assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006547025.1_ASM654702v1	NZ_CP041236	Pseudomonas azotoformans strain P45A chromosome, complete genome	1	120703-120813	1	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL,RT	Orphan	TGTAGCTTAGTTGGTTAGAGCGCACCCC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL,RT	NA|124aa|up_0|NZ_CP041236.1_118652_119024_-,NA	NA|62aa|up_9|NZ_CP041236.1_108992_109178_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|72aa|up_8|NZ_CP041236.1_109436_109652_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|498aa|up_7|NZ_CP041236.1_109970_111464_-	TIGR03458, Propionyl-CoA:succinate_CoA_transferase, succinate CoA transferase	NA|479aa|up_6|NZ_CP041236.1_111643_113080_-	COG1282, PntB, NAD/NADP transhydrogenase beta subunit [Energy production and conversion]	NA|107aa|up_5|NZ_CP041236.1_113079_113400_-	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|374aa|up_4|NZ_CP041236.1_113415_114537_-	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|310aa|up_3|NZ_CP041236.1_114989_115919_-	cd08481, PBP2_GcdR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators GcdR-like, contains the type 2 periplasmic binding fold	NA|394aa|up_2|NZ_CP041236.1_116047_117229_+	cd01151, GCD, Glutaryl-CoA dehydrogenase	NA|407aa|up_1|NZ_CP041236.1_117241_118462_+	COG1804, CaiB, Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]	NA|124aa|up_0|NZ_CP041236.1_118652_119024_-	NA	NA|627aa|down_0|NZ_CP041236.1_124974_126855_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|155aa|down_1|NZ_CP041236.1_126893_127358_-	cd07821, PYR_PYL_RCAR_like, Pyrabactin resistance 1 (PYR1), PYR1-like (PYL), regulatory component of abscisic acid receptors (RCARs), and related proteins	NA|1126aa|down_2|NZ_CP041236.1_127377_130755_-	cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS)	NA|313aa|down_3|NZ_CP041236.1_130751_131690_-	pfam11583, AurF, P-aminobenzoate N-oxygenase AurF	NA|253aa|down_4|NZ_CP041236.1_131686_132445_-	pfam11251, DUF3050, Protein of unknown function (DUF3050)	NA|236aa|down_5|NZ_CP041236.1_132783_133491_-	COG1802, GntR, Transcriptional regulators [Transcription]	NA|298aa|down_6|NZ_CP041236.1_133757_134651_+	COG2175, TauD, Probable taurine catabolism dioxygenase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|342aa|down_7|NZ_CP041236.1_134665_135691_+	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism]	NA|284aa|down_8|NZ_CP041236.1_135692_136544_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|283aa|down_9|NZ_CP041236.1_136556_137405_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]
GCF_006547025.1_ASM654702v1	NZ_CP041236	Pseudomonas azotoformans strain P45A chromosome, complete genome	2	2200302-2200412	2	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL,RT	Orphan	TGTAGCTTAGTTGGTTAGAGCGCACCCC	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL,RT	NA|100aa|up_6|NZ_CP041236.1_2192733_2193033_-,NA|90aa|up_5|NZ_CP041236.1_2193031_2193301_+,NA|94aa|up_2|NZ_CP041236.1_2196650_2196932_-,NA|124aa|up_0|NZ_CP041236.1_2198251_2198623_-,NA	NA|396aa|up_9|NZ_CP041236.1_2189674_2190862_-	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C	NA|380aa|up_8|NZ_CP041236.1_2190917_2192057_-	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional	NA|188aa|up_7|NZ_CP041236.1_2192066_2192630_-	TIGR03566, FMN_reduc_MsuE, FMN reductase, MsuE subfamily	NA|100aa|up_6|NZ_CP041236.1_2192733_2193033_-	NA	NA|90aa|up_5|NZ_CP041236.1_2193031_2193301_+	NA	NA|387aa|up_4|NZ_CP041236.1_2193535_2194696_+	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|603aa|up_3|NZ_CP041236.1_2194735_2196544_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|94aa|up_2|NZ_CP041236.1_2196650_2196932_-	NA	NA|296aa|up_1|NZ_CP041236.1_2197097_2197985_-	PRK10532, PRK10532, threonine and homoserine efflux system; Provisional	NA|124aa|up_0|NZ_CP041236.1_2198251_2198623_-	NA	NA|631aa|down_0|NZ_CP041236.1_2204240_2206133_+	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|134aa|down_1|NZ_CP041236.1_2206134_2206536_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|156aa|down_2|NZ_CP041236.1_2206635_2207103_+	