The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	19294	60670	3628651	tail,portal,terminase,integrase,capsid	Listeria_phage(17.65%)	53	10818:10833	62300:62315
10818:10833	attL	ATTGTACAAAGAATTG	NA	NA	NA	NA
WP_110134071.1|19294_21778_-	hypothetical protein	NA	A0A2P0ZLF8	Lactobacillus_phage	30.0	6.1e-49
WP_110134072.1|21791_23474_-|tail	phage tail protein	tail	A0A059T682	Listeria_phage	33.6	1.9e-81
WP_110134073.1|23470_27514_-	tape measure protein	NA	Q8LTK2	Lactococcus_phage	45.9	6.9e-66
WP_029142825.1|27510_28128_-	hypothetical protein	NA	O03936	Lactobacillus_phage	40.4	4.6e-30
WP_029142824.1|28134_28560_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134074.1|28612_29083_-|capsid	capsid protein	capsid	O03972	Lactobacillus_phage	61.1	1.5e-44
WP_110134075.1|29088_29574_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029142848.1|29494_29848_-	hypothetical protein	NA	A0A1B1P872	Bacillus_phage	53.1	2.9e-29
WP_035176647.1|29852_30203_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134076.1|30269_30653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029142851.1|30655_30892_-	hypothetical protein	NA	B5LPR5	Bacillus_virus	46.8	7.4e-13
WP_110134077.1|30925_31855_-|capsid	capsid protein	capsid	A0A1B1P885	Bacillus_phage	62.7	3.9e-105
WP_029142853.1|31867_32539_-	hypothetical protein	NA	M9Q248	Clostridium_phage	34.8	1.9e-05
WP_110134078.1|32635_32893_-	hypothetical protein	NA	A0A1S5SBT9	Streptococcus_phage	57.6	1.2e-19
WP_110134079.1|32946_34056_-|capsid	minor capsid protein	capsid	B5LPR2	Bacillus_virus	43.8	2.8e-86
WP_110134080.1|34059_35586_-|portal	phage portal protein	portal	A0A1B1P863	Bacillus_phage	53.7	3.1e-136
WP_110134081.1|35598_36891_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1B1P869	Bacillus_phage	76.6	4.6e-197
WP_110134082.1|36859_37627_-	hypothetical protein	NA	A0A2P1JTW4	Anoxybacillus_phage	59.6	9.4e-65
WP_046721464.1|37700_37904_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134306.1|38168_38546_-	helix-turn-helix domain-containing protein	NA	A0A290FZR5	Caldibacillus_phage	50.8	4.5e-28
WP_110134083.1|38611_39136_-	hypothetical protein	NA	A0A0F7ILJ3	Polaribacter_phage	43.3	1.3e-25
WP_110134084.1|39149_39335_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134085.1|39419_39665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134086.1|39695_40472_-	phosphoadenosine phosphosulfate reductase family protein	NA	NA	NA	NA	NA
WP_110134087.1|40413_41130_-	CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6	NA	NA	NA	NA	NA
WP_110134088.1|41122_41806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134089.1|41802_42759_-	hypothetical protein	NA	A0A0N7CDP5	Skermania_phage	32.1	4.2e-22
WP_110134090.1|42760_42991_-	hypothetical protein	NA	NA	NA	NA	NA
WP_142010178.1|43059_43845_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134092.1|43936_44407_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_110134307.1|45100_45274_-	DUF3954 domain-containing protein	NA	NA	NA	NA	NA
WP_110134093.1|45374_45761_-	hypothetical protein	NA	H7BVT3	unidentified_phage	37.2	1.3e-11
WP_110134094.1|46253_46715_-	DUF1064 domain-containing protein	NA	A0A2P1JTY5	Anoxybacillus_phage	79.3	2.5e-57
WP_110134095.1|46724_47288_-	dUTPase	NA	R9TQ23	Paenibacillus_phage	48.9	3.0e-36
WP_110134096.1|47284_47482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134097.1|47643_47823_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134098.1|47822_48689_-	ATP-binding protein	NA	S6B1M2	Thermus_phage	72.2	3.2e-114
WP_110134099.1|48612_49428_-	hypothetical protein	NA	A0A1C8E9B4	Bacillus_phage	58.3	3.5e-25
WP_110134100.1|49483_50377_-	recombinase RecT	NA	A8ATY6	Listeria_phage	67.8	7.3e-93
WP_110134308.1|50376_51318_-	hypothetical protein	NA	A8ATY5	Listeria_phage	62.9	2.6e-109
WP_110134101.1|51420_51633_-	hypothetical protein	NA	A0A290GDU5	Caldibacillus_phage	42.0	1.4e-07
WP_029142711.1|51625_51865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029142709.1|52487_52772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_029142708.1|52771_53290_-	hypothetical protein	NA	A0A290FZK9	Caldibacillus_phage	40.5	3.7e-25
WP_035176495.1|53350_53536_-	helix-turn-helix domain-containing protein	NA	U5P0W4	Brevibacillus_phage	61.8	1.0e-09
WP_029142707.1|53537_54329_-	hypothetical protein	NA	A8ATY0	Listeria_phage	45.0	4.8e-56
WP_029142706.1|54329_54572_-	helix-turn-helix transcriptional regulator	NA	A8ATX6	Listeria_phage	54.2	2.1e-15
WP_029142705.1|54736_55141_+	helix-turn-helix transcriptional regulator	NA	A8ATX5	Listeria_phage	46.8	9.4e-08
