The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP041202	Vibrio parahaemolyticus strain Vb0624 chromosome 1, complete sequence	3556649	747186	753888	3556649		Staphylococcus_phage(50.0%)	7	NA	NA
WP_005483011.1|747186_748326_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	41.7	1.3e-62
WP_141179879.1|748343_749594_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.7	2.3e-97
WP_005482986.1|749721_750171_+	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_141179880.1|750178_751303_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	36.0	5.2e-48
WP_005483039.1|751315_751969_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	37.5	1.6e-33
WP_025521214.1|752138_753248_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.6	1.5e-63
WP_005440184.1|753417_753888_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	49.3	1.7e-32
>prophage 2
NZ_CP041202	Vibrio parahaemolyticus strain Vb0624 chromosome 1, complete sequence	3556649	1032929	1057964	3556649		Vibrio_phage(46.15%)	39	NA	NA
WP_141179923.1|1032929_1033838_-	hypothetical protein	NA	G8CLB2	Synechococcus_phage	34.1	1.8e-35
WP_065297113.1|1033827_1034274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179924.1|1034273_1034705_-	DUF1320 family protein	NA	A0A0M3VI88	Ralstonia_phage	40.9	2.6e-19
WP_141179925.1|1035349_1036243_-	hypothetical protein	NA	L7P7Y9	Pseudomonas_phage	49.3	9.2e-72
WP_141179926.1|1036289_1036682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179927.1|1036682_1037840_-	hypothetical protein	NA	A0A0C4UQU6	Shigella_phage	44.7	1.2e-71
WP_141179928.1|1037887_1038601_-	hypothetical protein	NA	A0A1L5C2A8	Pseudoalteromonas_phage	32.7	1.4e-17
WP_141179929.1|1038769_1038958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179930.1|1039203_1039662_-	phage virion morphogenesis protein	NA	Q5ZQY1	Pseudomonas_phage	39.1	2.7e-19
WP_141179931.1|1039661_1039859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179932.1|1039868_1041272_-	F protein	NA	A0A2H4IYU7	uncultured_Caudovirales_phage	47.9	5.9e-65
WP_141179933.1|1041386_1042961_-	DUF935 family protein	NA	C9DGN6	Escherichia_phage	48.8	5.5e-128
WP_141179934.1|1042981_1044532_-	hypothetical protein	NA	M1NVQ0	Vibrio_phage	64.4	7.0e-184
WP_141179935.1|1044531_1045113_-	DUF3486 family protein	NA	A0A2I7S9D1	Vibrio_phage	43.4	2.1e-32
WP_065297126.1|1045270_1045561_-	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	54.3	1.4e-21
WP_081280737.1|1045547_1045874_-	DUF2730 family protein	NA	A0A2I7S9E2	Vibrio_phage	37.2	1.4e-09
WP_141179936.1|1045870_1046089_-	TraR/DksA family transcriptional regulator	NA	NA	NA	NA	NA
WP_141179937.1|1046085_1046592_-	hypothetical protein	NA	A0A2I7S9B5	Vibrio_phage	44.2	1.8e-24
WP_141179938.1|1046847_1047294_-	hypothetical protein	NA	M4M9N1	Vibrio_phage	60.0	5.7e-46
WP_141179939.1|1047439_1047841_-	transcriptional regulator	NA	A0A0C4UR27	Shigella_phage	40.2	1.1e-19
WP_141179940.1|1047988_1048285_+	hypothetical protein	NA	NA	NA	NA	NA
WP_141179941.1|1048321_1048636_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179942.1|1048651_1048918_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179943.1|1048926_1049466_-	hypothetical protein	NA	A0A2P9JZH6	Alteromonadaceae_phage	45.8	2.4e-27
WP_141179944.1|1049476_1049797_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179945.1|1049793_1050372_-	DUF1018 domain-containing protein	NA	A0A0C4UQU3	Shigella_phage	38.0	7.6e-27
WP_141179946.1|1050568_1051015_-	hypothetical protein	NA	M4MHH2	Vibrio_phage	54.0	2.9e-34
WP_141179947.1|1051014_1051290_-	hypothetical protein	NA	R9TR78	Vibrio_phage	54.9	3.1e-26
WP_115206381.1|1051359_1051554_-	hypothetical protein	NA	A0A2I7S9A9	Vibrio_phage	39.0	1.9e-06
WP_122069545.1|1051550_1051751_-	ANR family transcriptional regulator	NA	NA	NA	NA	NA
WP_122069547.1|1051762_1052386_-	DUF3164 family protein	NA	A0A2H4IYN0	uncultured_Caudovirales_phage	43.3	5.9e-41
WP_122069549.1|1052373_1052571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179948.1|1052555_1052828_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179949.1|1052889_1053243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141179950.1|1053229_1054180_-	AAA family ATPase	NA	M4M9P4	Vibrio_phage	49.7	7.5e-80
WP_141179951.1|1054197_1056189_-	DDE endonuclease	NA	M4M9R2	Vibrio_phage	53.7	4.4e-199
WP_141179952.1|1056185_1056668_-	hypothetical protein	NA	Q6QID6	Burkholderia_phage	49.7	7.0e-42
WP_141179953.1|1056791_1057043_-	transcriptional regulator	NA	A0A0C4UQU0	Shigella_phage	66.7	1.3e-20
WP_141180535.1|1057244_1057964_+	helix-turn-helix transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	70.0	4.0e-57
>prophage 3
NZ_CP041202	Vibrio parahaemolyticus strain Vb0624 chromosome 1, complete sequence	3556649	2868755	2885939	3556649	tRNA	Klosneuvirus(20.0%)	14	NA	NA
WP_005455546.1|2868755_2871338_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	37.9	1.0e-78
WP_141180414.1|2871480_2871948_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_005478550.1|2872071_2873115_-	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	60.7	8.1e-112
WP_017449151.1|2873315_2873798_-	nicotinamide-nucleotide amidase	NA	B5TK85	Pseudomonas_phage	48.7	1.7e-27
