assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006337385.1_ASM633738v1	NZ_CP032479	Helicobacter pylori strain 21-F-EK1 chromosome, complete genome	1	350863-351090	1	CRISPRCasFinder	no		cas3,DEDDh	Orphan	CGCTAACAATGAAATAAACACCAAAGAAAC	30	0	0	NA	NA	NA	3	3	Orphan	cas3,DEDDh	NA|69aa|up_8|NZ_CP032479.1_340190_340397_+,NA|145aa|up_5|NZ_CP032479.1_341895_342330_+,NA|67aa|up_1|NZ_CP032479.1_347328_347529_-,NA|436aa|down_8|NZ_CP032479.1_359880_361188_-	NA|186aa|up_9|NZ_CP032479.1_339601_340159_+	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|69aa|up_8|NZ_CP032479.1_340190_340397_+	NA	NA|77aa|up_7|NZ_CP032479.1_340433_340664_+	pfam04316, FlgM, Anti-sigma-28 factor, FlgM	NA|313aa|up_6|NZ_CP032479.1_340825_341764_+	TIGR00675, Modification_methylase, DNA-methyltransferase (dcm)	NA|145aa|up_5|NZ_CP032479.1_341895_342330_+	NA	NA|607aa|up_4|NZ_CP032479.1_342331_344152_+	PRK08471, flgK, flagellar hook-associated protein FlgK; Validated	NA|568aa|up_3|NZ_CP032479.1_344351_346055_+	TIGR00066, Contains:_Gamma-glutamyltranspeptidase_large_chain, gamma-glutamyltranspeptidase	NA|257aa|up_2|NZ_CP032479.1_346320_347091_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|67aa|up_1|NZ_CP032479.1_347328_347529_-	NA	NA|942aa|up_0|NZ_CP032479.1_347497_350323_+	pfam18763, ddrB-ParB, ddrB-like ParB superfamily domain	NA|659aa|down_0|NZ_CP032479.1_351444_353421_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|278aa|down_1|NZ_CP032479.1_353431_354265_-	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|441aa|down_2|NZ_CP032479.1_354330_355653_-	PRK08470, PRK08470, adenylosuccinate lyase; Provisional	NA|315aa|down_3|NZ_CP032479.1_355762_356707_-	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	NA|408aa|down_4|NZ_CP032479.1_356719_357943_-	PRK09622, porA, 2-oxoacid:ferredoxin oxidoreductase subunit alpha	NA|131aa|down_5|NZ_CP032479.1_357952_358345_-	PRK09625, porD, pyruvate flavodoxin oxidoreductase subunit delta; Reviewed	NA|187aa|down_6|NZ_CP032479.1_358360_358921_-	PRK05844, PRK05844, pyruvate flavodoxin oxidoreductase subunit gamma; Validated	NA|221aa|down_7|NZ_CP032479.1_359211_359874_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|436aa|down_8|NZ_CP032479.1_359880_361188_-	NA	NA|399aa|down_9|NZ_CP032479.1_361373_362570_+	COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]
GCF_006337385.1_ASM633738v1	NZ_CP032479	Helicobacter pylori strain 21-F-EK1 chromosome, complete genome	2	548323-548399	2	CRISPRCasFinder	no		cas3,DEDDh	Orphan	TCAATCCGCTTTTTAATCTTTAA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|43aa|up_4|NZ_CP032479.1_542190_542319_+,NA|104aa|down_0|NZ_CP032479.1_548472_548784_+,NA|615aa|down_9|NZ_CP032479.1_559588_561433_+	NA|606aa|up_9|NZ_CP032479.1_534445_536263_-	PRK05841, flgE, flagellar hook protein FlgE; Validated	NA|297aa|up_8|NZ_CP032479.1_536259_537150_-	PRK05842, flgD, flagellar hook assembly protein FlgD	NA|522aa|up_7|NZ_CP032479.1_537200_538766_-	pfam02120, Flg_hook, Flagellar hook-length control protein FliK	NA|203aa|up_6|NZ_CP032479.1_539956_540565_+	PRK05632, PRK05632, phosphate acetyltransferase; Reviewed	NA|100aa|up_5|NZ_CP032479.1_541880_542180_+	cd02230, cupin_HP0902-like, Helicobacter pylori HP0902 and related proteins, cupin domain	NA|43aa|up_4|NZ_CP032479.1_542190_542319_+	NA	NA|243aa|up_3|NZ_CP032479.1_542427_543156_+	TIGR00073, nickel_incorporation_protein_HypB, hydrogenase accessory protein HypB	NA|80aa|up_2|NZ_CP032479.1_543155_543395_+	COG0298, HypC, Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]	