assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006337365.1_ASM633736v1	NZ_CP032478	Helicobacter pylori strain 25-A-EK9 chromosome, complete genome	1	208311-208404	1	CRISPRCasFinder	no		cas3,DEDDh	Orphan	TTTTTTTGGGGGTTTGATCTTTTTCTTTT	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|69aa|up_1|NZ_CP032478.1_205568_205775_+,NA|159aa|down_3|NZ_CP032478.1_212495_212972_+,NA|154aa|down_9|NZ_CP032478.1_218915_219377_+	NA|349aa|up_9|NZ_CP032478.1_198694_199741_+	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|196aa|up_8|NZ_CP032478.1_199749_200337_+	smart00287, SH3b, Bacterial SH3 domain homologues	NA|264aa|up_7|NZ_CP032478.1_200344_201136_+	TIGR00507, Shikimate_dehydrogenase, shikimate dehydrogenase	NA|645aa|up_6|NZ_CP032478.1_201135_203070_+	COG0557, VacB, Exoribonuclease R [Transcription]	NA|341aa|up_5|NZ_CP032478.1_203059_204082_+	PRK08487, PRK08487, DNA polymerase III subunit delta; Validated	NA|143aa|up_4|NZ_CP032478.1_204234_204663_+	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|182aa|up_3|NZ_CP032478.1_204672_205218_+	PRK08486, PRK08486, single-stranded DNA-binding protein; Provisional	NA|86aa|up_2|NZ_CP032478.1_205240_205498_+	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|69aa|up_1|NZ_CP032478.1_205568_205775_+	NA	NA|707aa|up_0|NZ_CP032478.1_205993_208114_+	pfam18304, SabA_adhesion, SabA N-terminal extracellular adhesion domain	NA|77aa|down_0|NZ_CP032478.1_208918_209149_-	COG2841, COG2841, Uncharacterized protein conserved in bacteria [Function unknown]	NA|848aa|down_1|NZ_CP032478.1_209268_211812_+	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed	NA|191aa|down_2|NZ_CP032478.1_211813_212386_+	PRK04056, PRK04056, septum formation inhibitor Maf	NA|159aa|down_3|NZ_CP032478.1_212495_212972_+	NA	NA|335aa|down_4|NZ_CP032478.1_213448_214453_-	PRK13287, amiF, formamidase; Provisional	NA|376aa|down_5|NZ_CP032478.1_214618_215746_-	COG0505, CarA, Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]	NA|184aa|down_6|NZ_CP032478.1_215745_216297_-	COG2952, COG2952, Uncharacterized protein conserved in bacteria [Function unknown]	NA|416aa|down_7|NZ_CP032478.1_216375_217623_-	pfam13231, PMT_2, Dolichyl-phosphate-mannose-protein mannosyltransferase	NA|299aa|down_8|NZ_CP032478.1_217626_218523_-	pfam00892, EamA, EamA-like transporter family	NA|154aa|down_9|NZ_CP032478.1_218915_219377_+	NA
GCF_006337365.1_ASM633736v1	NZ_CP032478	Helicobacter pylori strain 25-A-EK9 chromosome, complete genome	2	270267-270373	2	CRISPRCasFinder	no		cas3,DEDDh	Orphan	AACAAAAGACAGAACAAGAAAAACAAAAGACA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh	NA|75aa|up_3|NZ_CP032478.1_265572_265797_+,NA	NA|165aa|up_9|NZ_CP032478.1_250963_251458_+	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|126aa|up_8|NZ_CP032478.1_251502_251880_+	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|2891aa|up_7|NZ_CP032478.1_252101_260774_+	PRK09603, PRK09603, DNA-directed RNA polymerase subunit beta/beta'	NA|136aa|up_6|NZ_CP032478.1_260862_261270_+	PRK05163, rpsL, 30S ribosomal protein S12; Validated	NA|156aa|up_5|NZ_CP032478.1_261285_261753_+	PRK05302, PRK05302, 30S ribosomal protein S7; Validated	NA|693aa|up_4|NZ_CP032478.1_261764_263843_+	PRK00007, PRK00007, elongation factor G; Reviewed	NA|75aa|up_3|NZ_CP032478.1_265572_265797_+	NA	NA|350aa|up_2|NZ_CP032478.1_265986_267036_-	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]	NA|443aa|up_1|NZ_CP032478.1_267097_268426_+	COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|347aa|up_0|NZ_CP032478.1_268412_269453_+	TIGR01296, Aspartate-semialdehyde_dehydrogenase, aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)	