The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040878	Enterococcus faecium strain HB-1 chromosome, complete genome	2618436	540	27954	2618436	tail,integrase,portal,capsid,head,terminase	Enterococcus_phage(40.74%)	40	6552:6566	28184:28198
WP_086322650.1|540_1323_-|tail	phage tail protein	tail	D7RWD9	Brochothrix_phage	43.1	5.8e-54
WP_086322608.1|1340_4460_-|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	78.2	2.9e-165
WP_002318903.1|4476_4764_-	hypothetical protein	NA	D7RWD7	Brochothrix_phage	44.3	2.4e-13
WP_002323702.1|5230_5743_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	66.3	7.4e-58
WP_025479159.1|5753_6146_-	hypothetical protein	NA	Q77K20	Lactococcus_phage	73.8	1.5e-47
WP_002349652.1|6145_6484_-	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	58.9	8.7e-31
WP_002293014.1|6467_6794_-	hypothetical protein	NA	C9E2J7	Enterococcus_phage	70.2	1.2e-37
6552:6566	attL	AGTCTTTCCTTCAAT	NA	NA	NA	NA
WP_081139786.1|6790_7120_-	hypothetical protein	NA	A0A0S2MYD5	Enterococcus_phage	74.5	1.9e-38
WP_002322710.1|7131_7395_-	hypothetical protein	NA	D2J062	Enterococcus_phage	72.9	5.0e-10
WP_081139784.1|7412_8336_-|capsid	phage major capsid protein	capsid	A0A1B1V000	Enterococcus_phage	77.2	3.1e-139
WP_081139782.1|8348_8951_-	DUF4355 domain-containing protein	NA	A0A097BY91	Enterococcus_phage	50.2	2.7e-35
WP_081139780.1|9078_10005_-|head	phage head morphogenesis protein	head	A0A1L2JXH2	Streptococcus_phage	58.7	1.3e-92
WP_081139777.1|10009_11509_-|portal	phage portal protein	portal	A0A097BY86	Enterococcus_phage	79.8	1.9e-223
WP_081139775.1|11521_12766_-|terminase	PBSX family phage terminase large subunit	terminase	D2IYW1	Enterococcus_phage	81.4	1.1e-200
WP_002342959.1|12752_13286_-|terminase	terminase small subunit	terminase	A0A059NT97	Lactococcus_phage	40.7	9.2e-19
WP_081139773.1|13312_13537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025479156.1|13784_14234_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002323918.1|14262_15183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322607.1|15557_15974_-	autolysin	NA	C9E2P5	Enterococcus_phage	68.1	1.1e-46
WP_010722193.1|16216_16516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322606.1|16512_16734_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002335859.1|16734_17046_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	73.7	5.3e-35
WP_086322605.1|17222_17537_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	36.4	1.7e-09
WP_086322604.1|17536_17842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010725027.1|17838_18000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073441489.1|18014_18374_-	DUF1064 domain-containing protein	NA	A0A1P8BKR1	Lactococcus_phage	49.2	1.1e-18
WP_086322603.1|18370_19222_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	28.7	8.1e-25
WP_002342029.1|19239_20073_-	hypothetical protein	NA	J7KBV5	Streptococcus_phage	75.4	1.7e-48
WP_086322602.1|20079_20766_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	70.0	2.9e-89
WP_010738857.1|20771_21443_-	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	47.8	5.5e-29
WP_086322601.1|21435_21777_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139439761.1|21955_22654_-	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	33.8	2.3e-25
WP_086322599.1|22708_23374_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002337281.1|23654_23882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002337282.1|23894_24080_-	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	53.3	5.4e-11
WP_002315392.1|24383_24758_+	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	38.7	3.2e-18
WP_086322598.1|24762_25191_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002293175.1|25240_25894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047929334.1|26027_26699_+	DUF5067 domain-containing protein	NA	NA	NA	NA	NA
WP_086322597.1|26811_27954_+|integrase	site-specific integrase	integrase	M1PRU8	Streptococcus_phage	37.2	1.4e-56
28184:28198	attR	AGTCTTTCCTTCAAT	NA	NA	NA	NA
>prophage 2
NZ_CP040878	Enterococcus faecium strain HB-1 chromosome, complete genome	2618436	1595814	1604286	2618436		Streptococcus_phage(66.67%)	10	NA	NA
WP_002292339.1|1595814_1596459_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	52.6	4.2e-58
