assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006364695.1_ASM636469v1	NZ_CP041002	Escherichia coli strain FDAARGOS_772 chromosome, complete genome	1	508604-508700	1	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	GCTTGACGCGTCTTATCAGGCCTACAA	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|454aa|up_9|NZ_CP041002.1_496483_497845_+	PRK08044, PRK08044, allantoinase AllB	NA|434aa|up_8|NZ_CP041002.1_497901_499203_+	PRK11412, PRK11412, uracil/xanthine transporter	NA|382aa|up_7|NZ_CP041002.1_499224_500370_+	PRK09932, PRK09932, glycerate 3-kinase	NA|262aa|up_6|NZ_CP041002.1_500498_501284_-	COG3257, GlxB, Uncharacterized protein, possibly involved in glyoxylate utilization [General function prediction only]	NA|412aa|up_5|NZ_CP041002.1_501294_502530_-	TIGR03176, AllC, allantoate amidohydrolase	NA|350aa|up_4|NZ_CP041002.1_502551_503601_-	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional	NA|556aa|up_3|NZ_CP041002.1_503917_505585_+	PRK06091, PRK06091, membrane protein FdrA; Validated	NA|420aa|up_2|NZ_CP041002.1_505594_506854_+	pfam06545, DUF1116, Protein of unknown function (DUF1116)	NA|272aa|up_1|NZ_CP041002.1_506864_507680_+	pfam11392, DUF2877, Protein of unknown function (DUF2877)	NA|298aa|up_0|NZ_CP041002.1_507676_508570_+	PRK09411, PRK09411, carbamate kinase; Reviewed	NA|356aa|down_0|NZ_CP041002.1_508764_509832_-	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed	NA|170aa|down_1|NZ_CP041002.1_509828_510338_-	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism]	NA|241aa|down_2|NZ_CP041002.1_510455_511178_-	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional	NA|165aa|down_3|NZ_CP041002.1_511180_511675_-	PRK10791, PRK10791, peptidylprolyl isomerase B	NA|462aa|down_4|NZ_CP041002.1_511848_513234_+	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|174aa|down_5|NZ_CP041002.1_513269_513791_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|71aa|down_6|NZ_CP041002.1_513898_514111_-	PRK11507, PRK11507, ribosome-associated protein YbcJ	NA|289aa|down_7|NZ_CP041002.1_514112_514979_-	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	NA|181aa|down_8|NZ_CP041002.1_515459_516002_+	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA	NA|231aa|down_9|NZ_CP041002.1_516221_516914_+	PRK15195, PRK15195, molecular chaperone FimC
GCF_006364695.1_ASM636469v1	NZ_CP041002	Escherichia coli strain FDAARGOS_772 chromosome, complete genome	2	1888141-1888271	2	CRISPRCasFinder	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	CCGGGTTAACCCAATCGGCTTCAGGCTGCTGCGGTTGGTGT	41	0	0	NA	NA	NA	1	1	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA|60aa|up_7|NZ_CP041002.1_1883400_1883580_-,NA|35aa|up_5|NZ_CP041002.1_1884190_1884295_-,NA|361aa|up_0|NZ_CP041002.1_1887005_1888088_-,NA|181aa|down_3|NZ_CP041002.1_1889837_1890380_+,NA|128aa|down_5|NZ_CP041002.1_1891638_1892022_+,NA|238aa|down_6|NZ_CP041002.1_1892025_1892739_+,NA|120aa|down_7|NZ_CP041002.1_1892770_1893130_+,NA|70aa|down_8|NZ_CP041002.1_1893098_1893308_-	NA|106aa|up_9|NZ_CP041002.1_1882528_1882846_+	COG2944, COG2944, Predicted transcriptional regulator [Transcription]	NA|162aa|up_8|NZ_CP041002.1_1882896_1883382_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|60aa|up_7|NZ_CP041002.1_1883400_1883580_-	NA	NA|71aa|up_6|NZ_CP041002.1_1883789_1884002_-	pfam01848, HOK_GEF, Hok/gef family	NA|35aa|up_5|NZ_CP041002.1_1884190_1884295_-	NA	NA|195aa|up_4|NZ_CP041002.1_1884410_1884995_-	pfam04448, DUF551, Protein of unknown function (DUF551)	NA|132aa|up_3|NZ_CP041002.1_1885051_1885447_-	pfam06163, DUF977, Bacterial protein of unknown function (DUF977)	NA|257aa|up_2|NZ_CP041002.1_1885462_1886233_-	pfam07789, DUF1627, Protein of unknown function (DUF1627)	NA|247aa|up_1|NZ_CP041002.1_1886258_1886999_-	PRK12377, PRK12377, putative replication protein; Provisional	NA|361aa|up_0|NZ_CP041002.1_1887005_1888088_-	NA	NA|99aa|down_0|NZ_CP041002.1_1888341_1888638_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|67aa|down_1|NZ_CP041002.1_1888776_1888977_-	pfam09048, Cro, Cro	NA|238aa|down_2|NZ_CP041002.1_1889077_1889791_+	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|181aa|down_3|NZ_CP041002.1_1889837_1890380_+	NA	NA|259aa|down_4|NZ_CP041002.1_1890367_1891144_+	pfam08861, DUF1828, Domain of unknown function DUF1828	NA|128aa|down_5|NZ_CP041002.1_1891638_1892022_+	NA	NA|238aa|down_6|NZ_CP041002.1_1892025_1892739_+	NA	NA|120aa|down_7|NZ_CP041002.1_1892770_1893130_+	NA	NA|70aa|down_8|NZ_CP041002.1_1893098_1893308_-	NA	NA|74aa|down_9|NZ_CP041002.1_1893764_1893986_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed
