The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP038030	Rhodococcus ruber strain R1 chromosome, complete genome	5352622	2563875	2572060	5352622		Mycobacterium_phage(33.33%)	9	NA	NA
WP_010595079.1|2563875_2564673_+	Fe-S cluster assembly ATPase SufC	NA	W8CYL7	Bacillus_phage	27.7	3.2e-07
WP_010595078.1|2564687_2565941_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	45.4	4.3e-99
WP_010595077.1|2565940_2566429_+	SUF system NifU family Fe-S cluster assembly protein	NA	A0A0K1LSF9	Mycobacterium_phage	44.4	2.4e-21
WP_010595076.1|2566428_2566809_+	metal-sulfur cluster assembly factor	NA	NA	NA	NA	NA
WP_048773575.1|2566925_2567318_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010595074.1|2567362_2568337_-	Ku protein	NA	A0A249XRB2	Mycobacterium_phage	43.2	2.3e-52
WP_017682208.1|2568389_2569514_-	lycopene cyclase family protein	NA	NA	NA	NA	NA
WP_026138110.1|2569517_2570306_-	SDR family oxidoreductase	NA	A0A0M4JSW6	Mollivirus	33.9	2.8e-08
WP_017682210.1|2570431_2572060_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	27.5	3.2e-38
>prophage 1
NZ_CP038031	Rhodococcus ruber strain R1 plasmid unnamed1, complete sequence	179109	8161	74024	179109	protease,transposase	Mycobacterium_phage(36.36%)	50	NA	NA
WP_140189277.1|8161_9380_+|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	34.8	9.4e-43
WP_140189227.1|10437_11679_+|transposase	IS110 family transposase	transposase	Q9JMN8	Wolbachia_phage	30.4	8.7e-44
WP_140189228.1|11822_12344_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189229.1|12483_12792_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189230.1|13779_13962_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140189231.1|14438_14861_-	low affinity iron permease family protein	NA	A0A1C9EHA1	Mycobacterium_phage	58.7	1.8e-30
WP_140189232.1|15352_15781_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_140189233.1|15876_16296_-	anti-sigma factor antagonist	NA	NA	NA	NA	NA
WP_140189278.1|17066_17450_+	response regulator	NA	NA	NA	NA	NA
WP_140189234.1|18787_19267_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189235.1|19341_20379_-	alpha/beta fold hydrolase	NA	R4JP33	Mycobacterium_phage	31.4	9.2e-23
WP_161572357.1|20707_21031_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140189236.1|21603_23271_-	penicillin-binding protein	NA	NA	NA	NA	NA
WP_140189279.1|24066_25413_+|transposase	IS1380 family transposase	transposase	A0A222ZN33	Mycobacterium_phage	65.6	2.8e-165
WP_140189280.1|26429_27032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140189238.1|26957_28176_+|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	35.1	1.1e-43
WP_161572358.1|28206_28590_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_140189281.1|29021_29588_-	ANTAR domain-containing protein	NA	NA	NA	NA	NA
WP_140189240.1|30035_30317_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140189238.1|30476_31696_-|transposase	IS3 family transposase	transposase	A0A160DCU2	Gordonia_phage	35.1	1.1e-43
WP_140189241.1|32891_33686_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	35.6	4.0e-34
WP_140189242.1|33682_35176_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
WP_140189243.1|35412_35673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189244.1|36261_37026_+	VOC family protein	NA	NA	NA	NA	NA
WP_140189282.1|38802_40179_+	wax ester/triacylglycerol synthase family O-acyltransferase	NA	NA	NA	NA	NA
WP_161572359.1|40395_40794_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161572360.1|41023_41476_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161572361.1|41524_41698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189247.1|41694_42918_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_140189248.1|43318_43528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_161572362.1|44669_45008_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189250.1|46772_47012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_140189251.1|47548_47965_+	Hsp20 family protein	NA	NA	NA	NA	NA
WP_140189253.1|48766_49129_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_140189283.1|49128_53232_-	SpoIIE family protein phosphatase	NA	A0A1V0SGX0	Hokovirus	26.8	8.1e-22
WP_140189254.1|53638_54361_-	ANTAR domain-containing protein	NA	NA	NA	NA	NA
WP_140189255.1|55306_55549_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189256.1|56003_56474_-	hypothetical protein	NA	NA	NA	NA	NA
WP_161572363.1|57964_58126_+	hypothetical protein	NA	NA	NA	NA	NA
WP_140189258.1|59162_60428_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	36.3	1.0e-31
WP_140189259.1|60589_61762_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_140189260.1|61758_62394_+	response regulator	NA	NA	NA	NA	NA
WP_140189284.1|62562_63027_+	DUF2871 family protein	NA	NA	NA	NA	NA
WP_140189261.1|63023_63413_+	DUF3817 domain-containing protein	NA	NA	NA	NA	NA
WP_140189262.1|63444_65595_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_029542787.1|66252_67083_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_161572371.1|67348_68641_-|transposase	IS256 family transposase	transposase	A0A2P1JQX9	Mycobacterium_phage	82.7	1.4e-201
WP_140189264.1|69286_70222_-	TniQ family protein	NA	NA	NA	NA	NA
WP_140189265.1|70190_71255_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_140189285.1|73301_74024_-|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
