assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006575665.1_ASM657566v1	NZ_CP041253	Echinicola sp. LN3S3 chromosome, complete genome	1	553816-553913	1	CRISPRCasFinder	no		cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	Orphan	CATTTTGGTGATAATTATTATTTA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	NA|735aa|up_8|NZ_CP041253.1_535694_537899_-,NA|522aa|up_2|NZ_CP041253.1_548384_549950_+,NA|76aa|down_0|NZ_CP041253.1_554532_554760_+,NA|94aa|down_5|NZ_CP041253.1_564011_564293_-	NA|840aa|up_9|NZ_CP041253.1_533156_535676_+	sd00038, Kelch, Kelch repeat	NA|735aa|up_8|NZ_CP041253.1_535694_537899_-	NA	NA|272aa|up_7|NZ_CP041253.1_538326_539142_-	pfam12866, DUF3823, Protein of unknown function (DUF3823)	NA|686aa|up_6|NZ_CP041253.1_539169_541227_-	pfam07980, SusD_RagB, SusD family	NA|1076aa|up_5|NZ_CP041253.1_541360_544588_-	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|482aa|up_4|NZ_CP041253.1_544687_546133_-	pfam03663, Glyco_hydro_76, Glycosyl hydrolase family 76	NA|604aa|up_3|NZ_CP041253.1_546149_547961_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|522aa|up_2|NZ_CP041253.1_548384_549950_+	NA	NA|77aa|up_1|NZ_CP041253.1_550391_550622_-	cd10449, GIY-YIG_SLX1_like, Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its homologs	NA|420aa|up_0|NZ_CP041253.1_550857_552117_+	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain	NA|76aa|down_0|NZ_CP041253.1_554532_554760_+	NA	NA|576aa|down_1|NZ_CP041253.1_555509_557237_+	smart00748, HEPN, Higher Eukarytoes and Prokaryotes Nucleotide-binding domain	NA|1139aa|down_2|NZ_CP041253.1_557281_560698_+	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|427aa|down_3|NZ_CP041253.1_560656_561937_-	pfam10117, McrBC, McrBC 5-methylcytosine restriction system component	NA|498aa|down_4|NZ_CP041253.1_561959_563453_-	PRK11331, PRK11331, 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional	NA|94aa|down_5|NZ_CP041253.1_564011_564293_-	NA	NA|159aa|down_6|NZ_CP041253.1_564289_564766_-	cd02587, HAD_5-3dNT, 5'(3')-deoxyribonucleotidase	NA|365aa|down_7|NZ_CP041253.1_564791_565886_-	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase	NA|165aa|down_8|NZ_CP041253.1_565895_566390_-	pfam13238, AAA_18, AAA domain	NA|133aa|down_9|NZ_CP041253.1_566858_567257_-	pfam12844, HTH_19, Helix-turn-helix domain
GCF_006575665.1_ASM657566v1	NZ_CP041253	Echinicola sp. LN3S3 chromosome, complete genome	2	1524620-1524715	2	CRISPRCasFinder	no		cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	Orphan	CCTGATTATTGACCATCAATCGCTGAATACC	31	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	NA|182aa|up_6|NZ_CP041253.1_1514689_1515235_-,NA|163aa|down_0|NZ_CP041253.1_1524755_1525244_-,NA|169aa|down_4|NZ_CP041253.1_1529702_1530209_-,NA|106aa|down_8|NZ_CP041253.1_1534133_1534451_-	NA|263aa|up_9|NZ_CP041253.1_1509763_1510552_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|205aa|up_8|NZ_CP041253.1_1510804_1511419_+	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|999aa|up_7|NZ_CP041253.1_1511582_1514579_+	pfam13502, AsmA_2, AsmA-like C-terminal region	NA|182aa|up_6|NZ_CP041253.1_1514689_1515235_-	NA	NA|508aa|up_5|NZ_CP041253.1_1515270_1516794_-	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|433aa|up_4|NZ_CP041253.1_1517029_1518328_-	PRK11649, PRK11649, putative peptidase; Provisional	NA|585aa|up_3|NZ_CP041253.1_1518609_1520364_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|195aa|up_2|NZ_CP041253.1_1520991_1521576_+	pfam00160, Pro_isomerase, Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	NA|207aa|up_1|NZ_CP041253.1_1521581_1522202_-	pfam05036, SPOR, Sporulation related domain	NA|467aa|up_0|NZ_CP041253.1_1522346_1523747_-	PRK00485, fumC, fumarate hydratase; Reviewed	NA|163aa|down_0|NZ_CP041253.1_1524755_1525244_-	NA	NA|128aa|down_1|NZ_CP041253.1_1525270_1525654_-	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase	NA|567aa|down_2|NZ_CP041253.1_1525917_1527618_-	smart00656, Amb_all, Amb_all domain	NA|504aa|down_3|NZ_CP041253.1_1527950_1529462_+	