assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006496635.1_ASM649663v1	NZ_CP022958	Azoarcus sp. DD4 chromosome, complete genome	1	465096-468555	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	DEDDh,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas9_archaeal,DinG,PD-DExK	Type I-C, Type I-U?,Type I-U	GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC,GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC,GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC	32,32,32	0	0	NA	NA	I-C:I-C:I-C	50,51,51	51	TypeI-C,TypeI-U,TypeI-U?	DEDDh,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas9_archaeal,DinG,PD-DExK	NA|68aa|up_9|NZ_CP022958.1_455609_455813_+,NA|111aa|up_8|NZ_CP022958.1_455883_456216_+,NA|51aa|up_7|NZ_CP022958.1_456490_456643_+,NA	NA|68aa|up_9|NZ_CP022958.1_455609_455813_+	NA	NA|111aa|up_8|NZ_CP022958.1_455883_456216_+	NA	NA|51aa|up_7|NZ_CP022958.1_456490_456643_+	NA	cas3|758aa|up_6|NZ_CP022958.1_456801_459075_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_5|NZ_CP022958.1_459543_460218_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|608aa|up_4|NZ_CP022958.1_460214_462038_+	pfam09709, Cas_Csd1, CRISPR-associated protein (Cas_Csd1)	cas7|294aa|up_3|NZ_CP022958.1_462037_462919_+	TIGR02589, conserved_hypothetical_protein, CRISPR-associated protein Cas7/Csd2, subtype I-C/DVULG	cas4|210aa|up_2|NZ_CP022958.1_462938_463568_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|347aa|up_1|NZ_CP022958.1_463571_464612_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP022958.1_464621_464912_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|330aa|down_0|NZ_CP022958.1_468677_469667_-	PRK13537, PRK13537, nodulation factor ABC transporter ATP-binding protein NodI	NA|204aa|down_1|NZ_CP022958.1_469666_470278_-	PRK10357, PRK10357, putative glutathione S-transferase; Provisional	NA|224aa|down_2|NZ_CP022958.1_470345_471017_-	COG2945, COG2945, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|107aa|down_3|NZ_CP022958.1_471024_471345_-	COG3411, COG3411, Ferredoxin [Energy production and conversion]	NA|362aa|down_4|NZ_CP022958.1_471368_472454_-	pfam04892, VanZ, VanZ like family	NA|328aa|down_5|NZ_CP022958.1_472706_473690_-	pfam14525, AraC_binding_2, AraC-binding-like domain	NA|422aa|down_6|NZ_CP022958.1_473937_475203_+	cd08880, RHO_alpha_C_ahdA1c-like, C-terminal catalytic domain of the large/alpha subunit (ahdA1c) of a ring-hydroxylating dioxygenase from Sphingomonas sp	NA|158aa|down_7|NZ_CP022958.1_475217_475691_+	cd00667, ring_hydroxylating_dioxygenases_beta, Ring hydroxylating dioxygenase beta subunit	NA|108aa|down_8|NZ_CP022958.1_475701_476025_+	cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO)	NA|388aa|down_9|NZ_CP022958.1_476205_477369_+	cd06359, PBP1_Nba-like, type 1 periplasmic binding component of active transport systems predicted to be involved in 2-nitrobenzoic acid degradation pathway
GCF_006496635.1_ASM649663v1	NZ_CP022958	Azoarcus sp. DD4 chromosome, complete genome	2	1072823-1072919	2	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas9_archaeal,DinG,PD-DExK	Orphan	CCGCCATCGGCGCGGTGGCCGGTGC	25	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas9_archaeal,DinG,PD-DExK	NA|72aa|up_7|NZ_CP022958.1_1064302_1064518_-,NA|175aa|down_6|NZ_CP022958.1_1084408_1084933_+	NA|234aa|up_9|NZ_CP022958.1_1063077_1063779_+	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis]	NA|79aa|up_8|NZ_CP022958.1_1063888_1064125_-	pfam06060, Mesothelin, Pre-pro-megakaryocyte potentiating factor precursor (Mesothelin)	NA|72aa|up_7|NZ_CP022958.1_1064302_1064518_-	NA	NA|400aa|up_6|NZ_CP022958.1_1064560_1065760_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|403aa|up_5|NZ_CP022958.1_1065774_1066983_-	