WP_029142704.1|55164_55791_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A1L2JY13	Aeribacillus_phage	34.7	5.7e-20
WP_052472245.1|55828_56764_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_110134102.1|56809_58039_+	endonuclease	NA	A0A1P8CWK6	Bacillus_phage	70.4	2.6e-64
WP_110134103.1|58144_59374_+|integrase	site-specific integrase	integrase	A0A0K2CZ62	Paenibacillus_phage	43.4	1.3e-92
WP_014097579.1|59668_60670_+	potassium channel protein	NA	A0A1B0Y2S3	Lactobacillus_phage	50.0	2.9e-05
62300:62315	attR	ATTGTACAAAGAATTG	NA	NA	NA	NA
>prophage 2
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	780949	789262	3628651		Synechococcus_phage(33.33%)	8	NA	NA
WP_035190016.1|780949_781543_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	39.8	3.2e-28
WP_110134241.1|781535_782579_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.1	5.0e-61
WP_017550745.1|782598_784023_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.7	7.9e-49
WP_110134242.1|784007_786257_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	44.2	3.5e-168
WP_110134243.1|786240_786924_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_013860601.1|786920_787175_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_110134244.1|787167_787878_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SS43	Cyanophage	43.7	1.5e-48
WP_026684439.1|787966_789262_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.8	6.5e-18
>prophage 3
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	978862	1027591	3628651	tRNA,protease,bacteriocin,transposase,coat	Indivirus(16.67%)	38	NA	NA
WP_013858128.1|978862_980173_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_014096740.1|980464_981610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061577323.1|981622_982456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014096738.1|982452_983142_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	24.2	4.2e-08
WP_014096737.1|983138_983540_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014096736.1|983810_985412_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	51.4	1.0e-150
WP_014096735.1|985642_986227_-	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_017550321.1|986342_986549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014096734.1|987238_987919_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.5	8.1e-28
WP_104851084.1|990343_992029_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_110134265.1|992592_995847_-	methylmalonyl-CoA mutase	NA	NA	NA	NA	NA
WP_017550324.1|995932_996568_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_035183210.1|996587_997730_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_013860764.1|997763_998900_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_035183208.1|998941_1000120_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_035190064.1|1000847_1002992_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
WP_035190066.1|1003203_1004403_+	phospholipase D	NA	NA	NA	NA	NA
WP_110134266.1|1004681_1006352_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_035190070.1|1006348_1006789_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_017550332.1|1006944_1007817_-	agmatinase	NA	NA	NA	NA	NA
WP_035183221.1|1007996_1010048_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_035183194.1|1010154_1010667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017550335.1|1010697_1011360_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_071646869.1|1011475_1011691_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
WP_017550336.1|1011705_1012224_-	hypothetical protein	NA	NA	NA	NA	NA
WP_017550337.1|1012241_1013558_-	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	27.7	6.6e-26
WP_017550339.1|1014050_1014761_+	RsfA family transcriptional regulator	NA	A0A1D6X8E5	Bacillus_phage	50.0	4.1e-06
WP_035183189.1|1016150_1016984_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
WP_014096714.1|1017763_1018735_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
WP_014096713.1|1018904_1019660_+	heme-dependent peroxidase	NA	NA	NA	NA	NA
WP_029143103.1|1019820_1020270_+|coat	spore coat protein GerQ	coat	NA	NA	NA	NA
WP_110134267.1|1020309_1020681_-	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_014096710.1|1020852_1021110_-	YwdI family protein	NA	NA	NA	NA	NA
WP_026684560.1|1021559_1022246_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	45.1	3.4e-50
WP_026684561.1|1022395_1022743_+	general stress protein	NA	NA	NA	NA	NA
