The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP032473	Helicobacter pylori strain 476-A2-EK2 chromosome, complete genome	1649543	16288	71166	1649543	transposase,tRNA,protease,integrase	Helicobacter_phage(30.77%)	47	NA	NA
WP_139541551.1|16288_16972_-|protease	CAAX protease	protease	NA	NA	NA	NA
WP_139541552.1|17028_18216_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA	NA
WP_139541553.1|18311_19472_-|tRNA	L-seryl-tRNA(Sec) selenium transferase	tRNA	NA	NA	NA	NA
WP_139541554.1|21338_22667_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	93.5	1.3e-191
WP_000717709.1|22703_23120_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	97.8	1.9e-75
WP_139541555.1|24477_24804_-	Plug domain-containing protein	NA	NA	NA	NA	NA
WP_139541556.1|24787_25141_-	FolB domain-containing protein	NA	NA	NA	NA	NA
WP_000113863.1|25137_25926_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA	NA
WP_139541557.1|25905_27282_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
WP_079300546.1|27291_28491_-	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_139541558.1|28576_29803_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
WP_139541559.1|29799_30834_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A1V0SE20	Indivirus	27.9	2.2e-16
WP_139541560.1|30815_31532_+	methyltransferase	NA	NA	NA	NA	NA
WP_139541561.1|31556_33908_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	27.6	1.9e-44
WP_000338876.1|33904_34342_-	CopD family copper resistance protein	NA	NA	NA	NA	NA
WP_139541562.1|37040_38108_-	LptF/LptG family permease	NA	NA	NA	NA	NA
WP_139541563.1|38162_38723_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000889343.1|38732_39269_-	50S ribosomal protein L25/general stress protein Ctc	NA	NA	NA	NA	NA
WP_139541564.1|39323_40274_-	transaldolase	NA	NA	NA	NA	NA
WP_139541565.1|40277_41621_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_001168590.1|41624_42236_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000569296.1|42247_42517_-	NifU family protein	NA	NA	NA	NA	NA
WP_139541566.1|42657_44259_+	inorganic phosphate transporter	NA	M4QMY4	Ostreococcus_lucimarinus_virus	31.9	4.9e-39
WP_139541567.1|44361_45699_+	DUF21 domain-containing protein	NA	NA	NA	NA	NA
WP_139541568.1|45714_47247_+	TolC family protein	NA	NA	NA	NA	NA
WP_000071820.1|47258_48248_+	biotin/lipoyl-binding protein	NA	NA	NA	NA	NA
WP_139541569.1|48259_49357_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_139541570.1|49353_50484_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_139541571.1|50470_51043_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	35.3	7.1e-17
WP_000395050.1|51053_51500_+	protoporphyrinogen oxidase HemJ	NA	NA	NA	NA	NA
WP_139541572.1|51509_52250_+	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	NA	NA	NA	NA	NA
WP_139541573.1|52259_52529_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_139541574.1|52532_53330_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_139541575.1|53330_54578_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.0	2.7e-77
WP_139541576.1|54587_57125_+	anaphase-promoting protein	NA	NA	NA	NA	NA
WP_139541577.1|57121_59170_+	DNA helicase UvrD	NA	A7KV33	Bacillus_phage	34.6	2.9e-89
WP_139541578.1|59166_59823_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
WP_040163668.1|59832_60396_+	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_024111991.1|60395_60869_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	44.9	4.8e-27
WP_139541579.1|60870_61446_+	dTMP kinase	NA	Q2XUX0	environmental_halophage	33.6	1.3e-10
WP_139541580.1|61433_62009_+	ComF family protein	NA	NA	NA	NA	NA
WP_139542543.1|63726_65529_+	relaxase	NA	NA	NA	NA	NA
WP_001120380.1|66682_67750_+|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	26.7	1.3e-08
WP_139541581.1|68063_68867_-	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_127919484.1|68838_69090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000717709.1|69384_69801_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	97.8	1.9e-75
WP_139541582.1|69837_71166_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	93.3	1.1e-190
>prophage 2
NZ_CP032473	Helicobacter pylori strain 476-A2-EK2 chromosome, complete genome	1649543	453826	513645	1649543	transposase,tRNA	Helicobacter_phage(35.29%)	57	NA	NA
WP_139541782.1|453826_454255_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5REW8	Helicobacter_phage	97.9	9.5e-75
WP_139541783.1|454324_455608_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5REX3	Helicobacter_phage	93.7	1.1e-203
WP_139542553.1|455564_455885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033590451.1|456271_456451_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139541784.1|456864_457674_-	flagellar hook-basal body complex protein	NA	NA	NA	NA	NA
WP_139541785.1|457728_459003_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	25.5	3.3e-30
WP_139541786.1|459187_461752_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	46.9	1.0e-83
WP_139541787.1|461739_464076_-	ATP-dependent deoxyribonuclease AddB	NA	NA	NA	NA	NA
WP_139541788.1|464072_465998_-	transketolase	NA	NA	NA	NA	NA
WP_139541789.1|466044_466887_-	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_139541790.1|466852_467560_-	TlyA family rRNA (cytidine-2'-O)-methyltransferase	NA	NA	NA	NA	NA
WP_000523550.1|467559_468075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139541791.1|468145_469069_+	aspartate carbamoyltransferase	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	30.9	6.7e-25
WP_139541792.1|469283_470723_+	outer membrane beta-barrel protein HofB	NA	NA	NA	NA	NA
WP_139541793.1|470813_472469_+	ATP-binding cassette domain-containing protein	NA	A0A076FI99	Aureococcus_anophage	24.4	2.1e-29