GCF_006364695.1_ASM636469v1	NZ_CP041002	Escherichia coli strain FDAARGOS_772 chromosome, complete genome	3	3240960-3241049	3	CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC	29	0	0	NA	NA	I-E	1	1	TypeI-E	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA	NA|254aa|up_9|NZ_CP041002.1_3232772_3233534_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP041002.1_3233514_3234564_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP041002.1_3234560_3235040_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP041002.1_3235039_3235750_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP041002.1_3235768_3236080_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP041002.1_3236273_3236597_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP041002.1_3236646_3237252_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP041002.1_3237251_3238679_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP041002.1_3238680_3239589_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP041002.1_3239840_3240878_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP041002.1_3241145_3241439_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|307aa|down_1|NZ_CP041002.1_3241438_3242359_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP041002.1_3242355_3243006_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP041002.1_3242987_3243734_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP041002.1_3243744_3244800_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|179aa|down_5|NZ_CP041002.1_3244811_3245348_-	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2	cas8e|521aa|down_6|NZ_CP041002.1_3245344_3246907_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|900aa|down_7|NZ_CP041002.1_3247004_3249704_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|371aa|down_8|NZ_CP041002.1_3250057_3251170_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|51aa|down_9|NZ_CP041002.1_3251246_3251399_-	pfam01848, HOK_GEF, Hok/gef family
GCF_006364695.1_ASM636469v1	NZ_CP041002	Escherichia coli strain FDAARGOS_772 chromosome, complete genome	4	3268098-3268919	4,1,1	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	Orphan	CGGTTTATCCCCGCTGGCGCGGGGAACTC,CGGTTTATCCCCGCTGGCGCGGGGAACTC,GGTTTATCCCCGCTGGCGCGGGGAACTC	29,29,28	0	0	NA	NA	I-E:I-E:I-E	13,13,13	13	Orphan	DEDDh,DinG,PrimPol,cas3,c2c9_V-U4,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,RT	NA,NA|47aa|down_1|NZ_CP041002.1_3270068_3270209_+	NA|424aa|up_9|NZ_CP041002.1_3256741_3258013_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP041002.1_3258003_3258264_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP041002.1_3258280_3258856_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP041002.1_3259003_3259864_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP041002.1_3259860_3260640_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP041002.1_3260617_3261955_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP041002.1_3262048_3263503_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP041002.1_3263572_3264358_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP041002.1_3264676_3265954_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP041002.1_3265980_3267459_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP041002.1_3269258_3269930_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|47aa|down_1|NZ_CP041002.1_3270068_3270209_+	NA	NA|433aa|down_2|NZ_CP041002.1_3271154_3272453_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_3|NZ_CP041002.1_3272540_3274178_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_4|NZ_CP041002.1_3274405_3275197_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|112aa|down_5|NZ_CP041002.1_3275267_3275603_-	PRK09907, PRK09907, endoribonuclease MazF	NA|83aa|down_6|NZ_CP041002.1_3275602_3275851_-	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE	NA|745aa|down_7|NZ_CP041002.1_3275928_3278163_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_CP041002.1_3278210_3279512_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_CP041002.1_3279568_3282325_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