WP_017550349.1|1022867_1023140_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_017550351.1|1023619_1023847_+|bacteriocin	circular bacteriocin, circularin A/uberolysin family	bacteriocin	NA	NA	NA	NA
WP_046722045.1|1026070_1027591_+|transposase	IS5-like element ISBco3 family transposase	transposase	NA	NA	NA	NA
>prophage 4
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	1123785	1131848	3628651	protease	Staphylococcus_phage(66.67%)	10	NA	NA
WP_014096622.1|1123785_1124280_-	single-stranded DNA-binding protein	NA	A8ATZ7	Listeria_phage	67.7	2.8e-54
WP_014096621.1|1124341_1124629_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
WP_014096620.1|1124882_1125353_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	55.9	2.2e-40
WP_014096619.1|1125365_1126559_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	54.1	7.1e-112
WP_014096618.1|1126576_1127224_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	44.8	8.8e-40
WP_142010213.1|1127204_1128326_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	37.0	2.9e-54
WP_014096616.1|1128647_1129748_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_013860891.1|1129908_1130109_-	DUF951 domain-containing protein	NA	NA	NA	NA	NA
WP_014096615.1|1130098_1131010_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
WP_017550665.1|1131224_1131848_+|protease	spore protease YyaC	protease	G3M9W0	Bacillus_virus	38.5	3.6e-22
>prophage 5
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	1349622	1391369	3628651	transposase,protease	uncultured_Caudovirales_phage(50.0%)	35	NA	NA
WP_043052509.1|1349622_1350933_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014096450.1|1351472_1352684_-	MFS transporter	NA	NA	NA	NA	NA
WP_110133726.1|1352776_1353352_-	glycine-rich domain-containing protein-like	NA	A0A2I2L429	Orpheovirus	33.3	1.8e-07
WP_035182786.1|1353992_1355135_-	MFS transporter	NA	NA	NA	NA	NA
WP_110133727.1|1355332_1356181_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_104851084.1|1356315_1358001_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_110133728.1|1358595_1359327_-	NAD-dependent protein deacylase	NA	A0A068EPD4	Bacillus_phage	41.0	4.2e-46
WP_014096446.1|1359678_1361412_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	44.3	3.0e-10
WP_014096445.1|1361490_1362348_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_014096444.1|1362340_1362901_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_014096443.1|1362893_1363217_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_110133729.1|1363557_1365312_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	49.4	1.4e-10
WP_014096441.1|1365485_1366892_-	MFS transporter	NA	NA	NA	NA	NA
WP_014096440.1|1366958_1367528_-	cysteine hydrolase	NA	NA	NA	NA	NA
WP_014096439.1|1367639_1368242_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_026104499.1|1368390_1368849_-	hypothetical protein	NA	NA	NA	NA	NA
WP_026104498.1|1368854_1369643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014096438.1|1369949_1370237_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014096437.1|1370229_1371396_+	MFS transporter	NA	NA	NA	NA	NA
WP_014096436.1|1371422_1372325_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
WP_046721642.1|1372386_1372611_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014096435.1|1372626_1373715_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_026104497.1|1373895_1374195_+	YkvR family protein	NA	NA	NA	NA	NA
WP_061577476.1|1374191_1375187_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_014096432.1|1376441_1377671_-	MFS transporter	NA	NA	NA	NA	NA
WP_017550282.1|1378026_1378566_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_014096428.1|1378881_1379370_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_013858128.1|1380090_1381401_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_013858307.1|1382495_1384181_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_017550280.1|1384515_1385136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014096424.1|1385348_1386617_+	MFS transporter	NA	NA	NA	NA	NA
WP_014096423.1|1386814_1387255_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_110133730.1|1387467_1388259_+	DUF2837 family protein	NA	NA	NA	NA	NA
WP_110133731.1|1388454_1389195_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_110133732.1|1390031_1391369_-|transposase	IS1380 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	1396267	1470206	3628651	transposase	Streptococcus_phage(40.0%)	57	NA	NA
WP_041847046.1|1396267_1397839_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	30.6	8.7e-49