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase	NA|169aa|down_4|NZ_CP041253.1_1529702_1530209_-	NA	NA|232aa|down_5|NZ_CP041253.1_1530220_1530916_-	pfam16266, DUF4919, Domain of unknown function (DUF4919)	NA|533aa|down_6|NZ_CP041253.1_1531234_1532833_+	cd10329, SLC5sbd_SGLT1-like, Na(+)/glucose cotransporter SGLT1 and related proteins; solute binding domain	NA|412aa|down_7|NZ_CP041253.1_1532892_1534128_+	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA	NA|106aa|down_8|NZ_CP041253.1_1534133_1534451_-	NA	NA|442aa|down_9|NZ_CP041253.1_1534447_1535773_-	pfam03929, PepSY_TM, PepSY-associated TM region
GCF_006575665.1_ASM657566v1	NZ_CP041253	Echinicola sp. LN3S3 chromosome, complete genome	3	3420710-3420828	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	Orphan	GCACGCAGATGTCGCAGATTGCTTAAGATT	30	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	NA|118aa|up_5|NZ_CP041253.1_3412964_3413318_+,NA|122aa|up_4|NZ_CP041253.1_3413330_3413696_+,NA	NA|429aa|up_9|NZ_CP041253.1_3408915_3410202_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|290aa|up_8|NZ_CP041253.1_3410700_3411570_-	cd13637, PBP2_Ca3427_like, The conserved hypothetical protein Ca3427 exhibits the type 2 periplasmic-binding protein fold	NA|146aa|up_7|NZ_CP041253.1_3411720_3412158_-	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases	NA|167aa|up_6|NZ_CP041253.1_3412411_3412912_+	COG1510, COG1510, Predicted transcriptional regulators [Transcription]	NA|118aa|up_5|NZ_CP041253.1_3412964_3413318_+	NA	NA|122aa|up_4|NZ_CP041253.1_3413330_3413696_+	NA	NA|308aa|up_3|NZ_CP041253.1_3413708_3414632_+	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	NA|592aa|up_2|NZ_CP041253.1_3414751_3416527_+	pfam16927, HisKA_7TM, N-terminal 7TM region of histidine kinase	NA|454aa|up_1|NZ_CP041253.1_3416561_3417923_-	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters	NA|809aa|up_0|NZ_CP041253.1_3418005_3420432_-	COG1501, COG1501, Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]	NA|345aa|down_0|NZ_CP041253.1_3420878_3421913_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|989aa|down_1|NZ_CP041253.1_3422277_3425244_+	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family	NA|530aa|down_2|NZ_CP041253.1_3425263_3426853_+	NF033071, SusD, starch-binding outer membrane lipoprotein SusD	NA|347aa|down_3|NZ_CP041253.1_3426871_3427912_+	cd12967, CBM_SusE-F_like_u1, Uncharacterized subgroup of the CBM-SusE-F_like superfamily	NA|354aa|down_4|NZ_CP041253.1_3428672_3429734_+	PRK09197, PRK09197, fructose-bisphosphate aldolase; Provisional	NA|520aa|down_5|NZ_CP041253.1_3430130_3431690_+	cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	NA|170aa|down_6|NZ_CP041253.1_3431912_3432422_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|152aa|down_7|NZ_CP041253.1_3432807_3433263_+	PRK05571, PRK05571, ribose-5-phosphate isomerase B; Provisional	NA|466aa|down_8|NZ_CP041253.1_3433303_3434701_+	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|502aa|down_9|NZ_CP041253.1_3434741_3436247_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated
GCF_006575665.1_ASM657566v1	NZ_CP041253	Echinicola sp. LN3S3 chromosome, complete genome	4	4750345-4751226	1,4	PILER-CR,CRISPRCasFinder	no	cas9,cas1,cas2	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	 Type II-B,Type II-A, or Type II-C?,Type II-B,Type II-C	GCTGTGATTACCATTGCAAGGTATAAGTCTGAAAGCAATTCACAAC,GCTGTGATTACCATTGCAAGGTATAAGTCTGAAAGCAATTCACAAC	46,46	0	0	NA	NA	NA:NA	11,11	11	TypeII-B,TypeII-A,orTypeII-C?,TypeII-B,TypeII-C	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	NA|548aa|up_7|NZ_CP041253.1_4735990_4737634_+,NA|84aa|up_5|NZ_CP041253.1_4739913_4740165_+,NA|98aa|down_2|NZ_CP041253.1_4753216_4753510_-	NA|922aa|up_9|NZ_CP041253.1_4732041_4734807_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|391aa|up_8|NZ_CP041253.1_4734813_4735986_+	pfam14054, DUF4249, Domain of unknown function (DUF4249)	NA|548aa|up_7|NZ_CP041253.1_4735990_4737634_+	NA	