The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041159	Leisingera aquaemixtae strain R2C4 chromosome, complete genome	3820802	1569539	1605930	3820802	protease,tRNA,tail,capsid,head	Paracoccus_phage(27.27%)	35	NA	NA
WP_141890413.1|1569539_1570604_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_141890414.1|1570664_1574141_-	DUF3971 domain-containing protein	NA	NA	NA	NA	NA
WP_141890415.1|1574191_1574653_+	redoxin domain-containing protein	NA	NA	NA	NA	NA
WP_141890416.1|1574927_1575770_+	DUF455 family protein	NA	NA	NA	NA	NA
WP_141890417.1|1575859_1576396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_058287013.1|1576620_1577952_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A8ATH6	Listeria_phage	45.0	3.0e-18
WP_141890418.1|1577941_1578481_+	polymer-forming cytoskeletal protein	NA	NA	NA	NA	NA
WP_141890419.1|1578735_1580106_+	calcium-binding protein	NA	NA	NA	NA	NA
WP_141892075.1|1580159_1581122_-	DUF3179 domain-containing protein	NA	NA	NA	NA	NA
WP_058287016.1|1581275_1581824_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	60.6	2.3e-41
WP_058287017.1|1581816_1582323_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	55.0	2.1e-41
WP_141890420.1|1582463_1583654_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_141890421.1|1583721_1585356_-	DNA alkylation response protein	NA	NA	NA	NA	NA
WP_058287020.1|1585587_1585887_+	septum formation initiator precursor	NA	NA	NA	NA	NA
WP_141890422.1|1586241_1587255_+	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
WP_141890423.1|1587271_1588642_+	pyruvate dehydrogenase complex E1 component subunit beta	NA	NA	NA	NA	NA
WP_058287023.1|1588650_1588911_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141890424.1|1588912_1590235_+	pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase	NA	NA	NA	NA	NA
WP_141890425.1|1590634_1592110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141890426.1|1592394_1593459_-	pyridoxal-phosphate dependent enzyme	NA	A0A1X9I5F1	Streptococcus_phage	45.5	4.8e-67
WP_058287027.1|1593760_1594573_-	serine O-acetyltransferase	NA	NA	NA	NA	NA
WP_141890427.1|1594727_1595036_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141890428.1|1595032_1598947_-	host specificity protein	NA	A0A0B5A7K5	Paracoccus_phage	40.3	3.6e-237
WP_058287030.1|1598946_1599486_-	peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	39.7	8.4e-28
WP_141890429.1|1599482_1600370_-	DUF2163 domain-containing protein	NA	A0A0K0PVK1	Roseobacter_phage	38.7	4.9e-57
WP_141890430.1|1600366_1600999_-	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	52.4	1.6e-57
WP_141890431.1|1601016_1601676_-|tail	phage tail tape measure protein	tail	D6PFD6	uncultured_phage	33.0	5.1e-11
WP_141890432.1|1601668_1601884_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_141890433.1|1601880_1602201_-	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_141890434.1|1602204_1602618_-|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_141890435.1|1602664_1603072_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_141890436.1|1603068_1603401_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_141890437.1|1603397_1603997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141890438.1|1604179_1605361_-|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	38.5	3.4e-66
WP_141890439.1|1605357_1605930_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	50.9	1.9e-33
>prophage 2
NZ_CP041159	Leisingera aquaemixtae strain R2C4 chromosome, complete genome	3820802	3184786	3191701	3820802		Thermoanaerobacterium_phage(16.67%)	8	NA	NA
WP_058287535.1|3184786_3185353_+	helix-turn-helix transcriptional regulator	NA	I3VYZ1	Thermoanaerobacterium_phage	43.3	2.1e-05
WP_008554505.1|3185627_3185834_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	58.9	1.6e-11
WP_141891564.1|3185898_3186300_-	VOC family protein	NA	NA	NA	NA	NA
WP_141891565.1|3186463_3187651_+	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	29.6	4.4e-37
WP_141892123.1|3187665_3188694_+	L-threonine 3-dehydrogenase	NA	R9TPW0	Vibrio_phage	66.7	4.5e-14
WP_141891566.1|3188772_3189501_-	serine/threonine protein phosphatase	NA	A0A1V0EF12	Caulobacter_phage	38.6	6.2e-34
WP_141891567.1|3189655_3190054_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141891568.1|3190105_3191701_-	phosphoglycerate dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	38.3	1.2e-45