WP_017550355.1|1398516_1399830_-|transposase	IS1380-like element ISBco1 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	48.8	7.1e-113
WP_110133733.1|1400041_1401781_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_110133734.1|1401773_1403582_+	ATP-dependent helicase	NA	NA	NA	NA	NA
WP_110133735.1|1403887_1404457_+	DNA recombinase	NA	A0A2K5B2B4	Erysipelothrix_phage	30.6	1.6e-16
WP_014096263.1|1404726_1406037_+|transposase	DDE transposase family protein	transposase	NA	NA	NA	NA
WP_012102963.1|1406613_1407840_+	macrolide efflux MFS transporter Mef(A)	NA	A0A1B0RXG2	Streptococcus_phage	95.3	1.9e-208
WP_110133736.1|1407953_1409417_+	Msr family ABC-F type ribosomal protection protein	NA	A0A1B0RXA0	Streptococcus_phage	89.7	2.1e-238
WP_110133737.1|1409973_1411083_+	FMN-binding glutamate synthase family protein	NA	NA	NA	NA	NA
WP_026314590.1|1411161_1412325_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_110133738.1|1412448_1413213_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_018664281.1|1413387_1414809_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_018664279.1|1414939_1415434_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_110133739.1|1416034_1416676_+	Vat family streptogramin A O-acetyltransferase	NA	A0A1V0SJ47	Klosneuvirus	35.7	3.9e-24
WP_039236463.1|1416780_1417659_+	AraC family transcriptional regulator	NA	D0R0F8	Streptococcus_phage	30.9	7.8e-31
WP_041901972.1|1419185_1419497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110133740.1|1420085_1420691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110133741.1|1422683_1423178_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108897630.1|1424654_1425248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108897631.1|1425353_1425896_+	hypothetical protein	NA	NA	NA	NA	NA
WP_108899067.1|1426097_1426742_+	signal peptidase I	NA	NA	NA	NA	NA
WP_110133742.1|1426807_1427485_+	hypothetical protein	NA	NA	NA	NA	NA
WP_034768474.1|1427584_1428118_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_110133743.1|1428887_1430282_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_110133744.1|1430421_1431147_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_080564932.1|1431665_1431851_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110133745.1|1432002_1433412_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.2	1.3e-35
WP_017552043.1|1433479_1434664_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
WP_048339812.1|1434807_1436223_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_014096414.1|1436670_1437849_+	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_014096413.1|1438085_1438424_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_014096412.1|1438553_1439012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014096411.1|1439174_1440152_+	D-glycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	28.2	7.6e-19
WP_017550607.1|1441479_1442433_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.6	2.4e-25
WP_017550606.1|1442425_1443955_+	ABC transporter permease/substrate-binding protein	NA	NA	NA	NA	NA
WP_014096407.1|1444487_1444970_+	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_104851095.1|1445000_1446419_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_014096405.1|1446547_1448224_+	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
WP_014096404.1|1448264_1448984_+	trehalose operon repressor	NA	NA	NA	NA	NA
WP_014096403.1|1449077_1450406_-	2-keto-3-deoxygluconate permease	NA	NA	NA	NA	NA
WP_014096401.1|1450807_1452364_-	gluconokinase	NA	NA	NA	NA	NA
WP_017550602.1|1452514_1453207_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_017550601.1|1453267_1454176_-	decarboxylating 6-phosphogluconate dehydrogenase	NA	A0A1D7RAP9	Synechococcus_phage	36.0	6.7e-54
WP_014096398.1|1454942_1455404_+	flavodoxin	NA	NA	NA	NA	NA
WP_052042116.1|1455400_1456486_+	excinuclease ABC subunit C	NA	NA	NA	NA	NA
WP_110133746.1|1456729_1457482_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_110133747.1|1457688_1459632_+	cation-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	38.8	1.4e-109
WP_026683770.1|1459653_1459875_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_014096391.1|1461208_1463443_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A0A0Y0AS84	Bacillus_phage	61.0	1.0e-260
WP_014096390.1|1463427_1463910_+	flavodoxin	NA	A0A060AL80	Listeria_phage	36.9	6.2e-14
WP_014096389.1|1463854_1464898_+	ribonucleotide-diphosphate reductase subunit beta	NA	A0A059T7I4	Listeria_phage	56.6	7.6e-110