cd08898, SRPBCC_CalC_Aha1-like_5, Putative hydrophobic ligand-binding SRPBCC domain of an uncharacterized subgroup of CalC- and Aha1-like proteins	NA|746aa|down_3|NZ_CP041236.1_2207182_2209420_-	TIGR01783, Ferrienterobactin_receptor, TonB-dependent siderophore receptor	NA|786aa|down_4|NZ_CP041236.1_2209639_2211997_+	PRK05762, PRK05762, DNA polymerase II; Reviewed	NA|193aa|down_5|NZ_CP041236.1_2212067_2212646_+	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|211aa|down_6|NZ_CP041236.1_2212658_2213291_+	cd03057, GST_N_Beta, GST_N family, Class Beta subfamily; GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins and products of oxidative stress	NA|192aa|down_7|NZ_CP041236.1_2213455_2214031_+	pfam13778, DUF4174, Domain of unknown function (DUF4174)	NA|345aa|down_8|NZ_CP041236.1_2214067_2215102_-	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|470aa|down_9|NZ_CP041236.1_2215124_2216534_-	COG0728, MviN, Uncharacterized membrane protein, putative virulence factor [General function prediction only]
GCF_006547025.1_ASM654702v1	NZ_CP041236	Pseudomonas azotoformans strain P45A chromosome, complete genome	3	4400255-4400486	1	PILER-CR	no	csa3	DEDDh,DinG,csa3,cas3,WYL,RT	Type I-A	CAGACACAACACAAATCAAAGGTGGGAGGGGGCAAGCCTCCTCCCACATT	50	0	0	NA	NA	NA	2	2	Orphan	DEDDh,DinG,csa3,cas3,WYL,RT	NA,NA	NA|631aa|up_9|NZ_CP041236.1_4390367_4392260_+	TIGR03075, PQQ_enz_alc_DH, PQQ-dependent dehydrogenase, methanol/ethanol family	NA|216aa|up_8|NZ_CP041236.1_4392487_4393135_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|209aa|up_7|NZ_CP041236.1_4393170_4393797_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|421aa|up_6|NZ_CP041236.1_4393793_4395056_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|391aa|up_5|NZ_CP041236.1_4395224_4396397_+	TIGR03863, PQQ_ABC_bind, ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system	NA|320aa|up_4|NZ_CP041236.1_4396427_4397387_+	TIGR03866, PQQ_ABC_repeats, PQQ-dependent catabolism-associated beta-propeller protein	NA|247aa|up_3|NZ_CP041236.1_4397383_4398124_+	TIGR03864, PQQ_ABC_ATP, ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system	NA|264aa|up_2|NZ_CP041236.1_4398120_4398912_+	TIGR03861, ABC_efflux_transporter_permease_protein, alcohol ABC transporter, permease protein	NA|183aa|up_1|NZ_CP041236.1_4399019_4399568_+	TIGR03865, PQQ_CXXCW, PQQ-dependent catabolism-associated CXXCW motif protein	NA|222aa|up_0|NZ_CP041236.1_4399583_4400249_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|647aa|down_0|NZ_CP041236.1_4400515_4402456_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|382aa|down_1|NZ_CP041236.1_4402397_4403543_-	COG3287, COG3287, Uncharacterized conserved protein [Function unknown]	NA|269aa|down_2|NZ_CP041236.1_4403709_4404516_-	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|415aa|down_3|NZ_CP041236.1_4404516_4405761_-	COG0446, HcaD, Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]	csa3|112aa|down_4|NZ_CP041236.1_4405812_4406148_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|288aa|down_5|NZ_CP041236.1_4406242_4407106_+	cd07724, POD-like_MBL-fold, ETHE1 (PDO type I), persulfide dioxygenase A (PDOA, PDO type II) and related proteins; MBL-fold metallo-hydrolase domain	NA|542aa|down_6|NZ_CP041236.1_4407164_4408790_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|161aa|down_7|NZ_CP041236.1_4408966_4409449_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|412aa|down_8|NZ_CP041236.1_4409644_4410880_+	COG1071, AcoA, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	NA|353aa|down_9|NZ_CP041236.1_4410881_4411940_+	COG0022, AcoB, Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]