WP_002292340.1|1596473_1596803_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002292342.1|1596816_1597755_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.8	6.1e-34
WP_002292343.1|1597790_1598615_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002288076.1|1598607_1598955_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	41.1	5.1e-18
WP_002292345.1|1599023_1599896_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	60.1	2.1e-89
WP_002310241.1|1600004_1601126_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002292348.1|1601179_1601782_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.0	4.9e-53
WP_099107999.1|1601799_1602003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002292349.1|1602096_1604286_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.7	6.8e-286
>prophage 3
NZ_CP040878	Enterococcus faecium strain HB-1 chromosome, complete genome	2618436	2304221	2327075	2618436	terminase,tail,plate,portal,capsid,holin	Lactobacillus_phage(28.57%)	26	NA	NA
WP_002326206.1|2304221_2305163_-	Abi family protein	NA	A0A059NT88	Lactococcus_phage	45.5	1.2e-77
WP_139439809.1|2305487_2306507_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1G5SA77	Enterococcus_phage	67.2	8.4e-61
WP_002346371.1|2306517_2306715_-|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	87.5	1.0e-23
WP_002315346.1|2306738_2307032_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290625.1|2307069_2307207_-	XkdX family protein	NA	NA	NA	NA	NA
WP_139439810.1|2307208_2307655_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139439811.1|2307666_2309799_-|plate	BppU family phage baseplate upper protein	plate	A0A249XZH9	Enterococcus_phage	54.5	7.0e-102
WP_139439812.1|2309798_2310848_-	hypothetical protein	NA	Q9T1A4	Listeria_phage	32.7	5.1e-21
WP_139439813.1|2310848_2311868_-	hypothetical protein	NA	Q9T1A5	Listeria_phage	54.7	3.4e-102
WP_139439814.1|2311876_2312704_-|tail	phage tail family protein	tail	Q9T1A6	Listeria_phage	42.8	3.4e-52
WP_139439815.1|2312693_2317175_-	tape measure protein	NA	A0A0M5M3L4	Enterococcus_phage	32.2	8.1e-108
WP_139439816.1|2317187_2317808_-	hypothetical protein	NA	O03936	Lactobacillus_phage	42.9	2.5e-36
WP_139439817.1|2317812_2318247_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139439843.1|2318306_2318603_-	Ig domain-containing protein	NA	A0A1P8BL30	Lactococcus_phage	61.4	2.0e-15
WP_139439818.1|2318563_2319031_-|capsid	capsid protein	capsid	O03972	Lactobacillus_phage	64.8	1.7e-45
WP_016629363.1|2319043_2319436_-	hypothetical protein	NA	Q5YA65	Bacillus_phage	47.3	1.1e-29
WP_002314914.1|2319435_2319771_-	hypothetical protein	NA	U3PIU9	Lactobacillus_phage	57.3	2.0e-19
WP_139439819.1|2319770_2320118_-|capsid	capsid protein	capsid	O03932	Lactobacillus_phage	54.5	3.1e-31
WP_104875939.1|2320114_2320510_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139439820.1|2320548_2320794_-	Ig domain-containing protein	NA	A5GYM0	Lactococcus_phage	65.8	2.8e-15
WP_139439821.1|2320811_2321684_-	hypothetical protein	NA	Q6SED2	Lactobacillus_prophage	64.9	4.0e-104
WP_139439822.1|2321702_2322278_-|capsid	capsid protein	capsid	Q9T1B8	Listeria_phage	46.2	3.1e-28
WP_139439823.1|2322387_2323524_-|capsid	capsid protein	capsid	O03929	Lactobacillus_phage	53.8	2.3e-91
WP_139439824.1|2323526_2325080_-|portal	phage portal protein	portal	O03928	Lactobacillus_phage	54.9	1.2e-151
WP_139439844.1|2325073_2326399_-|terminase	PBSX family phage terminase large subunit	terminase	A4L7R3	Lactococcus_phage	59.3	9.6e-158
WP_139439825.1|2326364_2327075_-	hypothetical protein	NA	A0A2P1JTW4	Anoxybacillus_phage	45.9	1.9e-43
>prophage 4
NZ_CP040878	Enterococcus faecium strain HB-1 chromosome, complete genome	2618436	2549456	2604895	2618436	transposase,terminase,tail,plate,portal,capsid,head,holin,tRNA	Enterococcus_phage(31.71%)	70	NA	NA
WP_087628202.1|2549456_2550619_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
WP_002290431.1|2550752_2550938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290430.1|2550954_2551185_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_002290426.1|2551181_2551736_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002290423.1|2551949_2552201_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002290421.1|2552364_2552745_+	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	34.9	2.8e-17
WP_002290420.1|2552751_2553180_+	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_002329377.1|2553244_2553913_+	hypothetical protein	NA	Q9AZW5	Lactococcus_phage	50.3	2.0e-39
WP_002290415.1|2555394_2556741_-	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_002329378.1|2556852_2558202_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_002329379.1|2558318_2559572_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	55.3	4.5e-24
WP_002290411.1|2559642_2560128_-|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
WP_002290410.1|2560150_2560909_-	type I 3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	35.6	2.5e-25
WP_002290409.1|2560924_2562103_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	49.7	2.1e-103
WP_016628702.1|2562331_2564452_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	58.4	7.5e-221
WP_002290407.1|2564623_2565349_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002329381.1|2565338_2565848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016628703.1|2565920_2567369_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.3	1.3e-19
WP_002290404.1|2567368_2568085_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.2	6.1e-34
WP_002290403.1|2568065_2568416_-	SdpI family protein	NA	NA	NA	NA	NA
WP_002290402.1|2568559_2569333_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_081125522.1|2570090_2570393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086322616.1|2571208_2572579_-	hypothetical protein	NA	V5UQY6	Oenococcus_phage	20.9	2.7e-06
WP_139439839.1|2572697_2573672_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A060AHF9	Enterococcus_phage	64.8	4.6e-125
WP_002333628.1|2573671_2574085_-|holin	phage holin family protein	holin	A0A097BY69	Enterococcus_phage	65.4	1.7e-41
WP_047929315.1|2574145_2574274_-	XkdX family protein	NA	NA	NA	NA	NA
WP_086322614.1|2574275_2574650_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322613.1|2574673_2575225_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047929318.1|2575224_2575593_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322612.1|2575597_2576386_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322611.1|2576385_2577294_-|plate	phage baseplate upper protein	plate	A0A1P8BKW9	Lactococcus_phage	24.3	7.8e-10
WP_086322610.1|2577259_2577778_-	CHAP domain-containing protein	NA	NA	NA	NA	NA
WP_086322609.1|2577788_2580677_-	hypothetical protein	NA	D7RWE0	Brochothrix_phage	45.1	2.8e-202
WP_086322650.1|2580676_2581459_-|tail	phage tail protein	tail	D7RWD9	Brochothrix_phage	43.1	5.8e-54
WP_086322608.1|2581476_2584596_-|tail	phage tail tape measure protein	tail	Q9G097	Lactococcus_phage	78.2	2.9e-165
WP_002318903.1|2584612_2584900_-	hypothetical protein	NA	D7RWD7	Brochothrix_phage	44.3	2.4e-13
WP_002293018.1|2584953_2585322_-	hypothetical protein	NA	Q77RZ7	Lactococcus_phage	54.8	8.6e-24
WP_002323702.1|2585367_2585880_-|tail	phage major tail protein, TP901-1 family	tail	D7RWD5	Brochothrix_phage	66.3	7.4e-58
WP_025479159.1|2585890_2586283_-	hypothetical protein	NA	Q77K20	Lactococcus_phage	73.8	1.5e-47
WP_002349652.1|2586282_2586621_-	HK97 gp10 family phage protein	NA	Q77K21	Lactococcus_phage	58.9	8.7e-31
WP_002293014.1|2586604_2586931_-	hypothetical protein	NA	C9E2J7	Enterococcus_phage	70.2	1.2e-37
WP_081139786.1|2586927_2587257_-	hypothetical protein	NA	A0A0S2MYD5	Enterococcus_phage	74.5	1.9e-38
WP_002322710.1|2587268_2587532_-	hypothetical protein	NA	D2J062	Enterococcus_phage	72.9	5.0e-10
WP_081139784.1|2587549_2588473_-|capsid	phage major capsid protein	capsid	A0A1B1V000	Enterococcus_phage	77.2	3.1e-139
WP_081139782.1|2588485_2589088_-	DUF4355 domain-containing protein	NA	A0A097BY91	Enterococcus_phage	50.2	2.7e-35
WP_081139780.1|2589215_2590142_-|head	phage head morphogenesis protein	head	A0A1L2JXH2	Streptococcus_phage	58.7	1.3e-92
WP_081139777.1|2590146_2591646_-|portal	phage portal protein	portal	A0A097BY86	Enterococcus_phage	79.8	1.9e-223
WP_081139775.1|2591658_2592903_-|terminase	PBSX family phage terminase large subunit	terminase	D2IYW1	Enterococcus_phage	81.4	1.1e-200
WP_002342959.1|2592889_2593423_-|terminase	terminase small subunit	terminase	A0A059NT97	Lactococcus_phage	40.7	9.2e-19
WP_081139773.1|2593449_2593674_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025479156.1|2593921_2594371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002323918.1|2594399_2595320_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322607.1|2595694_2596111_-	autolysin	NA	C9E2P5	Enterococcus_phage	68.1	1.1e-46
WP_010722193.1|2596353_2596653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_086322606.1|2596649_2596871_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002335859.1|2596871_2597183_-	hypothetical protein	NA	D2IZY1	Enterococcus_phage	73.7	5.3e-35
WP_086322605.1|2597359_2597674_-	DUF1140 family protein	NA	A0A2H4JAZ4	uncultured_Caudovirales_phage	36.4	1.7e-09
WP_086322604.1|2597673_2597979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_010725027.1|2597975_2598137_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073441489.1|2598151_2598511_-	DUF1064 domain-containing protein	NA	A0A1P8BKR1	Lactococcus_phage	49.2	1.1e-18
WP_086322603.1|2598507_2599359_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	28.7	8.1e-25
WP_002342029.1|2599376_2600210_-	hypothetical protein	NA	J7KBV5	Streptococcus_phage	75.4	1.7e-48
WP_086322602.1|2600216_2600903_-	hypothetical protein	NA	C9E2N1	Enterococcus_phage	70.0	2.9e-89
WP_010738857.1|2600908_2601580_-	DUF1071 domain-containing protein	NA	A0A1B1P7F0	Bacillus_phage	47.8	5.5e-29
WP_086322601.1|2601572_2601914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139439761.1|2602092_2602791_-	phage regulatory protein	NA	D2IYT0	Enterococcus_phage	33.8	2.3e-25
WP_086322599.1|2602845_2603511_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002337281.1|2603791_2604019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002337282.1|2604031_2604217_-	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	53.3	5.4e-11
WP_002315392.1|2604520_2604895_+	helix-turn-helix transcriptional regulator	NA	O03970	Lactobacillus_phage	38.7	3.2e-18
>prophage 1
NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	154417	293	63459	154417	transposase	Streptococcus_phage(21.43%)	52	NA	NA
WP_002290567.1|293_1247_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	1.6e-34
WP_002342376.1|1527_2697_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002377170.1|2972_3155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002319346.1|3393_3798_-	DUF4430 domain-containing protein	NA	NA	NA	NA	NA
WP_002292745.1|3813_4377_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_086322653.1|4390_6874_-	vitamin B12-dependent ribonucleotide reductase	NA	A0A0K2CP92	Brevibacillus_phage	46.5	6.3e-187
WP_002292747.1|7023_7569_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002342380.1|8445_8997_+	dihydroxyacetone kinase subunit L	NA	NA	NA	NA	NA
WP_002290399.1|9577_10876_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_002342383.1|12209_14012_-	exonuclease DNA polymerase III epsilon subunit	NA	A0A0A7RWA3	Clostridium_phage	30.4	7.6e-33
WP_002342384.1|14074_14917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002331328.1|14932_15154_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_080108108.1|15296_15602_-	site-specific recombinase	NA	A0A2K5B2B4	Erysipelothrix_phage	49.5	3.0e-14
WP_002354485.1|15695_16382_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.6	2.0e-127
WP_002341317.1|17235_17853_-	CadD family cadmium resistance transporter	NA	NA	NA	NA	NA
WP_002341318.1|17869_18232_-	helix-turn-helix transcriptional regulator	NA	E4ZFI8	Streptococcus_phage	43.6	8.4e-16
WP_002329961.1|18540_18750_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002329962.1|18746_18983_+	helix-turn-helix transcriptional regulator	NA	A0A1V0E021	Clostridioides_phage	73.8	7.6e-18
WP_086322655.1|19252_21157_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	35.5	1.0e-99
WP_002342389.1|21354_21588_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA	NA
WP_002320187.1|22574_22913_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002320186.1|23140_23845_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_002292150.1|23989_24562_-	DNA starvation/stationary phase protection protein	NA	A0A0A7RTZ1	Clostridium_phage	42.6	3.9e-23
WP_139439750.1|25097_26288_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	24.6	4.9e-28
WP_002291321.1|27007_27319_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002342391.1|27867_28692_-	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_002342392.1|28904_31067_-	PTS transporter subunit EIIC	NA	A0A2I7SAJ6	Vibrio_phage	41.1	4.3e-06
WP_002291308.1|31347_33642_+	glycoside hydrolase family 65 protein	NA	NA	NA	NA	NA
WP_002342393.1|33634_34300_+	beta-phosphoglucomutase	NA	M1HXP3	Paramecium_bursaria_Chlorella_virus	31.7	1.9e-13
WP_002328396.1|34292_35327_+	galactose mutarotase	NA	NA	NA	NA	NA
WP_086322657.1|38325_39351_-	saccharopine dehydrogenase	NA	NA	NA	NA	NA
WP_002303333.1|40009_40369_+	iron-sulfur cluster biosynthesis family protein	NA	NA	NA	NA	NA
WP_139439751.1|41673_42951_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_047927455.1|42950_45005_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002295662.1|45074_45377_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002305229.1|45394_45637_-	DUF5415 family protein	NA	NA	NA	NA	NA
WP_002310966.1|45633_46098_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002342426.1|46124_48215_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002293489.1|48211_48472_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002342425.1|48484_49240_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002313097.1|49255_50008_-	class C sortase	NA	NA	NA	NA	NA
WP_002342424.1|50022_51999_-	isopeptide-forming domain-containing fimbrial protein	NA	NA	NA	NA	NA
WP_002311526.1|52051_52723_-	class A sortase	NA	NA	NA	NA	NA
WP_002311524.1|53142_53376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311523.1|53567_53858_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311521.1|53876_54218_-	DUF5406 domain-containing protein	NA	F0PIH7	Enterococcus_phage	63.4	3.1e-36
WP_002322486.1|54836_55169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002311519.1|55992_57033_-	replication protein RepA	NA	NA	NA	NA	NA
WP_002290397.1|59322_59577_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_002338111.1|59577_59895_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_128440560.1|61216_62176_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	36.1	1.6e-37
WP_109114464.1|62550_63459_+|transposase	IS982-like element ISEfm1 family transposase	transposase	NA	NA	NA	NA
>prophage 2
NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	154417	73138	114895	154417	bacteriocin,holin,transposase,protease	Enterococcus_phage(21.05%)	57	NA	NA
WP_136653604.1|73138_73819_+|transposase	IS6 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	83.6	1.6e-108
WP_025479643.1|74070_74337_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025477461.1|74341_74506_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002339781.1|74598_74796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002339780.1|75087_75699_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	33.5	2.2e-16
WP_002342403.1|75799_77218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_077495151.1|77558_77693_+	DNA topoisomerase	NA	NA	NA	NA	NA
WP_002342402.1|77932_78526_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086322659.1|78538_79438_+	nucleotidyl transferase AbiEii/AbiGii toxin family protein	NA	NA	NA	NA	NA
WP_002339775.1|79440_79926_+	single-stranded DNA-binding protein	NA	Q938M7	Temperate_phage	60.5	1.4e-42
WP_025479642.1|80025_80271_-|holin	putative holin-like toxin	holin	NA	NA	NA	NA
WP_139439760.1|80345_80606_+	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	50.0	4.5e-11
WP_002293540.1|81050_81257_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002287517.1|81256_81508_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002339840.1|81523_81961_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025477546.1|82180_82381_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086322660.1|82641_83037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293548.1|83086_83293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002307516.1|83302_83536_+	DUF2786 domain-containing protein	NA	NA	NA	NA	NA
WP_002335346.1|83878_84061_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293551.1|84050_84362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002314385.1|85109_85799_-|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	2.9e-126
