assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006337065.1_ASM633706v1	NZ_CP040872	Agromyces sp. HY052 chromosome, complete genome	1	81749-81849	1	CRISPRCasFinder	no	csa3	csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	Type I-A	CGTCAGCCTCTACGACCGGCCCTCAACCGATTCC	34	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	NA|132aa|up_8|NZ_CP040872.1_74044_74440_-,NA|84aa|up_5|NZ_CP040872.1_76463_76715_+,NA|459aa|down_2|NZ_CP040872.1_82957_84334_-,NA|77aa|down_4|NZ_CP040872.1_85081_85312_-	NA|223aa|up_9|NZ_CP040872.1_73345_74014_+	COG0569, TrkA, K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]	NA|132aa|up_8|NZ_CP040872.1_74044_74440_-	NA	NA|193aa|up_7|NZ_CP040872.1_74624_75203_-	pfam04167, DUF402, Protein of unknown function (DUF402)	NA|375aa|up_6|NZ_CP040872.1_75236_76361_+	PRK03522, rumB, 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA|84aa|up_5|NZ_CP040872.1_76463_76715_+	NA	NA|284aa|up_4|NZ_CP040872.1_76880_77732_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|321aa|up_3|NZ_CP040872.1_77811_78774_+	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|147aa|up_2|NZ_CP040872.1_78939_79380_-	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis]	NA|212aa|up_1|NZ_CP040872.1_79452_80088_+	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|285aa|up_0|NZ_CP040872.1_80584_81439_+	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators	NA|148aa|down_0|NZ_CP040872.1_81912_82356_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|98aa|down_1|NZ_CP040872.1_82701_82995_-	pfam14542, Acetyltransf_CG, GCN5-related N-acetyl-transferase	NA|459aa|down_2|NZ_CP040872.1_82957_84334_-	NA	NA|127aa|down_3|NZ_CP040872.1_84602_84983_-	pfam04237, YjbR, YjbR	NA|77aa|down_4|NZ_CP040872.1_85081_85312_-	NA	NA|89aa|down_5|NZ_CP040872.1_85934_86201_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|326aa|down_6|NZ_CP040872.1_86213_87191_+	COG3569, COG3569, Topoisomerase IB [DNA replication, recombination, and repair]	NA|828aa|down_7|NZ_CP040872.1_87231_89715_-	PRK09632, PRK09632, ATP-dependent DNA ligase; Reviewed	NA|319aa|down_8|NZ_CP040872.1_89799_90756_+	cd00789, KU_like, Ku-core domain, Ku-like subfamily; composed of prokaryotic homologs of the eukaryotic DNA binding protein Ku	NA|147aa|down_9|NZ_CP040872.1_90837_91278_-	cd06307, PBP1_sugar_binding, periplasmic sugar-binding domain of uncharacterized transport systems
GCF_006337065.1_ASM633706v1	NZ_CP040872	Agromyces sp. HY052 chromosome, complete genome	2	2426965-2427053	2	CRISPRCasFinder	no		csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	Orphan	GCATGTTCTAGACCACCATTCCG	23	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	NA|69aa|up_9|NZ_CP040872.1_2413700_2413907_+,NA|117aa|down_8|NZ_CP040872.1_2434007_2434358_+	NA|69aa|up_9|NZ_CP040872.1_2413700_2413907_+	NA	NA|435aa|up_8|NZ_CP040872.1_2414043_2415348_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|202aa|up_7|NZ_CP040872.1_2415454_2416060_+	pfam16264, SatD, SatD family (SatD)	NA|206aa|up_6|NZ_CP040872.1_2416672_2417290_-	PRK00802, PRK00802, DNA-3-methyladenine glycosylase	NA|492aa|up_5|NZ_CP040872.1_2417286_2418762_-	PRK00855, PRK00855, argininosuccinate lyase; Provisional	NA|310aa|up_4|NZ_CP040872.1_2418761_2419691_-	