assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006338285.1_ASM633828v1	NZ_CP032910	Helicobacter pylori strain 20-A-EK1 chromosome, complete genome	1	408432-408528	1	CRISPRCasFinder	no		csx1,cas2,cas14j,cas4,cas3,DEDDh	Orphan	AAACGCAAGCGATAACTAACATTAACGAAGC	31	0	0	NA	NA	NA	1	1	Orphan	csx1,cas2,cas14j,cas4,cas3,DEDDh	NA|69aa|up_8|NZ_CP032910.1_397400_397607_+,NA|145aa|up_5|NZ_CP032910.1_399104_399539_+,NA|66aa|up_0|NZ_CP032910.1_408057_408255_+,NA|436aa|down_8|NZ_CP032910.1_417092_418400_-	NA|186aa|up_9|NZ_CP032910.1_396810_397368_+	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|69aa|up_8|NZ_CP032910.1_397400_397607_+	NA	NA|77aa|up_7|NZ_CP032910.1_397643_397874_+	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|313aa|up_6|NZ_CP032910.1_398035_398974_+	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|145aa|up_5|NZ_CP032910.1_399104_399539_+	NA	NA|607aa|up_4|NZ_CP032910.1_399540_401361_+	PRK08471, flgK, flagellar hook-associated protein FlgK; Validated	NA|568aa|up_3|NZ_CP032910.1_401537_403241_+	TIGR00066, Contains:_Gamma-glutamyltranspeptidase_large_chain, gamma-glutamyltranspeptidase	NA|257aa|up_2|NZ_CP032910.1_403480_404251_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|51aa|up_1|NZ_CP032910.1_406931_407084_+	pfam18809, PBECR1, phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	NA|66aa|up_0|NZ_CP032910.1_408057_408255_+	NA	NA|659aa|down_0|NZ_CP032910.1_408671_410648_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|278aa|down_1|NZ_CP032910.1_410644_411478_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|441aa|down_2|NZ_CP032910.1_411543_412866_-	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|315aa|down_3|NZ_CP032910.1_412975_413920_-	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|408aa|down_4|NZ_CP032910.1_413932_415156_-	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|131aa|down_5|NZ_CP032910.1_415165_415558_-	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|187aa|down_6|NZ_CP032910.1_415573_416134_-	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|221aa|down_7|NZ_CP032910.1_416423_417086_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|436aa|down_8|NZ_CP032910.1_417092_418400_-	NA	NA|432aa|down_9|NZ_CP032910.1_418590_419886_+	COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
GCF_006338285.1_ASM633828v1	NZ_CP032910	Helicobacter pylori strain 20-A-EK1 chromosome, complete genome	2	419634-419719	2	CRISPRCasFinder	no		csx1,cas2,cas14j,cas4,cas3,DEDDh	Orphan	GTTCTTGAACCACTACTTCTCGCATG	26	0	0	NA	NA	NA	1	1	Orphan	csx1,cas2,cas14j,cas4,cas3,DEDDh	NA|66aa|up_9|NZ_CP032910.1_408057_408255_+,NA|436aa|up_0|NZ_CP032910.1_417092_418400_-,NA|37aa|down_7|NZ_CP032910.1_427564_427675_+,NA|512aa|down_9|NZ_CP032910.1_428526_430062_-	NA|66aa|up_9|NZ_CP032910.1_408057_408255_+	NA	NA|659aa|up_8|NZ_CP032910.1_408671_410648_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|278aa|up_7|NZ_CP032910.1_410644_411478_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|441aa|up_6|NZ_CP032910.1_411543_412866_-	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|315aa|up_5|NZ_CP032910.1_412975_413920_-	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|408aa|up_4|NZ_CP032910.1_413932_415156_-	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|131aa|up_3|NZ_CP032910.1_415165_415558_-	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|187aa|up_2|NZ_CP032910.1_415573_416134_-	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|221aa|up_1|NZ_CP032910.1_416423_417086_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|436aa|up_0|NZ_CP032910.1_417092_418400_-	NA	NA|349aa|down_0|NZ_CP032910.1_419895_420942_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|337aa|down_1|NZ_CP032910.1_421111_422122_-	TIGR00749, Glucokinase_Glucose_kinase	NA|228aa|down_2|NZ_CP032910.1_422108_422792_-	TIGR01198, 6-phosphogluconolactonase_6PGL	NA|426aa|down_3|NZ_CP032910.1_422802_424080_-	COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism]	NA|609aa|down_4|NZ_CP032910.1_424145_425972_+	TIGR01196, Phosphogluconate_dehydratase, 6-phosphogluconate dehydratase	NA|209aa|down_5|NZ_CP032910.1_425990_426617_+	TIGR01182, KHG/KDPG_aldolase_	NA|291aa|down_6|NZ_CP032910.1_426686_427559_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|37aa|down_7|NZ_CP032910.1_427564_427675_+	NA	NA|251aa|down_8|NZ_CP032910.1_427756_428509_-	cd05346, SDR_c5, classical (c) SDR, subgroup 5	NA|512aa|down_9|NZ_CP032910.1_428526_430062_-	NA
GCF_006338285.1_ASM633828v1	NZ_CP032910	Helicobacter pylori strain 20-A-EK1 chromosome, complete genome	3	961679-961868	1	CRT	no		csx1,cas2,cas14j,cas4,cas3,DEDDh	Orphan	CTTCAATCAAGGGACTTAT	19	0	0	NA	NA	I-B	3	3	Orphan	csx1,cas2,cas14j,cas4,cas3,DEDDh	NA,NA|220aa|down_8|NZ_CP032910.1_974928_975588_+	NA|378aa|up_9|NZ_CP032910.1_942839_943973_+	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|676aa|up_8|NZ_CP032910.1_943981_946009_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|518aa|up_7|NZ_CP032910.1_946847_948401_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|527aa|up_6|NZ_CP032910.1_948421_950002_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|515aa|up_5|NZ_CP032910.1_950789_952334_-	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|814aa|up_4|NZ_CP032910.1_952578_955020_-	COG1629, CirA, Outer membrane receptor proteins, mostly Fe transport [Inorganic ion transport and metabolism]	NA|144aa|up_3|NZ_CP032910.1_955196_955628_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|1086aa|up_2|NZ_CP032910.1_955632_958890_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|231aa|up_1|NZ_CP032910.1_958988_959681_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|333aa|up_0|NZ_CP032910.1_959825_960824_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|367aa|down_0|NZ_CP032910.1_968516_969617_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|69aa|down_1|NZ_CP032910.1_969684_969891_-	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|194aa|down_2|NZ_CP032910.1_970019_970601_+	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|382aa|down_3|NZ_CP032910.1_970597_971743_+	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|327aa|down_4|NZ_CP032910.1_971681_972662_+	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|181aa|down_5|NZ_CP032910.1_972662_973205_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|304aa|down_6|NZ_CP032910.1_973220_974132_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|268aa|down_7|NZ_CP032910.1_974128_974932_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|220aa|down_8|NZ_CP032910.1_974928_975588_+	NA	NA|201aa|down_9|NZ_CP032910.1_975589_976192_+	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]