WP_002290114.1|86021_86693_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_025477426.1|86850_87417_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_139439752.1|87420_87618_+	DUF1971 domain-containing protein	NA	NA	NA	NA	NA
WP_002290112.1|87652_89809_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	57.8	3.0e-241
WP_002290111.1|89818_90772_+	ribonucleotide-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	34.5	6.4e-31
WP_025477519.1|91133_91625_+	thiol peroxidase	NA	NA	NA	NA	NA
WP_002292696.1|91699_92650_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	54.4	7.5e-96
WP_002314385.1|93100_93790_+|transposase	IS6-like element IS1216 family transposase	transposase	A0A1X9I6C6	Streptococcus_phage	99.1	2.9e-126
WP_002293183.1|93982_94114_-|bacteriocin	enterocin L50 family leaderless bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002293184.1|94133_94268_-|bacteriocin	enterocin L50 family leaderless bacteriocin	bacteriocin	NA	NA	NA	NA
WP_002329885.1|94775_95045_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293186.1|95045_95318_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293187.1|95307_95739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002293188.1|95735_97121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002345873.1|97122_97620_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047937082.1|97612_98830_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002293192.1|98826_99510_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.7	8.7e-38
WP_002293193.1|99506_100706_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_047928023.1|101109_101454_-	hypothetical protein	NA	NA	NA	NA	NA
WP_025481242.1|101534_102038_-	XRE family transcriptional regulator	NA	A0A1B2APZ3	Phage_Wrath	54.4	7.6e-39
WP_077940961.1|102000_102237_+	helix-turn-helix transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	52.1	1.5e-13
WP_002293196.1|102473_104588_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	K4FB40	Cronobacter_phage	39.0	1.8e-118
WP_016925871.1|104733_104928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002395927.1|104969_105200_-	hypothetical protein	NA	NA	NA	NA	NA
WP_139439753.1|105285_106411_+|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	54.1	2.3e-75
WP_139439754.1|107136_108263_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	53.4	2.5e-74
WP_100067862.1|108345_108888_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	42.0	2.2e-23
WP_002293180.1|108947_109244_+|bacteriocin	bacteriocin immunity protein	bacteriocin	NA	NA	NA	NA
WP_139439755.1|109302_110472_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_002307506.1|111062_111485_+	cupin domain-containing protein	NA	Q2I8C5	Bacillus_phage	58.5	2.4e-38
WP_002307505.1|111568_112222_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	36.0	5.8e-23
WP_002311027.1|112218_112983_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002318453.1|113057_113171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002342366.1|113384_113627_+	DUF302 domain-containing protein	NA	NA	NA	NA	NA
WP_086956687.1|113732_114895_-|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	51.3	1.6e-79
>prophage 3
NZ_CP040877	Enterococcus faecium strain HB-1 plasmid punnamed, complete sequence	154417	134909	143365	154417	integrase,transposase	Bacillus_phage(33.33%)	7	127292:127307	148046:148061
127292:127307	attL	ATACTAAAGAAACAAC	NA	NA	NA	NA
WP_047937439.1|134909_136181_-	substrate-binding domain-containing protein	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	44.0	1.2e-16
WP_047937438.1|136464_137412_-	glyoxalase	NA	NA	NA	NA	NA
WP_002290382.1|137423_137897_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	44.2	2.3e-13
WP_002290383.1|138069_138624_-|integrase	tyrosine-type recombinase/integrase	integrase	W8CYP1	Bacillus_phage	46.1	8.6e-36
WP_139439757.1|139094_140285_-|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	28.4	5.6e-24
WP_139439758.1|140999_142126_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	54.1	2.3e-75
WP_002329140.1|142405_143365_+|transposase	IS30-like element IS6770 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.9	1.8e-36
148046:148061	attR	GTTGTTTCTTTAGTAT	NA	NA	NA	NA
