAATTAT	NA	NA	NA	NA
>prophage 9
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	3126023	3133337	4980580	integrase,protease	Ralstonia_phage(16.67%)	7	3120629:3120643	3132073:3132087
3120629:3120643	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
WP_001539594.1|3126023_3126401_+|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	41.0	1.2e-20
WP_001117984.1|3126562_3126760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000934064.1|3126973_3129250_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_000520789.1|3129280_3129601_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000447499.1|3129924_3130146_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000125894.1|3130275_3132222_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
3132073:3132087	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
WP_001201760.1|3132218_3133337_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
>prophage 10
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	3718384	3762064	4980580	head,holin,protease,terminase,tail,transposase,portal,integrase,capsid	Salmonella_phage(28.57%)	52	3729754:3729768	3760621:3760635
WP_000019445.1|3718384_3719365_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
WP_142091813.1|3719465_3720575_-|tail	tail fiber domain-containing protein	tail	S4TSP4	Salmonella_phage	99.2	4.5e-193
WP_001113925.1|3720585_3721545_-	hypothetical protein	NA	H6WRW5	Salmonella_phage	100.0	9.6e-184
WP_142091814.1|3721553_3724274_-	DUF1983 domain-containing protein	NA	S4TTF5	Salmonella_phage	99.9	0.0e+00
WP_000682267.1|3724273_3724672_-	hypothetical protein	NA	S4TR39	Salmonella_phage	100.0	8.8e-75
WP_000967282.1|3724678_3725263_-	hypothetical protein	NA	S4TND4	Salmonella_phage	100.0	1.5e-107
WP_000729325.1|3725262_3725856_-	hypothetical protein	NA	S4TSP7	Salmonella_phage	100.0	8.7e-111
WP_000064923.1|3726021_3726234_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000171561.1|3726272_3726584_-	hypothetical protein	NA	S4TNM6	Salmonella_phage	80.2	1.7e-36
WP_053533436.1|3726629_3729920_-|tail	phage tail tape measure protein	tail	K7PKG1	Enterobacteria_phage	66.5	0.0e+00
3729754:3729768	attL	TCCGCCAGTGCGCGC	NA	NA	NA	NA
WP_001805532.1|3729952_3730408_-	hypothetical protein	NA	A0A0S2SY43	Pseudomonas_phage	40.8	8.1e-08
WP_024134502.1|3730461_3730740_-	DUF4035 domain-containing protein	NA	S4TND7	Salmonella_phage	100.0	1.9e-44
WP_001129938.1|3730763_3731135_-|tail	phage tail protein	tail	S4TSQ0	Salmonella_phage	92.6	3.4e-60
WP_053521184.1|3731162_3731867_-	immunoglobulin domain-containing protein	NA	K7PHL2	Enterobacterial_phage	74.4	9.7e-93
WP_000133674.1|3731924_3732272_-	DUF3168 domain-containing protein	NA	S4TTG3	Salmonella_phage	77.0	3.1e-44
WP_000573486.1|3732268_3732718_-	HK97 gp10 family phage protein	NA	S4TR46	Salmonella_phage	95.3	2.1e-72
WP_020898872.1|3732714_3733053_-|head	phage head closure protein	head	A0A2H4JHK5	uncultured_Caudovirales_phage	70.5	6.6e-39
WP_001648719.1|3733062_3733389_-|head,tail	phage gp6-like head-tail connector protein	head,tail	K7PKT4	Enterobacteria_phage	85.2	5.2e-49
WP_020898873.1|3733388_3733649_-	hypothetical protein	NA	K7PHI6	Enterobacteria_phage	66.0	2.9e-10
WP_001648716.1|3733692_3734910_-|capsid	phage major capsid protein	capsid	K7PM57	Enterobacteria_phage	89.6	5.8e-202
WP_000039020.1|3734919_3735768_-|protease	Clp protease ClpP	protease	K7PH05	Enterobacteria_phage	87.9	1.7e-131
WP_000002707.1|3735781_3737086_-|portal	phage portal protein	portal	K7PJU5	Enterobacteria_phage	85.9	6.2e-218
WP_023194832.1|3737085_3738828_-|terminase	terminase large subunit	terminase	A0A0U2C138	Paracoccus_phage	45.2	9.7e-142
WP_000919036.1|3738781_3739246_-|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	62.7	7.4e-49