WP_014096388.1|1465220_1465835_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_110133748.1|1465831_1466917_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_048339797.1|1467185_1468115_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_014096385.1|1468116_1468353_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014096384.1|1468349_1468613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110133749.1|1468790_1470206_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
>prophage 7
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	1717373	1779567	3628651	transposase,holin	Streptococcus_phage(14.29%)	46	NA	NA
WP_110133805.1|1717373_1718687_-|transposase	IS1380-like element ISBco1 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	48.8	9.3e-113
WP_014096168.1|1719202_1720534_+	MBL fold metallo-hydrolase	NA	Q0H255	Geobacillus_phage	57.7	6.0e-75
WP_013858348.1|1720549_1720762_+	DUF3006 domain-containing protein	NA	NA	NA	NA	NA
WP_014096165.1|1726368_1728024_+	APC family permease	NA	NA	NA	NA	NA
WP_110133806.1|1728149_1730366_-	peptidase	NA	NA	NA	NA	NA
WP_014096162.1|1730843_1731812_+	LCP family protein	NA	NA	NA	NA	NA
WP_014096161.1|1732153_1732519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014096159.1|1732656_1733574_-	aldo/keto reductase	NA	A0A1V0SDE7	Indivirus	29.3	2.4e-06
WP_110134283.1|1733755_1734667_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_110133807.1|1734668_1734920_+	hypothetical protein	NA	NA	NA	NA	NA
WP_017550185.1|1735050_1735374_+	DUF3870 domain-containing protein	NA	NA	NA	NA	NA
WP_061577482.1|1735642_1736854_-	butyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_046721832.1|1736858_1738037_-	CoA transferase	NA	NA	NA	NA	NA
WP_046721833.1|1738762_1739776_+	NADP-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_110133808.1|1740315_1741515_+	MFS transporter	NA	NA	NA	NA	NA
WP_110133809.1|1741673_1743536_+	transcription antiterminator	NA	NA	NA	NA	NA
WP_014096149.1|1743660_1743993_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA	NA
WP_110133810.1|1744010_1744340_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_014096147.1|1744373_1745459_+	DUF871 domain-containing protein	NA	NA	NA	NA	NA
WP_061087168.1|1745471_1746755_+	PTS cellobiose transporter subunit IIC	NA	NA	NA	NA	NA
WP_110133811.1|1746817_1748230_-	MFS transporter	NA	NA	NA	NA	NA
WP_110133812.1|1748706_1750125_-	amino acid permease	NA	NA	NA	NA	NA
WP_142010231.1|1750504_1751608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_110133813.1|1751795_1752986_+	glycine C-acetyltransferase	NA	D2TEZ5	Emiliania_huxleyi_virus	32.6	3.8e-49
WP_142010234.1|1753046_1754033_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_110133815.1|1754410_1754839_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_110133816.1|1754835_1756035_+	MFS transporter	NA	NA	NA	NA	NA
WP_017551896.1|1756373_1757360_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_110133817.1|1757554_1759552_+	beta-galactosidase	NA	NA	NA	NA	NA
WP_110133819.1|1759817_1760495_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_014096132.1|1760506_1761415_-	osmoprotectant ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_014096131.1|1761430_1762084_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_014096130.1|1762095_1763241_-|holin	betaine/proline/choline family ABC transporter ATP-binding protein	holin	F2Y1V5	Organic_Lake_phycodnavirus	28.8	1.5e-13
WP_014096129.1|1763425_1763971_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_017551900.1|1763985_1764546_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
WP_110134284.1|1764819_1765857_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	24.1	5.8e-09
WP_110133743.1|1766003_1767398_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_061577833.1|1767569_1768598_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_061577834.1|1768654_1769224_+	dihydrofolate reductase	NA	NA	NA	NA	NA
WP_013858390.1|1769724_1770018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110133820.1|1770168_1770741_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_035191172.1|1771044_1771860_+	SGNH/GDSL hydrolase family protein	NA	NA	NA	NA	NA
WP_035182475.1|1772483_1773200_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_110133821.1|1773640_1775050_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	30.5	1.5e-36
WP_014096121.1|1777070_1778648_+	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA	NA
WP_014096120.1|1778592_1779567_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 8
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	2130251	2136485	3628651		Streptococcus_phage(33.33%)	8	NA	NA