NA|583aa|up_6|NZ_CP041253.1_4737799_4739548_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|84aa|up_5|NZ_CP041253.1_4739913_4740165_+	NA	cas9|1808aa|up_4|NZ_CP041253.1_4740166_4745590_+	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	cas1|298aa|up_3|NZ_CP041253.1_4745593_4746487_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|116aa|up_2|NZ_CP041253.1_4746479_4746827_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|240aa|up_1|NZ_CP041253.1_4747021_4747741_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|527aa|up_0|NZ_CP041253.1_4747753_4749334_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|500aa|down_0|NZ_CP041253.1_4751293_4752793_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|113aa|down_1|NZ_CP041253.1_4752869_4753208_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|98aa|down_2|NZ_CP041253.1_4753216_4753510_-	NA	NA|418aa|down_3|NZ_CP041253.1_4754307_4755561_-	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|333aa|down_4|NZ_CP041253.1_4755673_4756672_-	PRK13971, PRK13971, 4-hydroxyproline epimerase	NA|479aa|down_5|NZ_CP041253.1_4756999_4758436_-	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|304aa|down_6|NZ_CP041253.1_4758435_4759347_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|438aa|down_7|NZ_CP041253.1_4759588_4760902_+	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|68aa|down_8|NZ_CP041253.1_4760894_4761098_+	pfam02609, Exonuc_VII_S, Exonuclease VII small subunit	NA|215aa|down_9|NZ_CP041253.1_4761155_4761800_-	COG1309, AcrR, Transcriptional regulator [Transcription]
GCF_006575665.1_ASM657566v1	NZ_CP041253	Echinicola sp. LN3S3 chromosome, complete genome	5	4753590-4753939	2,5	PILER-CR,CRISPRCasFinder	no	cas9,cas1,cas2	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	 Type II-B,Type II-A, or Type II-C?,Type II-B,Type II-C	GCTGTGATTACCATTGCAAGGTATAAGTCTGAAAGCAATTCACAAC,GCTGTGATTACCATTGCAAGGTATAAGTCTGAAAGCAATTCACAAC	46,46	0	0	NA	NA	NA:NA	3,4	4	TypeII-B,TypeII-A,orTypeII-C?,TypeII-B,TypeII-C	cas3,csa3,DEDDh,Cas9_archaeal,cas6,WYL,cas9,cas1,cas2,PrimPol	NA|84aa|up_8|NZ_CP041253.1_4739913_4740165_+,NA|98aa|up_0|NZ_CP041253.1_4753216_4753510_-,NA|164aa|down_8|NZ_CP041253.1_4764425_4764917_+	NA|583aa|up_9|NZ_CP041253.1_4737799_4739548_-	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|84aa|up_8|NZ_CP041253.1_4739913_4740165_+	NA	cas9|1808aa|up_7|NZ_CP041253.1_4740166_4745590_+	pfam18541, RuvC_III, RuvC endonuclease subdomain 3	cas1|298aa|up_6|NZ_CP041253.1_4745593_4746487_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|116aa|up_5|NZ_CP041253.1_4746479_4746827_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|240aa|up_4|NZ_CP041253.1_4747021_4747741_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|527aa|up_3|NZ_CP041253.1_4747753_4749334_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|500aa|up_2|NZ_CP041253.1_4751293_4752793_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|113aa|up_1|NZ_CP041253.1_4752869_4753208_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|98aa|up_0|NZ_CP041253.1_4753216_4753510_-	NA	NA|418aa|down_0|NZ_CP041253.1_4754307_4755561_-	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|333aa|down_1|NZ_CP041253.1_4755673_4756672_-	PRK13971, PRK13971, 4-hydroxyproline epimerase	NA|479aa|down_2|NZ_CP041253.1_4756999_4758436_-	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase	NA|304aa|down_3|NZ_CP041253.1_4758435_4759347_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|438aa|down_4|NZ_CP041253.1_4759588_4760902_+	TIGR00237, exodeoxyribonuclease_VII_large_subunit, exodeoxyribonuclease VII, large subunit	NA|68aa|down_5|NZ_CP041253.1_4760894_4761098_+	pfam02609, Exonuc_VII_S, Exonuclease VII small subunit	NA|215aa|down_6|NZ_CP041253.1_4761155_4761800_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|821aa|down_7|NZ_CP041253.1_4761942_4764405_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|164aa|down_8|NZ_CP041253.1_4764425_4764917_+	NA	NA|287aa|down_9|NZ_CP041253.1_4764919_4765780_+	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional
