assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006337125.1_ASM633712v1	NZ_CP040887	Serinicoccus chungangensis strain CCUG 59777 chromosome, complete genome	1	272466-272554	1	CRISPRCasFinder	no		RT,csa3,cas3,DinG,DEDDh,WYL,cas4	Orphan	GCGCAGCTGACCGTGGAAGTGCGGCCC	27	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	NA|196aa|up_9|NZ_CP040887.1_261623_262211_+,NA|113aa|up_8|NZ_CP040887.1_262274_262613_-,NA|250aa|down_4|NZ_CP040887.1_276812_277562_+,NA|262aa|down_7|NZ_CP040887.1_281946_282732_+,NA|175aa|down_9|NZ_CP040887.1_284141_284666_-	NA|196aa|up_9|NZ_CP040887.1_261623_262211_+	NA	NA|113aa|up_8|NZ_CP040887.1_262274_262613_-	NA	NA|230aa|up_7|NZ_CP040887.1_262623_263313_-	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|360aa|up_6|NZ_CP040887.1_266062_267142_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|488aa|up_5|NZ_CP040887.1_267155_268619_-	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|288aa|up_4|NZ_CP040887.1_268693_269557_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|130aa|up_3|NZ_CP040887.1_269572_269962_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|339aa|up_2|NZ_CP040887.1_270174_271191_-	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|138aa|up_1|NZ_CP040887.1_271250_271664_-	pfam06271, RDD, RDD family	NA|164aa|up_0|NZ_CP040887.1_271943_272435_+	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases	NA|98aa|down_0|NZ_CP040887.1_272589_272883_-	pfam03699, UPF0182, Uncharacterized protein family (UPF0182)	NA|240aa|down_1|NZ_CP040887.1_273025_273745_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|305aa|down_2|NZ_CP040887.1_273737_274652_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|532aa|down_3|NZ_CP040887.1_274738_276334_-	pfam02687, FtsX, FtsX-like permease family	NA|250aa|down_4|NZ_CP040887.1_276812_277562_+	NA	NA|1213aa|down_5|NZ_CP040887.1_277540_281179_-	TIGR03434, ADOP, Acidobacterial duplicated orphan permease	NA|183aa|down_6|NZ_CP040887.1_281401_281950_+	TIGR02983, putative_RNA_polymerase_ECF-subfamily_sigma_factor, RNA polymerase sigma-70 factor, sigma-E family	NA|262aa|down_7|NZ_CP040887.1_281946_282732_+	NA	NA|436aa|down_8|NZ_CP040887.1_282773_284081_-	TIGR02155, Phenylacetate-coenzyme_A_ligase, phenylacetate-CoA ligase	NA|175aa|down_9|NZ_CP040887.1_284141_284666_-	NA
GCF_006337125.1_ASM633712v1	NZ_CP040887	Serinicoccus chungangensis strain CCUG 59777 chromosome, complete genome	2	2200137-2200238	2	CRISPRCasFinder	no		RT,csa3,cas3,DinG,DEDDh,WYL,cas4	Orphan	CGTGTGCAGTCGTGGCCCCAGGAGGGCCA	29	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	NA|145aa|up_9|NZ_CP040887.1_2188070_2188505_+,NA|141aa|down_1|NZ_CP040887.1_2201027_2201450_-,NA|137aa|down_2|NZ_CP040887.1_2201551_2201962_-,NA|68aa|down_4|NZ_CP040887.1_2202373_2202577_-,NA|79aa|down_9|NZ_CP040887.1_2209643_2209880_-	NA|145aa|up_9|NZ_CP040887.1_2188070_2188505_+	NA	NA|159aa|up_8|NZ_CP040887.1_2188488_2188965_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|575aa|up_7|NZ_CP040887.1_2189026_2190751_-	pfam01551, Peptidase_M23, Peptidase family M23	NA|308aa|up_6|NZ_CP040887.1_2190766_2191690_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|232aa|up_5|NZ_CP040887.1_2191686_2192382_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|806aa|up_4|NZ_CP040887.1_2192644_2195062_+	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only]	NA|371aa|up_3|NZ_CP040887.1_2195139_2196252_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|186aa|up_2|NZ_CP040887.1_2196307_2196865_-	pfam04978, DUF664, Protein of unknown function (DUF664)	NA|442aa|up_1|NZ_CP040887.1_2196936_2198262_-	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|503aa|up_0|NZ_CP040887.1_2198378_2199887_-	cd04730, NPD_like, 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites	NA|220aa|down_0|NZ_CP040887.1_2200261_2200921_-	cd07527, HAD_ScGPP-like, subfamily of beta-phosphoglucomutase-like family, similar to Saccharomyces cerevisiae DL-glycerol-3-phosphate phosphatase (GPP1p/ Rhr2p and GPP2p/HOR2p) and 2-deoxyglucose-6-phosphate phosphatase (DOG1p and DOG2p)	NA|141aa|down_1|NZ_CP040887.1_2201027_2201450_-	NA	NA|137aa|down_2|NZ_CP040887.1_2201551_2201962_-	NA	NA|129aa|down_3|NZ_CP040887.1_2201985_2202372_-	COG4961, TadG, Flp pilus assembly protein TadG [Intracellular trafficking and secretion]	NA|68aa|down_4|NZ_CP040887.1_2202373_2202577_-	NA	NA|310aa|down_5|NZ_CP040887.1_2202602_2203532_-	COG2064, TadC, Flp pilus assembly protein TadC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|289aa|down_6|NZ_CP040887.1_2203528_2204395_-	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|411aa|down_7|NZ_CP040887.1_2204394_2205627_-	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]	NA|1267aa|down_8|NZ_CP040887.1_2205836_2209637_+	TIGR03928, T7_EssCb_Firm, type VII secretion protein EssC, C-terminal domain	NA|79aa|down_9|NZ_CP040887.1_2209643_2209880_-	NA
GCF_006337125.1_ASM633712v1	NZ_CP040887	Serinicoccus chungangensis strain CCUG 59777 chromosome, complete genome	3	2513008-2513140	3	CRISPRCasFinder	no	WYL	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	Unclear	GGCCCGTCGGCGCCGGGGCCGGCCG	25	0	0	NA	NA	NA	2	2	Orphan	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	NA|295aa|up_9|NZ_CP040887.1_2505325_2506210_-,NA|147aa|up_5|NZ_CP040887.1_2509516_2509957_-,NA|228aa|down_6|NZ_CP040887.1_2520714_2521398_-	NA|295aa|up_9|NZ_CP040887.1_2505325_2506210_-	NA	NA|317aa|up_8|NZ_CP040887.1_2506206_2507157_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|349aa|up_7|NZ_CP040887.1_2507228_2508275_+	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|223aa|up_6|NZ_CP040887.1_2508666_2509335_+	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|147aa|up_5|NZ_CP040887.1_2509516_2509957_-	NA	NA|361aa|up_4|NZ_CP040887.1_2510026_2511109_-	PRK13903, murB, UDP-N-acetylmuramate dehydrogenase	NA|135aa|up_3|NZ_CP040887.1_2511198_2511603_-	cd03453, SAV4209_like, SAV4209_like	NA|149aa|up_2|NZ_CP040887.1_2511602_2512049_-	pfam13452, MaoC_dehydrat_N, N-terminal half of MaoC dehydratase	NA|56aa|up_1|NZ_CP040887.1_2512156_2512324_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|109aa|up_0|NZ_CP040887.1_2512664_2512991_-	pfam01575, MaoC_dehydratas, MaoC like domain	NA|474aa|down_0|NZ_CP040887.1_2513623_2515045_-	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional	NA|429aa|down_1|NZ_CP040887.1_2515046_2516333_-	PRK09268, PRK09268, acetyl-CoA C-acetyltransferase	NA|225aa|down_2|NZ_CP040887.1_2516421_2517096_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|682aa|down_3|NZ_CP040887.1_2517092_2519138_+	cd01150, AXO, Peroxisomal acyl-CoA oxidase	NA|189aa|down_4|NZ_CP040887.1_2519143_2519710_-	pfam12867, DinB_2, DinB superfamily	WYL|325aa|down_5|NZ_CP040887.1_2519770_2520745_+	COG2378, COG2378, Predicted transcriptional regulator [Transcription]	NA|228aa|down_6|NZ_CP040887.1_2520714_2521398_-	NA	NA|302aa|down_7|NZ_CP040887.1_2521394_2522300_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|126aa|down_8|NZ_CP040887.1_2522299_2522677_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|241aa|down_9|NZ_CP040887.1_2522766_2523489_-	cd06259, YdcF-like, YdcF-like
GCF_006337125.1_ASM633712v1	NZ_CP040887	Serinicoccus chungangensis strain CCUG 59777 chromosome, complete genome	4	2561841-2561905	4	CRISPRCasFinder	no		RT,csa3,cas3,DinG,DEDDh,WYL,cas4	Orphan	GAGGTGGCCCAGGGCGAGGAGGA	23	1	5	2561864-2561882|2561864-2561882|2561864-2561882|2561864-2561882|2561864-2561882	NZ_CP040887.1_579493-579475|NZ_CP040887.1_59816-59834|NZ_CP040887.1_393464-393446|NZ_CP040887.1_2198155-2198137|NZ_CP040887.1_2575871-2575853	NA	1	1	Orphan	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	NA,NA|332aa|down_0|NZ_CP040887.1_2564098_2565094_-	NA|498aa|up_9|NZ_CP040887.1_2551266_2552760_-	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family	NA|250aa|up_8|NZ_CP040887.1_2552832_2553582_-	COG3001, COG3001, Uncharacterized protein conserved in bacteria [Function unknown]	NA|169aa|up_7|NZ_CP040887.1_2553623_2554130_+	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|266aa|up_6|NZ_CP040887.1_2554132_2554930_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|365aa|up_5|NZ_CP040887.1_2555001_2556096_+	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|107aa|up_4|NZ_CP040887.1_2556133_2556454_+	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family	