WP_110133866.1|2130251_2131199_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.1	9.1e-86
WP_110133867.1|2131725_2131929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014095823.1|2132037_2132496_+	8-oxo-dGTP diphosphatase	NA	K4F7D9	Cronobacter_phage	33.3	6.9e-07
WP_014095822.1|2132532_2133423_+	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	4.3e-05
WP_061086719.1|2133419_2134400_+	YvcK family protein	NA	A1IMD5	Streptococcus_phage	44.6	1.2e-67
WP_013858691.1|2134480_2135434_+	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.1	9.2e-54
WP_014095819.1|2135544_2135814_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_035182139.1|2135900_2136485_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	56.0	1.3e-53
>prophage 9
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	3294022	3353851	3628651	coat,tRNA,protease	Moraxella_phage(28.57%)	58	NA	NA
WP_014097876.1|3294022_3295294_-|coat	SafA/ExsA family spore coat assembly protein	coat	S6BFI4	Thermus_phage	55.6	6.2e-05
WP_026683597.1|3295480_3296038_+	transcription repressor NadR	NA	NA	NA	NA	NA
WP_014097874.1|3296165_3297011_-	prephenate dehydratase	NA	NA	NA	NA	NA
WP_014097873.1|3297036_3297489_-	ACT domain-containing protein	NA	NA	NA	NA	NA
WP_017551053.1|3297537_3298830_-	GTPase ObgE	NA	NA	NA	NA	NA
WP_026683598.1|3298864_3299401_-	sporulation protein	NA	NA	NA	NA	NA
WP_013859801.1|3299606_3299897_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
WP_014097870.1|3299909_3300239_-|protease	ribosomal-processing cysteine protease Prp	protease	NA	NA	NA	NA
WP_013859803.1|3300251_3300560_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
WP_035184501.1|3300702_3302181_-	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_014097868.1|3302232_3303099_-	stage IV sporulation protein FB	NA	NA	NA	NA	NA
WP_017551058.1|3303091_3303844_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_110134027.1|3303970_3304780_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_035184496.1|3304772_3305465_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_017551061.1|3305689_3306208_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_017551062.1|3306207_3307074_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_017551063.1|3307180_3308197_-	rod shape-determining protein	NA	NA	NA	NA	NA
WP_017551064.1|3308370_3309054_-	JAB domain-containing protein	NA	NA	NA	NA	NA
WP_014097863.1|3309253_3310237_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014097862.1|3310355_3311117_-	prepilin peptidase	NA	NA	NA	NA	NA
WP_014097861.1|3311224_3311929_-	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA	NA
WP_014097860.1|3311925_3312774_-	PilN domain-containing protein	NA	NA	NA	NA	NA
WP_026683603.1|3312774_3313773_-	pilus assembly protein PilM	NA	NA	NA	NA	NA
WP_014097858.1|3313865_3314288_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_014097857.1|3314370_3315576_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_014097856.1|3315562_3316615_-	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_014097855.1|3316624_3318286_-	Flp pilus assembly complex ATPase component	NA	NA	NA	NA	NA
WP_035184493.1|3318331_3319786_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014097853.1|3319802_3320531_-	photosystem reaction center subunit H	NA	NA	NA	NA	NA
WP_110134028.1|3320557_3322303_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110134029.1|3322430_3324092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035188277.1|3324091_3324601_-	pilin	NA	NA	NA	NA	NA
WP_035188280.1|3324597_3325017_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_110134030.1|3325135_3326458_-	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
WP_026683610.1|3326520_3329166_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0S951	Catovirus	43.9	8.8e-163
WP_014097848.1|3329592_3329784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014097847.1|3329800_3330985_-|coat	spore coat protein YsxE	coat	NA	NA	NA	NA
WP_110134031.1|3331015_3332833_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_014097845.1|3333218_3334508_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	A0A1V0SKB7	Klosneuvirus	27.6	4.4e-06
WP_014097844.1|3334523_3335501_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_110134032.1|3335737_3336526_-	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_014097842.1|3336522_3337455_-	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