WP_023137451.1|3739378_3739723_-	HNH endonuclease	NA	K7P7P6	Enterobacteria_phage	73.9	3.9e-47
WP_000495546.1|3739790_3740168_-	hypothetical protein	NA	Q6UAR9	Klebsiella_phage	66.1	1.2e-41
WP_001050802.1|3740210_3740750_-	DUF2514 domain-containing protein	NA	A0A291LBG9	Klebsiella_phage	46.6	3.7e-07
WP_023137782.1|3740746_3741373_-	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	80.2	7.8e-94
WP_162264800.1|3741375_3741717_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	80.4	9.6e-46
WP_001244502.1|3742202_3742637_-	antitermination protein Q	NA	B6SD39	Bacteriophage	58.9	4.5e-40
WP_079780986.1|3742941_3745110_-	replication protein	NA	B6SCY1	Bacteriophage	72.4	1.6e-173
WP_000170999.1|3745113_3745326_-	helix-turn-helix transcriptional regulator	NA	A0A0R6PHL1	Moraxella_phage	42.9	6.0e-06
WP_079780985.1|3745446_3746070_+	helix-turn-helix domain-containing protein	NA	A0A1I9KG86	Aeromonas_phage	45.3	6.7e-37
WP_023135388.1|3746613_3747138_+	hypothetical protein	NA	C9EH97	Sodalis_phage	48.8	8.4e-41
WP_000051347.1|3747395_3748298_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079780983.1|3748300_3749602_+	DUF2800 domain-containing protein	NA	B6SCX9	Bacteriophage	56.3	1.0e-132
WP_079780981.1|3749616_3750165_+	DUF2815 family protein	NA	Q775A5	Bordetella_phage	65.4	7.1e-67
WP_134928716.1|3750205_3750730_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079780979.1|3750752_3752816_+	DNA polymerase	NA	Q775A3	Bordetella_phage	68.1	1.6e-276
WP_079780978.1|3752821_3753124_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079780976.1|3753120_3753324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015406092.1|3753334_3753556_+	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015406093.1|3753545_3753788_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079780975.1|3753771_3754041_+	VRR-NUC domain-containing protein	NA	B6SD64	Bacteriophage	65.9	3.9e-26
WP_079780974.1|3754043_3754757_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079780973.1|3754795_3756187_+	DEAD/DEAH box helicase	NA	Q3LZN8	Bacteriophage	73.0	1.0e-210
WP_024136027.1|3756195_3756372_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_001046411.1|3756378_3756846_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000772661.1|3756846_3758019_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	49.0	5.0e-110
WP_001647976.1|3758363_3759614_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.2	1.4e-97
WP_001285275.1|3759625_3760729_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.8	6.9e-61
3760621:3760635	attR	GCGCGCACTGGCGGA	NA	NA	NA	NA
WP_001043667.1|3761011_3762064_+	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	58.8	2.6e-113
>prophage 11
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	4232986	4287610	4980580	tRNA,transposase,integrase,tail	Salmonella_phage(22.22%)	44	4273478:4273493	4290558:4290573
WP_000749991.1|4232986_4233952_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	53.8	8.2e-66
WP_023203355.1|4234430_4235672_+	multidrug efflux MFS transporter MdtM	NA	NA	NA	NA	NA
WP_001033033.1|4235758_4237030_+	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_000233256.1|4237249_4238434_+	MFS transporter	NA	NA	NA	NA	NA
WP_000068750.1|4239304_4239976_+	YjiH family protein	NA	NA	NA	NA	NA
WP_000211979.1|4239972_4240434_+	membrane protein	NA	NA	NA	NA	NA
WP_001113051.1|4240446_4241619_+	beta-aspartyl-peptidase	NA	NA	NA	NA	NA
WP_000383509.1|4241737_4242646_+	hypochlorite stress DNA-binding transcriptional regulator HypT	NA	NA	NA	NA	NA
WP_000683243.1|4242651_4243386_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_000907671.1|4243624_4244155_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_001094611.1|4244871_4245885_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000841654.1|4245885_4246659_-	Uxu operon transcriptional regulator	NA	NA	NA	NA	NA