GCF_006547025.1_ASM654702v1	NZ_CP041236	Pseudomonas azotoformans strain P45A chromosome, complete genome	4	5782090-5782200	3	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL,RT	Orphan	GGGGTGCGCTCTAACCAACTGAGCTACA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL,RT	NA,NA|110aa|down_0|NZ_CP041236.1_5784404_5784734_+,NA|189aa|down_3|NZ_CP041236.1_5786092_5786659_-,NA|200aa|down_9|NZ_CP041236.1_5790994_5791594_+	NA|164aa|up_9|NZ_CP041236.1_5768503_5768995_-	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|261aa|up_8|NZ_CP041236.1_5769297_5770080_-	TIGR01172, Serine_acetyltransferase, serine O-acetyltransferase	NA|257aa|up_7|NZ_CP041236.1_5770082_5770853_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|272aa|up_6|NZ_CP041236.1_5770998_5771814_+	cd01639, IMPase, IMPase, inositol monophosphatase and related domains	NA|181aa|up_5|NZ_CP041236.1_5771922_5772465_-	PRK11280, PRK11280, hypothetical protein; Provisional	NA|305aa|up_4|NZ_CP041236.1_5772589_5773504_-	PRK13022, secF, protein translocase subunit SecF	NA|623aa|up_3|NZ_CP041236.1_5773513_5775382_-	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|113aa|up_2|NZ_CP041236.1_5775444_5775783_-	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|375aa|up_1|NZ_CP041236.1_5775826_5776951_-	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|350aa|up_0|NZ_CP041236.1_5776947_5777997_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|110aa|down_0|NZ_CP041236.1_5784404_5784734_+	NA	NA|124aa|down_1|NZ_CP041236.1_5784758_5785130_+	pfam08000, bPH_1, Bacterial PH domain	NA|86aa|down_2|NZ_CP041236.1_5785606_5785864_+	pfam03513, Cloacin_immun, Cloacin immunity protein	NA|189aa|down_3|NZ_CP041236.1_5786092_5786659_-	NA	NA|451aa|down_4|NZ_CP041236.1_5786733_5788086_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|221aa|down_5|NZ_CP041236.1_5788082_5788745_-	PRK10643, PRK10643, two-component system response regulator PmrA	NA|89aa|down_6|NZ_CP041236.1_5788892_5789159_+	pfam13670, PepSY_2, Peptidase propeptide and YPEB domain	NA|182aa|down_7|NZ_CP041236.1_5789158_5789704_+	COG3658, COG3658, Cytochrome b [Energy production and conversion]	NA|423aa|down_8|NZ_CP041236.1_5789726_5790995_+	pfam13088, BNR_2, BNR repeat-like domain	NA|200aa|down_9|NZ_CP041236.1_5790994_5791594_+	NA
GCF_006547025.1_ASM654702v1	NZ_CP041236	Pseudomonas azotoformans strain P45A chromosome, complete genome	5	6237734-6237844	4	CRISPRCasFinder	no		DEDDh,DinG,csa3,cas3,WYL,RT	Orphan	GGGGTGCGCTCTAACCAACTGAGCTACA	28	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,csa3,cas3,WYL,RT	NA|149aa|up_2|NZ_CP041236.1_6231855_6232302_-,NA|124aa|down_0|NZ_CP041236.1_6239522_6239894_+,NA|25aa|down_2|NZ_CP041236.1_6241353_6241428_+	NA|1358aa|up_9|NZ_CP041236.1_6223556_6227630_-	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed	NA|122aa|up_8|NZ_CP041236.1_6227849_6228215_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|167aa|up_7|NZ_CP041236.1_6228293_6228794_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|232aa|up_6|NZ_CP041236.1_6228993_6229689_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|144aa|up_5|NZ_CP041236.1_6229688_6230120_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|178aa|up_4|NZ_CP041236.1_6230237_6230771_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|123aa|up_3|NZ_CP041236.1_6230780_6231149_-	PRK05740, secE, preprotein translocase subunit SecE; Reviewed	NA|149aa|up_2|NZ_CP041236.1_6231855_6232302_-	NA	NA|250aa|up_1|NZ_CP041236.1_6232309_6233059_-	PRK13322, PRK13322, pantothenate kinase; Reviewed	NA|320aa|up_0|NZ_CP041236.1_6233048_6234008_-	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|124aa|down_0|NZ_CP041236.1_6239522_6239894_+	NA	NA|400aa|down_1|NZ_CP041236.1_6240016_6241216_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|25aa|down_2|NZ_CP041236.1_6241353_6241428_+	NA	NA|473aa|down_3|NZ_CP041236.1_6241424_6242843_+	PRK11649, PRK11649, putative peptidase; Provisional	NA|364aa|down_4|NZ_CP041236.1_6242846_6243938_+	PRK09585, anmK, anhydro-N-acetylmuramic acid kinase; Reviewed	NA|117aa|down_5|NZ_CP041236.1_6244029_6244380_-	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional	NA|345aa|down_6|NZ_CP041236.1_6244545_6245580_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|143aa|down_7|NZ_CP041236.1_6245715_6246144_+	pfam03653, UPF0093, Uncharacterized protein family (UPF0093)	NA|321aa|down_8|NZ_CP041236.1_6246167_6247130_+	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only]	NA|321aa|down_9|NZ_CP041236.1_6247199_6248162_+	pfam05656, DUF805, Protein of unknown function (DUF805)