WP_014097841.1|3337467_3338292_-	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_014097840.1|3338307_3339639_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
WP_014097839.1|3339824_3340319_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014097838.1|3340495_3341080_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_061565532.1|3341076_3343401_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	44.5	4.8e-181
WP_061565531.1|3343444_3345082_-|protease	ATP-dependent protease LonB	protease	A0A0R6PGP8	Moraxella_phage	36.4	5.0e-15
WP_014097835.1|3345373_3346642_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	67.4	5.4e-150
WP_061565530.1|3347010_3348297_-	trigger factor	NA	NA	NA	NA	NA
WP_014097833.1|3348460_3349453_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_014097832.1|3349592_3350036_-	YndM family protein	NA	NA	NA	NA	NA
WP_061086562.1|3350170_3350467_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014097829.1|3350945_3351455_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_014097828.1|3351451_3352060_-	XTP/dITP diphosphatase	NA	A0A2H4UUV7	Bodo_saltans_virus	33.3	8.1e-11
WP_014097827.1|3352167_3353208_-	sporulation protein	NA	NA	NA	NA	NA
WP_110134033.1|3353351_3353552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071451963.1|3353548_3353851_+|coat	spore coat protein	coat	NA	NA	NA	NA
>prophage 10
NZ_CP033687	Bacillus coagulans strain DSM 2314 chromosome, complete genome	3628651	3569449	3606793	3628651	transposase,bacteriocin	Bacillus_phage(37.5%)	36	NA	NA
WP_046721937.1|3569449_3570100_-|bacteriocin	putative bacteriocin export ABC transporter	bacteriocin	G9BWD6	Planktothrix_phage	30.7	1.6e-20
WP_110134052.1|3570101_3571082_-	DUF1430 domain-containing protein	NA	NA	NA	NA	NA
WP_104851084.1|3571223_3572909_-|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_110134053.1|3572952_3574248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_035191149.1|3574545_3574725_-	hypothetical protein	NA	NA	NA	NA	NA
WP_061577719.1|3575025_3575931_-	DMT family transporter	NA	NA	NA	NA	NA
WP_013860047.1|3576021_3576711_+	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	35.7	3.0e-14
WP_081106251.1|3576846_3577971_-	DUF1646 family protein	NA	NA	NA	NA	NA
WP_061565795.1|3578480_3578867_-	MFS transporter	NA	NA	NA	NA	NA
WP_142010266.1|3579174_3580860_+|transposase	IS1634 family transposase	transposase	NA	NA	NA	NA
WP_104851503.1|3581126_3583538_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	38.0	4.8e-115
WP_104851504.1|3583631_3583838_-	copper chaperone CopZ	NA	NA	NA	NA	NA
WP_013860052.1|3583852_3584197_-	metal-sensing transcriptional repressor	NA	NA	NA	NA	NA
WP_104851505.1|3584476_3585892_+|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
WP_110134054.1|3586224_3587529_+|transposase	IS1380-like element ISBco2 family transposase	transposase	NA	NA	NA	NA
WP_081110520.1|3587684_3587957_+	metal-sensing transcriptional repressor	NA	NA	NA	NA	NA
WP_061566880.1|3588057_3588468_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_104851507.1|3588574_3588994_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_104851508.1|3589021_3589204_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104851509.1|3589274_3590462_+	amidohydrolase	NA	NA	NA	NA	NA
WP_013860056.1|3590522_3590717_+	DUF3311 domain-containing protein	NA	NA	NA	NA	NA
WP_046721674.1|3590713_3592183_+	sodium:solute symporter	NA	NA	NA	NA	NA
WP_013860060.1|3592854_3593073_-	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_013860062.1|3593289_3593727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_046721673.1|3593757_3595155_+	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	34.8	9.8e-36
WP_017554156.1|3595129_3595804_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.6	3.8e-38
WP_013860065.1|3595875_3596430_-	YdhK family protein	NA	NA	NA	NA	NA
WP_080952267.1|3596610_3597222_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_046721671.1|3597235_3597889_-	lipoprotein	NA	NA	NA	NA	NA
WP_026685174.1|3597885_3598821_-	polysaccharide deacetylase	NA	A0A1V0SLN0	Klosneuvirus	25.7	3.7e-07
WP_110134055.1|3600601_3601933_-	chloride channel protein	NA	NA	NA	NA	NA
WP_014097608.1|3602399_3602696_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	39.6	4.2e-13
WP_014097607.1|3602777_3603038_-	metal-sensitive transcriptional regulator	NA	NA	NA	NA	NA
WP_035184240.1|3603619_3604408_+	endonuclease	NA	A0A1P8CWK6	Bacillus_phage	65.2	1.4e-60
WP_017551018.1|3604510_3605020_-	PTS glucose transporter subunit IIA	NA	NA	NA	NA	NA
WP_142010269.1|3605377_3606793_-|transposase	ISLre2 family transposase	transposase	NA	NA	NA	NA