NA|371aa|up_1|NZ_CP032479.1_543394_544507_+	PRK15062, PRK15062, hydrogenase isoenzymes formation protein HypD; Provisional	NA|735aa|up_0|NZ_CP032479.1_545494_547699_+	pfam18304, SabA_adhesion, SabA N-terminal extracellular adhesion domain	NA|104aa|down_0|NZ_CP032479.1_548472_548784_+	NA	NA|91aa|down_1|NZ_CP032479.1_548770_549043_+	COG3041, COG3041, Uncharacterized protein conserved in bacteria [Function unknown]	NA|175aa|down_2|NZ_CP032479.1_549151_549676_-	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	NA|283aa|down_3|NZ_CP032479.1_549815_550664_+	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs	NA|327aa|down_4|NZ_CP032479.1_550656_551637_+	pfam01032, FecCD, FecCD transport family	NA|256aa|down_5|NZ_CP032479.1_551636_552404_+	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|1314aa|down_6|NZ_CP032479.1_552474_556416_-	pfam02691, VacA, Vacuolating cyotoxin	NA|466aa|down_7|NZ_CP032479.1_556638_558036_-	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated	NA|487aa|down_8|NZ_CP032479.1_558036_559497_-	pfam03023, MVIN, MviN-like protein	NA|615aa|down_9|NZ_CP032479.1_559588_561433_+	NA
GCF_006337385.1_ASM633738v1	NZ_CP032479	Helicobacter pylori strain 21-F-EK1 chromosome, complete genome	3	1516779-1517040	1	PILER-CR	no	DEDDh	cas3,DEDDh	Unclear	TCACCATAGTTTAACTCGCAAGCTTTAGAGTAATATTCAAAAGCTTTTTTAA	52	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh	NA|244aa|up_5|NZ_CP032479.1_1512209_1512941_-,NA|299aa|up_4|NZ_CP032479.1_1512933_1513830_-,NA|69aa|up_3|NZ_CP032479.1_1513842_1514049_-,NA|99aa|down_0|NZ_CP032479.1_1517637_1517934_-	NA|439aa|up_9|NZ_CP032479.1_1505762_1507079_-	PRK14856, nhaA, sodium/proton antiporter NhaA	NA|950aa|up_8|NZ_CP032479.1_1507102_1509952_-	PRK13909, PRK13909, RecB-like helicase	NA|265aa|up_7|NZ_CP032479.1_1510202_1510997_+	PRK05299, rpsB, 30S ribosomal protein S2; Provisional	NA|356aa|up_6|NZ_CP032479.1_1510996_1512064_+	PRK09377, tsf, elongation factor Ts; Provisional	NA|244aa|up_5|NZ_CP032479.1_1512209_1512941_-	NA	NA|299aa|up_4|NZ_CP032479.1_1512933_1513830_-	NA	NA|69aa|up_3|NZ_CP032479.1_1513842_1514049_-	NA	NA|291aa|up_2|NZ_CP032479.1_1514045_1514918_-	COG0158, Fbp, Fructose-1,6-bisphosphatase [Carbohydrate transport and metabolism]	NA|218aa|up_1|NZ_CP032479.1_1514988_1515642_+	TIGR01163, Ribulose-phosphate_3-epimerase, ribulose-phosphate 3-epimerase	DEDDh|288aa|up_0|NZ_CP032479.1_1515619_1516483_+	PRK08517, PRK08517, 3'-5' exonuclease	NA|99aa|down_0|NZ_CP032479.1_1517637_1517934_-	NA	NA|436aa|down_1|NZ_CP032479.1_1517953_1519261_-	COG1293, COG1293, Predicted RNA-binding protein homologous to eukaryotic snRNP [Transcription]	NA|525aa|down_2|NZ_CP032479.1_1519257_1520832_-	COG0497, RecN, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|285aa|down_3|NZ_CP032479.1_1520844_1521699_-	COG0061, nadF, NAD kinase [Coenzyme metabolism]	NA|243aa|down_4|NZ_CP032479.1_1521884_1522613_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|587aa|down_5|NZ_CP032479.1_1522623_1524384_-	COG1479, COG1479, Uncharacterized conserved protein [Function unknown]	NA|366aa|down_6|NZ_CP032479.1_1524515_1525613_-	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|381aa|down_7|NZ_CP032479.1_1525882_1527025_-	COG0686, Ald, Alanine dehydrogenase [Amino acid transport and metabolism]	NA|323aa|down_8|NZ_CP032479.1_1527228_1528197_+	TIGR01229, rocF_arginase, arginase	NA|842aa|down_9|NZ_CP032479.1_1528552_1531078_+	COG4772, FecA, Outer membrane receptor for Fe3+-dicitrate [Inorganic ion transport and metabolism]