WP_017441742.1|4247008_4247683_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_023205818.1|4247679_4248141_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_001651410.1|4248345_4249257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001240360.1|4249532_4250528_-	membrane protein	NA	NA	NA	NA	NA
WP_001651409.1|4250783_4251389_-	DUF1062 domain-containing protein	NA	NA	NA	NA	NA
WP_001651407.1|4251875_4252133_+	YjhX family toxin	NA	NA	NA	NA	NA
WP_078055473.1|4252137_4253769_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000532939.1|4254328_4255045_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_023205817.1|4255623_4256631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205816.1|4257527_4259120_-	TnsA endonuclease N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_000422448.1|4260265_4260460_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023205815.1|4260769_4264069_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001651402.1|4264081_4270402_+	DEAD/DEAH box helicase	NA	A0A1B1IUF6	uncultured_Mediterranean_phage	22.1	1.8e-44
WP_023205813.1|4270901_4271918_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_001199743.1|4273090_4273399_-	CcdB family protein	NA	NA	NA	NA	NA
WP_000016244.1|4273401_4273641_-	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA	NA
4273478:4273493	attL	TTTTCTGCTTTCCAGC	NA	NA	NA	NA
WP_000254751.1|4273749_4273998_-	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_167877406.1|4275299_4277699_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	32.0	1.1e-98
WP_001747644.1|4277925_4278045_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_047670528.1|4278059_4278371_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	70.5	2.4e-27
WP_072031783.1|4278747_4279020_-	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	46.9	6.3e-08
WP_047670531.1|4279025_4279577_-	phage polarity suppression protein	NA	NA	NA	NA	NA
WP_047670534.1|4279573_4280317_-	Sid	NA	NA	NA	NA	NA
WP_142091823.1|4280716_4283389_-	DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	34.4	1.6e-58
WP_001075576.1|4283385_4283769_-	DUF5375 family protein	NA	NA	NA	NA	NA
WP_047670540.1|4283765_4284050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047670543.1|4284081_4284441_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001118612.1|4284433_4284610_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	55.6	4.2e-05
WP_000190567.1|4284797_4284983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000455466.1|4285079_4285310_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_047670546.1|4285678_4286317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047670547.1|4286347_4287610_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	35.4	8.2e-66
4290558:4290573	attR	GCTGGAAAGCAGAAAA	NA	NA	NA	NA
>prophage 12
NZ_AP019692	Salmonella enterica subsp. enterica serovar Senftenberg strain SL180013	4980580	4580560	4627644	4980580	tRNA,plate,tail	Burkholderia_phage(36.36%)	49	NA	NA
WP_001182229.1|4580560_4581559_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_001039337.1|4581646_4582957_-	conjugal transfer protein TraF	NA	NA	NA	NA	NA
WP_000416272.1|4583203_4583719_+	zinc uptake transcriptional repressor Zur	NA	NA	NA	NA	NA
WP_001030592.1|4583817_4584027_-	CsbD family protein	NA	NA	NA	NA	NA
WP_010989093.1|4584048_4584162_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001128113.1|4584158_4585484_-	MATE family efflux transporter DinF	NA	NA	NA	NA	NA
WP_000646079.1|4585662_4586271_-	repressor LexA	NA	Q9G0C2	Lactococcus_phage	38.0	1.0e-13