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|238aa|up_4|NZ_CP022958.1_1066979_1067693_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|382aa|up_3|NZ_CP022958.1_1067707_1068853_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|578aa|up_2|NZ_CP022958.1_1068979_1070713_-	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional	NA|425aa|up_1|NZ_CP022958.1_1070880_1072155_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|128aa|up_0|NZ_CP022958.1_1072210_1072594_+	PRK14196, PRK14196, fluoride efflux transporter CrcB	NA|1099aa|down_0|NZ_CP022958.1_1073451_1076748_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	NA|367aa|down_1|NZ_CP022958.1_1076976_1078077_+	COG3355, COG3355, Predicted transcriptional regulator [Transcription]	NA|639aa|down_2|NZ_CP022958.1_1078165_1080082_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|289aa|down_3|NZ_CP022958.1_1080161_1081028_-	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|520aa|down_4|NZ_CP022958.1_1081250_1082810_+	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	NA|468aa|down_5|NZ_CP022958.1_1082837_1084241_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|175aa|down_6|NZ_CP022958.1_1084408_1084933_+	NA	NA|235aa|down_7|NZ_CP022958.1_1085023_1085728_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|365aa|down_8|NZ_CP022958.1_1085724_1086819_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|1060aa|down_9|NZ_CP022958.1_1086815_1089995_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]
GCF_006496635.1_ASM649663v1	NZ_CP022958	Azoarcus sp. DD4 chromosome, complete genome	3	5179013-5179117	3	CRISPRCasFinder	no		DEDDh,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas9_archaeal,DinG,PD-DExK	Orphan	GACAGCCCCCACGCTCACTGCGTTCGC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,Cas9_archaeal,DinG,PD-DExK	NA|100aa|up_0|NZ_CP022958.1_5177595_5177895_-,NA	NA|192aa|up_9|NZ_CP022958.1_5168283_5168859_+	pfam11939, NiFe-hyd_HybE, [NiFe]-hydrogenase assembly, chaperone, HybE	NA|376aa|up_8|NZ_CP022958.1_5168858_5169986_+	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit	NA|120aa|up_7|NZ_CP022958.1_5169978_5170338_+	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA	NA|311aa|up_6|NZ_CP022958.1_5170355_5171288_+	PRK10463, PRK10463, hydrogenase nickel incorporation protein HypB; Provisional	NA|792aa|up_5|NZ_CP022958.1_5171284_5173660_+	COG0068, HypF, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|80aa|up_4|NZ_CP022958.1_5173664_5173904_+	pfam01455, HupF_HypC, HupF/HypC family	NA|381aa|up_3|NZ_CP022958.1_5173900_5175043_+	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional	NA|351aa|up_2|NZ_CP022958.1_5175062_5176115_+	cd02197, HypE, HypE (Hydrogenase expression/formation protein)	NA|486aa|up_1|NZ_CP022958.1_5176128_5177586_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|100aa|up_0|NZ_CP022958.1_5177595_5177895_-	NA	NA|483aa|down_0|NZ_CP022958.1_5179690_5181139_+	NF033181, NiFeSe_hydrog, nickel-dependent hydrogenase large subunit	NA|515aa|down_1|NZ_CP022958.1_5181244_5182789_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|463aa|down_2|NZ_CP022958.1_5182820_5184209_+	COG4191, COG4191, Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]	NA|165aa|down_3|NZ_CP022958.1_5184190_5184685_-	smart00903, Flavin_Reduct, Flavin reductase like domain	NA|367aa|down_4|NZ_CP022958.1_5184805_5185906_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|200aa|down_5|NZ_CP022958.1_5185923_5186523_-	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only]	NA|210aa|down_6|NZ_CP022958.1_5186569_5187199_-	PRK05920, PRK05920, aromatic acid decarboxylase; Validated	NA|184aa|down_7|NZ_CP022958.1_5187436_5187988_+	pfam09361, Phasin_2, Phasin protein	NA|346aa|down_8|NZ_CP022958.1_5188084_5189122_-	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription]	NA|318aa|down_9|NZ_CP022958.1_5189284_5190238_+	COG2040, MHT1, Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) [Amino acid transport and metabolism]