WP_141180415.1|2873882_2876444_+	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	24.8	2.9e-33
WP_005455560.1|2877593_2878517_-	peptidoglycan DD-metalloendopeptidase family protein	NA	D7RWE0	Brochothrix_phage	35.2	4.1e-06
WP_005455562.1|2878531_2879158_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	1.3e-35
WP_140166594.1|2879157_2879934_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.4	8.6e-66
WP_140166593.1|2879933_2880977_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_005380896.1|2881023_2881500_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_047734140.1|2881517_2882222_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	A0A2H4UTB4	Bodo_saltans_virus	22.2	1.0e-04
WP_005455577.1|2882223_2882505_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_005455579.1|2882918_2884220_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.2	4.2e-134
WP_141180416.1|2884298_2885939_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.4	7.2e-155
>prophage 4
NZ_CP041202	Vibrio parahaemolyticus strain Vb0624 chromosome 1, complete sequence	3556649	3025006	3086397	3556649	tRNA,transposase,protease	Salmonella_phage(50.0%)	45	NA	NA
WP_023624214.1|3025006_3026350_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_005457057.1|3026460_3026988_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_141180443.1|3027060_3028023_-	D-2-hydroxyacid dehydrogenase	NA	M1HMI7	Paramecium_bursaria_Chlorella_virus	29.9	3.3e-27
WP_140281998.1|3028057_3028810_-|tRNA	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	tRNA	NA	NA	NA	NA
WP_005478846.1|3028856_3028973_-	hypothetical protein	NA	NA	NA	NA	NA
WP_141180444.1|3029137_3030403_+	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_141180445.1|3030472_3033382_-	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	36.1	2.9e-21
WP_005461836.1|3033939_3035316_+	PhoH family protein	NA	A0A2I7SAD7	Vibrio_phage	44.4	1.3e-104
WP_020835343.1|3035386_3036832_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_025533072.1|3036843_3037665_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_141180446.1|3037699_3041578_-	TIGR02099 family protein	NA	NA	NA	NA	NA
WP_005461826.1|3041589_3043059_-	ribonuclease G	NA	NA	NA	NA	NA
WP_141180447.1|3043077_3043647_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_005461823.1|3043651_3044140_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_005461822.1|3044129_3045026_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_005381144.1|3045163_3046207_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	20.3	2.7e-06
WP_141180448.1|3046358_3050930_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025579232.1|3050934_3051357_-	MSHA biogenesis protein MshP	NA	NA	NA	NA	NA
WP_140289726.1|3051346_3052135_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_025579235.1|3052134_3052695_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_025579237.1|3052691_3053159_-	type II secretion system protein	NA	NA	NA	NA	NA
WP_141180572.1|3053274_3053508_-	MSHA biogenesis protein MshA	NA	NA	NA	NA	NA
WP_005497282.1|3053569_3054031_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_025592230.1|3054325_3054787_-	MSHA biogenesis protein MshF	NA	NA	NA	NA	NA
WP_021484749.1|3054790_3056014_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_020835334.1|3056022_3057747_-	type II/IV secretion system protein	NA	NA	NA	NA	NA
WP_031791808.1|3057743_3058832_-	MSHA biogenesis protein MshN	NA	NA	NA	NA	NA
WP_005456312.1|3058816_3059662_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_005456314.1|3059705_3061349_-	pilus (MSHA type) biogenesis protein MshL	NA	NA	NA	NA	NA
WP_005481006.1|3061369_3061699_-	MSHA biogenesis protein MshK	NA	NA	NA	NA	NA
WP_005497276.1|3061691_3062342_-	MSHA biogenesis protein MshJ	NA	NA	NA	NA	NA
WP_025611168.1|3062338_3063784_-	MSHA biogenesis protein MshI	NA	NA	NA	NA	NA
WP_011106082.1|3063795_3065805_-	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
WP_141179716.1|3066005_3067199_-|transposase	ISL3 family transposase	transposase	A9YX10	Burkholderia_phage	48.7	1.1e-101
WP_141180449.1|3067606_3068569_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_141180450.1|3068612_3071768_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_141180451.1|3071838_3072423_-	DUF2971 domain-containing protein	NA	NA	NA	NA	NA
WP_141180573.1|3072419_3073763_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_141180452.1|3073777_3075751_-	N-6 DNA methylase	NA	A0A220A2U5	Liberibacter_phage	24.9	6.6e-30
WP_001138014.1|3076176_3079143_-|transposase	Tn3-like element TnAs1 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	100.0	0.0e+00
WP_001161490.1|3079146_3079707_-	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	100.0	1.1e-59
WP_013362812.1|3081774_3082743_-|transposase	IS5-like element IS903B family transposase	transposase	A0A1B0VFY5	Salmonella_phage	100.0	1.6e-186
WP_001617865.1|3082777_3083653_-	class A extended-spectrum beta-lactamase CTX-M-14	NA	A0A1B0VBP7	Salmonella_phage	99.6	6.1e-153
WP_000608644.1|3083902_3085165_-|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
WP_014342102.1|3085365_3086397_+	methyl-accepting chemotaxis protein	NA	A0A1B0VAH3	Salmonella_phage	100.0	1.2e-51