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional	NA|407aa|up_3|NZ_CP040872.1_2419687_2420908_-	PRK03244, argD, acetylornithine transaminase	NA|306aa|up_2|NZ_CP040872.1_2420904_2421822_-	PRK00942, PRK00942, acetylglutamate kinase; Provisional	NA|386aa|up_1|NZ_CP040872.1_2421824_2422982_-	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA|348aa|up_0|NZ_CP040872.1_2422978_2424022_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|309aa|down_0|NZ_CP040872.1_2428130_2429057_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|216aa|down_1|NZ_CP040872.1_2429053_2429701_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|289aa|down_2|NZ_CP040872.1_2429771_2430638_-	cd13690, PBP2_GluB, Substrate binding domain of ABC glutamate transporter; the type 2 periplasmic binding protein fold	NA|263aa|down_3|NZ_CP040872.1_2430706_2431495_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|271aa|down_4|NZ_CP040872.1_2431551_2432364_-	COG0566, SpoU, rRNA methylases [Translation, ribosomal structure and biogenesis]	NA|129aa|down_5|NZ_CP040872.1_2432455_2432842_-	PRK05185, rplT, 50S ribosomal protein L20; Provisional	NA|65aa|down_6|NZ_CP040872.1_2432873_2433068_-	PRK00172, rpmI, 50S ribosomal protein L35; Reviewed	NA|207aa|down_7|NZ_CP040872.1_2433123_2433744_-	PRK00028, infC, translation initiation factor IF-3; Reviewed	NA|117aa|down_8|NZ_CP040872.1_2434007_2434358_+	NA	NA|259aa|down_9|NZ_CP040872.1_2434370_2435147_-	COG0266, Nei, Formamidopyrimidine-DNA glycosylase [DNA replication, recombination, and repair]
GCF_006337065.1_ASM633706v1	NZ_CP040872	Agromyces sp. HY052 chromosome, complete genome	3	2566249-2566334	3	CRISPRCasFinder	no		csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	Orphan	CTCGAGAACGGGTTGTTGCCCGGGCG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	NA,NA|240aa|down_4|NZ_CP040872.1_2571672_2572392_-,NA|143aa|down_6|NZ_CP040872.1_2573708_2574137_-	NA|231aa|up_9|NZ_CP040872.1_2554257_2554950_+	cd03224, ABC_TM1139_LivF_branched, ATP-binding cassette domain of branched-chain amino acid transporter	NA|416aa|up_8|NZ_CP040872.1_2555048_2556296_+	cd06327, PBP1_SBP-like, periplasmic substrate-binding domain of active transport proteins (substrate binding proteins or SBPs)	NA|290aa|up_7|NZ_CP040872.1_2556364_2557234_+	cd06582, TM_PBP1_LivH_like, Transmembrane subunit (TM) of Escherichia coli LivH and related proteins	NA|343aa|up_6|NZ_CP040872.1_2557230_2558259_+	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins	NA|332aa|up_5|NZ_CP040872.1_2558294_2559290_+	PRK06522, PRK06522, 2-dehydropantoate 2-reductase; Reviewed	NA|321aa|up_4|NZ_CP040872.1_2559339_2560302_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|433aa|up_3|NZ_CP040872.1_2560394_2561693_-	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain	NA|201aa|up_2|NZ_CP040872.1_2561966_2562569_-	PRK06696, PRK06696, uridine kinase; Validated	NA|297aa|up_1|NZ_CP040872.1_2562618_2563509_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|159aa|up_0|NZ_CP040872.1_2563509_2563986_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|88aa|down_0|NZ_CP040872.1_2566936_2567200_-	pfam04296, DUF448, Protein of unknown function (DUF448)	NA|333aa|down_1|NZ_CP040872.1_2567278_2568277_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|64aa|down_2|NZ_CP040872.1_2570205_2570397_-	