NA|632aa|up_3|NZ_CP040887.1_2556515_2558411_+	TIGR03710, OAFO_sf, 2-oxoacid:acceptor oxidoreductase, alpha subunit	NA|404aa|up_2|NZ_CP040887.1_2558407_2559619_+	PRK11867, PRK11867, 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	NA|324aa|up_1|NZ_CP040887.1_2559628_2560600_+	COG2962, RarD, Predicted permeases [General function prediction only]	NA|223aa|up_0|NZ_CP040887.1_2560664_2561333_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|332aa|down_0|NZ_CP040887.1_2564098_2565094_-	NA	NA|658aa|down_1|NZ_CP040887.1_2565278_2567252_+	COG3211, PhoX, Predicted phosphatase [General function prediction only]	NA|336aa|down_2|NZ_CP040887.1_2567324_2568332_-	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism]	NA|516aa|down_3|NZ_CP040887.1_2568328_2569876_-	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN	NA|519aa|down_4|NZ_CP040887.1_2569875_2571432_-	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed	NA|659aa|down_5|NZ_CP040887.1_2571431_2573408_-	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed	NA|100aa|down_6|NZ_CP040887.1_2573423_2573723_-	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK	NA|291aa|down_7|NZ_CP040887.1_2573722_2574595_-	PRK06638, PRK06638, NADH-quinone oxidoreductase subunit J	NA|237aa|down_8|NZ_CP040887.1_2574591_2575302_-	PRK05888, PRK05888, NADH-quinone oxidoreductase subunit NuoI	NA|477aa|down_9|NZ_CP040887.1_2575294_2576725_-	PRK06076, PRK06076, NADH-quinone oxidoreductase subunit NuoH
GCF_006337125.1_ASM633712v1	NZ_CP040887	Serinicoccus chungangensis strain CCUG 59777 chromosome, complete genome	5	2590996-2591089	5	CRISPRCasFinder	no	DEDDh	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	Unclear	CAGGTCAGCTGACGGCCCCCTCGAC	25	0	0	NA	NA	NA	1	1	Orphan	RT,csa3,cas3,DinG,DEDDh,WYL,cas4	NA,NA|99aa|down_8|NZ_CP040887.1_2604312_2604609_-	NA|438aa|up_9|NZ_CP040887.1_2579261_2580575_-	TIGR01959, NADH-quinone_oxidoreductase_subunit_F, NADH-quinone oxidoreductase, F subunit	NA|307aa|up_8|NZ_CP040887.1_2580571_2581492_-	PRK07539, PRK07539, NADH-quinone oxidoreductase subunit NuoE	NA|473aa|up_7|NZ_CP040887.1_2581515_2582934_-	PRK06075, PRK06075, NADH-quinone oxidoreductase subunit D	NA|261aa|up_6|NZ_CP040887.1_2582933_2583716_-	PRK07785, PRK07785, NADH dehydrogenase subunit C; Provisional	NA|185aa|up_5|NZ_CP040887.1_2583760_2584315_-	PRK06411, PRK06411, NADH-quinone oxidoreductase subunit NuoB	NA|122aa|up_4|NZ_CP040887.1_2584338_2584704_-	PRK07928, PRK07928, NADH dehydrogenase subunit A; Validated	NA|440aa|up_3|NZ_CP040887.1_2584789_2586109_-	TIGR02032, Uncharacterized_protein_MJ1520, geranylgeranyl reductase family	DEDDh|240aa|up_2|NZ_CP040887.1_2586222_2586942_-	PRK09146, PRK09146, DNA polymerase III subunit epsilon; Validated	NA|617aa|up_1|NZ_CP040887.1_2586941_2588792_-	COG2905, COG2905, Predicted signal-transduction protein containing cAMP-binding and CBS domains [Signal transduction mechanisms]	NA|445aa|up_0|NZ_CP040887.1_2589620_2590955_+	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|167aa|down_0|NZ_CP040887.1_2591177_2591678_-	COG3981, COG3981, Predicted acetyltransferase [General function prediction only]	NA|441aa|down_1|NZ_CP040887.1_2591677_2593000_-	cd17393, MFS_MosC_like, Membrane protein MosC and similar proteins of the Major Facilitator Superfamily of transporters	NA|438aa|down_2|NZ_CP040887.1_2593071_2594385_+	PRK01346, PRK01346, enhanced intracellular survival protein Eis	NA|579aa|down_3|NZ_CP040887.1_2594467_2596204_-	PRK07449, PRK07449, 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	NA|500aa|down_4|NZ_CP040887.1_2596282_2597782_+	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases	NA|547aa|down_5|NZ_CP040887.1_2598391_2600032_+	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|714aa|down_6|NZ_CP040887.1_2600028_2602170_+	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|661aa|down_7|NZ_CP040887.1_2602200_2604183_-	COG3590, PepO, Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones]	NA|99aa|down_8|NZ_CP040887.1_2604312_2604609_-	NA	NA|155aa|down_9|NZ_CP040887.1_2604776_2605241_-	cd04688, Nudix_Hydrolase_29, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X