WP_139541794.1|472462_473086_+	neuraminyllactose-binding hemagglutinin family protein	NA	NA	NA	NA	NA
WP_139541795.1|473089_473659_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_000717709.1|475023_475440_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	97.8	1.9e-75
WP_139541582.1|475476_476805_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	93.3	1.1e-190
WP_139520514.1|476914_477610_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139541796.1|477667_478663_+	HoxN/HupN/NixA family nickel/cobalt transporter	NA	NA	NA	NA	NA
WP_139541797.1|478666_479182_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139541798.1|479317_480634_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
WP_000648263.1|481281_481482_-	copper-binding metallochaperone CopP	NA	NA	NA	NA	NA
WP_139541799.1|481482_483720_-	copper-translocating P-type ATPase CopA	NA	A0A218MNH6	uncultured_virus	32.2	1.1e-89
WP_108383275.1|483716_484430_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_139541800.1|484419_484674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000805279.1|484676_486575_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	A0A0P0CCN8	Ostreococcus_mediterraneus_virus	44.1	1.0e-99
WP_139541801.1|486583_487585_-	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_000772151.1|487585_487960_-	response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	33.6	3.5e-09
WP_139541802.1|488206_488851_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_139541803.1|488983_489391_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139541804.1|489393_489687_-	prokaryotic metallothionein family protein	NA	NA	NA	NA	NA
WP_108363985.1|489629_490166_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_139541805.1|490162_491200_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_139541806.1|491200_491950_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	35.8	1.6e-29
WP_139521713.1|491942_492395_-	Sec-independent protein translocase subunit TatB	NA	NA	NA	NA	NA
WP_139541807.1|492462_493473_-	Holliday junction branch migration DNA helicase RuvB	NA	NA	NA	NA	NA
WP_139541808.1|493473_494286_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	34.5	1.7e-40
WP_139541809.1|494434_495157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_139542554.1|495146_495986_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_139541810.1|495997_496939_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_139542556.1|497002_498271_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_139541811.1|498207_498861_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_139541812.1|498857_499745_+	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_139542555.1|499818_500265_+|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein TsaB	tRNA	NA	NA	NA	NA
WP_000261704.1|500318_501200_+	homoserine kinase	NA	NA	NA	NA	NA
WP_078249102.1|501171_501441_+	YlxR family protein	NA	NA	NA	NA	NA
WP_139541813.1|501437_504272_+	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.9	2.5e-30
WP_127971602.1|504271_504607_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA	NA
WP_139541814.1|504599_505040_+	ribosome maturation factor RimP	NA	NA	NA	NA	NA
WP_139541815.1|505148_507137_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.4	1.2e-82
WP_139541816.1|507335_508448_+	metallophosphoesterase	NA	NA	NA	NA	NA
WP_139541817.1|508792_509464_+	response regulator-like transcription factor HsrA	NA	NA	NA	NA	NA
WP_139541818.1|509970_511014_-	DHH family phosphoesterase	NA	NA	NA	NA	NA
WP_000717709.1|511863_512280_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	97.8	1.9e-75
WP_139541554.1|512316_513645_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	93.5	1.3e-191
>prophage 3
NZ_CP032473	Helicobacter pylori strain 476-A2-EK2 chromosome, complete genome	1649543	1373873	1392467	1649543	transposase,integrase	Helicobacter_phage(87.5%)	16	1373074:1373089	1390748:1390763
1373074:1373089	attL	TCTTGCGTGTGGATCA	NA	NA	NA	NA
WP_000813733.1|1373873_1374287_-	nucleoside-diphosphate kinase	NA	A0A0G2Y5H2	Acanthamoeba_polyphaga_mimivirus	39.7	9.3e-19
WP_139542375.1|1374353_1375511_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	56.6	6.9e-120
WP_139542376.1|1375809_1376223_+	hypothetical protein	NA	A0A1S5RG53	Helicobacter_phage	72.7	1.1e-19
WP_139542377.1|1376331_1377480_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S5REX0	Helicobacter_phage	88.5	1.2e-188
WP_139542378.1|1377476_1377689_+	hypothetical protein	NA	A0A1S5RGY6	Helicobacter_phage	98.6	2.7e-30
WP_139542379.1|1377690_1377999_+	hypothetical protein	NA	A0A1S5RGY3	Helicobacter_phage	89.2	6.0e-47
WP_000717709.1|1378228_1378645_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	97.8	1.9e-75
WP_139541582.1|1378681_1380010_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A1S5RHD5	Helicobacter_phage	93.3	1.1e-190
WP_139542380.1|1380957_1381224_+	hypothetical protein	NA	A0A1S5RGN6	Helicobacter_phage	64.8	4.9e-21
WP_139542381.1|1381233_1382409_+	helicase DnaB	NA	A0A1S5RH16	Helicobacter_phage	92.8	6.0e-212
WP_139542382.1|1382405_1383992_+	DNA primase	NA	A0A1S5RH32	Helicobacter_phage	93.7	6.7e-283
WP_139542383.1|1383988_1385737_+	UV radiation resistance protein	NA	A0A1S5RF93	Helicobacter_phage	83.6	4.7e-136
WP_139542384.1|1385804_1390670_+	DUF3519 domain-containing protein	NA	A0A1S5RH15	Helicobacter_phage	93.3	0.0e+00
WP_139542584.1|1390686_1391088_+	hypothetical protein	NA	A0A1S5RF70	Helicobacter_phage	86.5	2.1e-60
1390748:1390763	attR	TGATCCACACGCAAGA	NA	NA	NA	NA
WP_139542385.1|1391084_1391672_+	hypothetical protein	NA	A0A1S5REZ9	Helicobacter_phage	96.9	1.4e-97
WP_139542386.1|1391909_1392467_+	Coiled-coil domain-containing protein	NA	A0A1S5RGZ3	Helicobacter_phage	95.7	2.9e-92