pfam04147, Nop14, Nop14-like family	NA|377aa|down_3|NZ_CP040872.1_2570471_2571602_-	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	NA|240aa|down_4|NZ_CP040872.1_2571672_2572392_-	NA	NA|245aa|down_5|NZ_CP040872.1_2572953_2573688_-	pfam11253, DUF3052, Protein of unknown function (DUF3052)	NA|143aa|down_6|NZ_CP040872.1_2573708_2574137_-	NA	NA|350aa|down_7|NZ_CP040872.1_2574308_2575358_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|207aa|down_8|NZ_CP040872.1_2575370_2575991_-	TIGR02428, 3-oxoadipate_CoA-transferase_subunit_B, 3-oxoacid CoA-transferase, B subunit	NA|258aa|down_9|NZ_CP040872.1_2576013_2576787_-	COG1788, AtoD, Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit [Lipid metabolism]
GCF_006337065.1_ASM633706v1	NZ_CP040872	Agromyces sp. HY052 chromosome, complete genome	4	2779551-2779628	4	CRISPRCasFinder	no		csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	Orphan	CGCGCGCACGCGCGCCTTCCGCGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,DinG,cas3,DEDDh,Cas9_archaeal	NA|134aa|up_2|NZ_CP040872.1_2777735_2778137_-,NA|150aa|up_1|NZ_CP040872.1_2778133_2778583_-,NA|160aa|down_7|NZ_CP040872.1_2789421_2789901_-,NA|96aa|down_8|NZ_CP040872.1_2790006_2790294_+	NA|366aa|up_9|NZ_CP040872.1_2769239_2770337_-	PRK13007, PRK13007, succinyl-diaminopimelate desuccinylase; Reviewed	NA|215aa|up_8|NZ_CP040872.1_2770371_2771016_+	pfam06736, DUF1211, Protein of unknown function (DUF1211)	NA|322aa|up_7|NZ_CP040872.1_2771082_2772048_+	TIGR03535, DapD_actino, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA|851aa|up_6|NZ_CP040872.1_2772229_2774782_+	pfam01804, Penicil_amidase, Penicillin amidase	NA|433aa|up_5|NZ_CP040872.1_2774766_2776065_-	PRK05614, gltA, citrate synthase	NA|372aa|up_4|NZ_CP040872.1_2776259_2777375_-	PRK07865, PRK07865, N-succinyldiaminopimelate aminotransferase; Reviewed	NA|107aa|up_3|NZ_CP040872.1_2777377_2777698_-	COG1146, COG1146, Ferredoxin [Energy production and conversion]	NA|134aa|up_2|NZ_CP040872.1_2777735_2778137_-	NA	NA|150aa|up_1|NZ_CP040872.1_2778133_2778583_-	NA	NA|270aa|up_0|NZ_CP040872.1_2778736_2779546_+	PRK05809, PRK05809, short-chain-enoyl-CoA hydratase	NA|231aa|down_0|NZ_CP040872.1_2779843_2780536_-	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|635aa|down_1|NZ_CP040872.1_2780926_2782831_-	COG1217, TypA, Predicted membrane GTPase involved in stress response [Signal transduction mechanisms]	NA|589aa|down_2|NZ_CP040872.1_2783065_2784832_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|318aa|down_3|NZ_CP040872.1_2784828_2785782_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|310aa|down_4|NZ_CP040872.1_2785771_2786701_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|541aa|down_5|NZ_CP040872.1_2786882_2788505_-	cd00995, PBP2_NikA_DppA_OppA_like, The substrate-binding domain of an ABC-type nickel/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|255aa|down_6|NZ_CP040872.1_2788711_2789476_+	pfam02517, Abi, CAAX protease self-immunity	NA|160aa|down_7|NZ_CP040872.1_2789421_2789901_-	NA	NA|96aa|down_8|NZ_CP040872.1_2790006_2790294_+	NA	NA|963aa|down_9|NZ_CP040872.1_2790316_2793205_-	PRK05367, PRK05367, aminomethyl-transferring glycine dehydrogenase