NA|248aa|down_0|NZ_CP032478.1_271220_271964_-	COG3338, Cah, Carbonic anhydrase [Inorganic ion transport and metabolism]	NA|392aa|down_1|NZ_CP032478.1_272235_273411_+	PRK03545, PRK03545, putative arabinose transporter; Provisional	NA|460aa|down_2|NZ_CP032478.1_273578_274958_+	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA	NA|384aa|down_3|NZ_CP032478.1_274983_276135_+	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism]	NA|254aa|down_4|NZ_CP032478.1_276143_276905_-	PRK10696, PRK10696, tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional	NA|444aa|down_5|NZ_CP032478.1_276923_278255_-	cd17472, MFS_YajR_like, Escherichia coli inner membrane transport protein YajR and similar multidrug-efflux transporters of the Major Facilitator Superfamily	NA|419aa|down_6|NZ_CP032478.1_278582_279839_+	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism]	NA|414aa|down_7|NZ_CP032478.1_279850_281092_+	PRK05362, PRK05362, phosphopentomutase; Provisional	NA|234aa|down_8|NZ_CP032478.1_281088_281790_+	TIGR00107, Purine_nucleoside_phosphorylase_DeoD-type, purine-nucleoside phosphorylase, family 1 (deoD)	NA|634aa|down_9|NZ_CP032478.1_282262_284164_+	pfam18304, SabA_adhesion, SabA N-terminal extracellular adhesion domain
GCF_006337365.1_ASM633736v1	NZ_CP032478	Helicobacter pylori strain 25-A-EK9 chromosome, complete genome	3	768137-768334	1,3	PILER-CR,CRISPRCasFinder	no		cas3,DEDDh	Orphan	TTCAATCAAGGCACTTATAA,TTCAATCAAGGCACTTATAATTTTAAT	20,27	0	0	NA	NA	I-B:I-B	3,3	3	Orphan	cas3,DEDDh	NA|204aa|up_9|NZ_CP032478.1_748604_749216_+,NA|220aa|down_8|NZ_CP032478.1_781428_782088_+	NA|204aa|up_9|NZ_CP032478.1_748604_749216_+	NA	NA|380aa|up_8|NZ_CP032478.1_749208_750348_+	COG0827, COG0827, Adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|676aa|up_7|NZ_CP032478.1_750351_752379_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|518aa|up_6|NZ_CP032478.1_753215_754769_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|530aa|up_5|NZ_CP032478.1_754790_756380_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|515aa|up_4|NZ_CP032478.1_757170_758715_-	pfam02521, HP_OMP_2, Putative outer membrane protein	NA|144aa|up_3|NZ_CP032478.1_761649_762081_-	pfam01300, Sua5_yciO_yrdC, Telomere recombination	NA|1086aa|up_2|NZ_CP032478.1_762085_765343_-	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|231aa|up_1|NZ_CP032478.1_765440_766133_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|333aa|up_0|NZ_CP032478.1_766277_767276_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|370aa|down_0|NZ_CP032478.1_774985_776095_+	pfam01856, HP_OMP, Helicobacter outer membrane protein	NA|69aa|down_1|NZ_CP032478.1_776154_776361_-	TIGR00013, Probable_tautomerase_K2, 4-oxalocrotonate tautomerase family enzyme	NA|194aa|down_2|NZ_CP032478.1_776519_777101_+	TIGR00615, Recombination_protein_RecR, recombination protein RecR	NA|382aa|down_3|NZ_CP032478.1_777097_778243_+	TIGR00094, tRNA_pseudouridine_synthase_D, tRNA pseudouridine synthase, TruD family	NA|327aa|down_4|NZ_CP032478.1_778181_779162_+	PRK02870, PRK02870, heat shock protein HtpX; Provisional	NA|181aa|down_5|NZ_CP032478.1_779162_779705_+	TIGR00063, GTP_cyclohydrolase_1, GTP cyclohydrolase I	NA|304aa|down_6|NZ_CP032478.1_779720_780632_+	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|268aa|down_7|NZ_CP032478.1_780628_781432_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|220aa|down_8|NZ_CP032478.1_781428_782088_+	NA	NA|201aa|down_9|NZ_CP032478.1_782091_782694_+	COG0720, COG0720, 6-pyruvoyl-tetrahydropterin synthase [Coenzyme metabolism]