WP_000002902.1|4586379_4586748_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_000017360.1|4586918_4589339_+	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
WP_000455249.1|4589437_4590310_-	4-hydroxybenzoate octaprenyltransferase	NA	NA	NA	NA	NA
WP_000019219.1|4590323_4590821_-	chorismate lyase	NA	NA	NA	NA	NA
WP_000782497.1|4591001_4591919_-	maltose operon protein MalM	NA	NA	NA	NA	NA
WP_000973644.1|4592082_4593441_-	maltoporin	NA	NA	NA	NA	NA
WP_000179176.1|4593528_4594638_-	maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA	Q6GZ03	Mycoplasma_phage	47.2	6.2e-17
WP_001651229.1|4594999_4596190_+	maltose/maltodextrin ABC transporter substrate-binding protein MalE	NA	NA	NA	NA	NA
WP_023205186.1|4596321_4597866_+	maltose ABC transporter permease MalF	NA	NA	NA	NA	NA
WP_001252081.1|4597880_4598771_+	maltose ABC transporter permease MalG	NA	NA	NA	NA	NA
WP_000982752.1|4598936_4599347_-	phosphate-starvation-inducible protein PsiE	NA	NA	NA	NA	NA
WP_000750805.1|4599489_4601586_-	YjbH domain-containing protein	NA	NA	NA	NA	NA
WP_001651227.1|4601585_4602323_-	capsule biosynthesis GfcC family protein	NA	NA	NA	NA	NA
WP_023888164.1|4602319_4602988_-	YjbF family lipoprotein	NA	NA	NA	NA	NA
WP_001541297.1|4603021_4603264_-	outer membrane protein	NA	NA	NA	NA	NA
WP_000790027.1|4603708_4605358_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000136392.1|4605746_4607096_+	lysine-sensitive aspartokinase 3	NA	NA	NA	NA	NA
WP_001651225.1|4607223_4607571_-	hypothetical protein	NA	Q6QIE8	Burkholderia_phage	52.6	7.5e-22
WP_001226440.1|4608146_4608434_+	membrane protein	NA	Q6QIC8	Burkholderia_phage	48.1	5.1e-16
WP_001270435.1|4608436_4609042_+	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	2.5e-60
WP_000777266.1|4609054_4609369_+	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_000449438.1|4609527_4609983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000875314.1|4609979_4610177_+	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000729849.1|4610166_4611594_+|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.8e-194
WP_000907495.1|4611593_4612118_+|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_001003638.1|4612169_4612487_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_001651222.1|4612446_4612575_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_023205187.1|4612671_4615026_+|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.5	1.2e-65
WP_023205188.1|4615025_4615979_+|tail	phage tail protein	tail	A4JWL1	Burkholderia_virus	50.8	3.9e-36
WP_001269717.1|4615978_4616188_+|tail	tail protein X	tail	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000818149.1|4616175_4617219_+	phage late control D family protein	NA	A4JWL3	Burkholderia_virus	45.9	5.0e-77
WP_001651220.1|4617228_4617951_+|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_023205189.1|4618277_4618640_+	GtrA family protein	NA	I1TED9	Salmonella_phage	70.0	4.0e-42
WP_001651217.1|4618636_4619566_+	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	84.1	6.7e-150
WP_023205190.1|4619565_4621113_+	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	1.5e-48
WP_001093501.1|4621276_4621636_+	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_023205192.1|4621626_4622742_+|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	52.0	6.9e-101
WP_023205193.1|4622734_4623367_+|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	6.6e-24
WP_023205194.1|4623369_4625115_+|tail	tail fiber protein	tail	A0A0M3ULH6	Salmonella_phage	40.2	1.4e-52
WP_044133443.1|4625119_4625725_+	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_001651210.1|4625721_4626177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000587743.1|4626915_4627644_+	hypothetical protein	NA	A0A292GAQ8	Xanthomonas_phage	28.2	3.5e-13