>prophage 1
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	0	4470	121606		Erysipelothrix_phage(100.0%)	4	NA	NA
WP_167510214.1|714_1545_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167510215.1|1541_2243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141889179.1|2654_3050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_167510221.1|3018_4470_-	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.9	3.4e-39
>prophage 2
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	9344	14158	121606		Streptococcus_phage(50.0%)	4	NA	NA
WP_141889189.1|9344_11531_+	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.4	6.3e-122
WP_141889190.1|11594_12104_+	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_141889191.1|12326_12782_-	DUF411 domain-containing protein	NA	NA	NA	NA	NA
WP_141889192.1|12784_14158_-	peptidoglycan DD-metalloendopeptidase family protein	NA	G9BW84	Planktothrix_phage	43.9	8.2e-19
>prophage 3
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	22053	25277	121606	transposase	Planktothrix_phage(50.0%)	3	NA	NA
WP_141889201.1|22053_22824_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.3	2.2e-21
WP_141889202.1|22823_23567_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
WP_141889203.1|24248_25277_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.8	1.8e-18
>prophage 4
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	41391	49872	121606	transposase	Stx2-converting_phage(40.0%)	8	NA	NA
WP_141889223.1|41391_43659_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.7	8.5e-130
WP_141889224.1|43696_44855_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	42.9	1.6e-47
WP_141889225.1|45450_45774_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_141889226.1|45965_46352_+	metallopeptidase family protein	NA	NA	NA	NA	NA
WP_141889227.1|46524_47208_+	UPF0149 family protein	NA	NA	NA	NA	NA
WP_167510219.1|47435_47837_+|transposase	transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	49.0	7.4e-05
WP_141889229.1|47833_48181_+	IS66 family insertion sequence element accessory protein TnpB	NA	A0A0P0ZDM8	Stx2-converting_phage	56.2	3.0e-26
WP_141889295.1|48243_49872_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	45.0	1.1e-99
>prophage 5
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	54095	54992	121606		Enterobacteria_phage(100.0%)	1	NA	NA
WP_141889231.1|54095_54992_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	49.4	7.4e-53
>prophage 6
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	58772	61949	121606		Rhizobium_phage(100.0%)	1	NA	NA
WP_141889237.1|58772_61949_-	hypothetical protein	NA	L7TKC0	Rhizobium_phage	47.4	4.6e-33
>prophage 7
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	79243	80269	121606		Rhodobacter_phage(100.0%)	1	NA	NA
WP_141889254.1|79243_80269_-	RepB family plasmid replication initiator protein	NA	A0A0K1Y6J9	Rhodobacter_phage	39.8	3.5e-67
>prophage 8
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	85246	87137	121606	transposase	Leptospira_phage(50.0%)	2	NA	NA
WP_141889259.1|85246_86405_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	43.3	2.4e-48
WP_141889260.1|86777_87137_-	helix-turn-helix domain-containing protein	NA	Q8W6G2	Sinorhizobium_phage	42.9	8.4e-16
>prophage 9
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	92994	98616	121606		Vibrio_phage(50.0%)	3	NA	NA
WP_141889299.1|92994_94320_+	DUF4942 domain-containing protein	NA	M4M9L8	Vibrio_phage	29.9	2.9e-13
WP_141889266.1|96001_96451_+	DUF3768 domain-containing protein	NA	NA	NA	NA	NA
WP_141889267.1|96756_98616_+	ParB N-terminal domain-containing protein	NA	G8DH78	Emiliania_huxleyi_virus	35.8	2.7e-81
>prophage 10
NZ_CP041157	Leisingera aquaemixtae strain R2C4 plasmid unnamed2, complete sequence	121606	105778	110085	121606	transposase	Bacillus_phage(33.33%)	5	NA	NA
WP_141889280.1|105778_106165_+	thermonuclease family protein	NA	A0A1P8CWK6	Bacillus_phage	38.7	1.3e-06
WP_141889300.1|106244_106562_+	H-NS histone family protein	NA	NA	NA	NA	NA
WP_141889203.1|106871_107900_-|transposase	IS110 family transposase	transposase	A0A1S7J231	Thermus_phage	28.8	1.8e-18
WP_141889281.1|108427_108811_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141889282.1|108906_110085_-	hypothetical protein	NA	A0A1D8KM27	Synechococcus_phage	34.5	7.5e-05
