The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040829	Paenibacillus polymyxa strain ZF129 chromosome, complete genome	5703931	533244	558215	5703931	holin,plate,tail,portal	Bacillus_phage(38.89%)	23	NA	NA
WP_126666102.1|533244_537735_+	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	26.8	2.4e-91
WP_126666101.1|537915_538881_-	glycoside hydrolase family 25 protein	NA	D0R7H8	Paenibacillus_phage	49.8	6.5e-55
WP_016821295.1|539033_539480_-|holin	phage holin family protein	holin	R9TMD4	Paenibacillus_phage	62.2	8.7e-39
WP_126666100.1|539565_539832_-	hypothetical protein	NA	NA	NA	NA	NA
WP_117288560.1|539890_540502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_117288559.1|540517_543037_-	hypothetical protein	NA	A0A0A0RMM9	Bacillus_phage	26.3	3.2e-13
WP_117288558.1|543038_543713_-	YmfQ family protein	NA	A0A0A7RTU9	Clostridium_phage	43.8	2.8e-28
WP_117288557.1|543705_544857_-|plate	baseplate J/gp47 family protein	plate	S6AVU3	Thermus_phage	34.9	2.4e-40
WP_117288556.1|544856_545327_-	DUF2634 domain-containing protein	NA	A0A0N7ACH4	Bacillus_phage	38.6	2.0e-25
WP_017426416.1|545313_545721_-	hypothetical protein	NA	A0A0N7ACD3	Bacillus_phage	32.3	3.9e-09
WP_102998618.1|545713_546691_-|portal	phage portal protein	portal	A0A0N6W8H4	Bacillus_phage	47.7	1.9e-78
WP_025364227.1|546687_547329_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A0N7ACF7	Bacillus_phage	52.3	2.9e-43
WP_117288554.1|547345_549226_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_007429164.1|549398_549833_-	hypothetical protein	NA	A0A2H4J883	uncultured_Caudovirales_phage	42.0	1.8e-20
WP_016821317.1|549933_550341_-|tail	phage tail tube protein	tail	A0A2H4J032	uncultured_Caudovirales_phage	61.8	1.5e-40
WP_126666099.1|550463_551930_-|tail	phage tail sheath protein	tail	A0A0N7AEC6	Bacillus_phage	35.8	1.4e-72
WP_016821321.1|551932_552151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_126666098.1|552161_553022_-	hypothetical protein	NA	NA	NA	NA	NA
WP_126666097.1|553474_554329_-	aminoglycoside 6-adenylyltransferase	NA	E4ZFP8	Streptococcus_phage	54.3	1.9e-90
WP_090888190.1|554447_554924_-	transcriptional regulator	NA	A0A0C5AJ96	Bacteriophage	62.7	5.3e-42
WP_013369769.1|555199_555673_+	helix-turn-helix domain-containing protein	NA	S6C481	Thermus_phage	39.7	3.7e-19
WP_126666096.1|555684_556110_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0S2SXM3	Bacillus_phage	38.0	6.9e-17
WP_126666095.1|556304_558215_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2P1CFA9	Microbacterium_phage	57.8	1.2e-07
>prophage 2
NZ_CP040829	Paenibacillus polymyxa strain ZF129 chromosome, complete genome	5703931	935252	944473	5703931		Mollivirus(33.33%)	7	NA	NA
WP_126666017.1|935252_936293_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	46.1	1.2e-70
WP_126666016.1|937009_938491_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.5	2.1e-52
WP_017426171.1|938475_940719_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	42.4	8.0e-165
WP_016819768.1|940696_941386_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_007428837.1|941390_941636_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	A0A0E3FJ99	Synechococcus_phage	37.7	1.4e-06
WP_016819767.1|941694_942576_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	35.3	4.4e-42
WP_031462891.1|943174_944473_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.1	7.0e-20
>prophage 3
NZ_CP040829	Paenibacillus polymyxa strain ZF129 chromosome, complete genome	5703931	2525972	2534419	5703931		Enterobacteria_phage(50.0%)	8	NA	NA
WP_126666380.1|2525972_2527349_+	mannose-1-phosphate guanylyltransferase	NA	A0A1V0SH58	Hokovirus	28.8	4.8e-43
WP_126666379.1|2527368_2528112_+	NTP transferase domain-containing protein	NA	I7I009	Enterobacteria_phage	47.1	5.5e-54
WP_126666378.1|2528135_2528684_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	46.3	2.2e-39
WP_126666377.1|2528796_2529816_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	47.6	2.1e-80
WP_126666376.1|2529817_2530681_+	dTDP-4-dehydrorhamnose reductase	NA	A0A140G5S3	Enterobacteria_phage	37.3	7.9e-36
WP_126666468.1|2530774_2531155_+	GtrA family protein	NA	NA	NA	NA	NA
WP_139625363.1|2531166_2533389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_126666374.1|2533441_2534419_+	glycosyltransferase family 2 protein	NA	U5P087	Shigella_phage	50.7	5.0e-79
>prophage 4
NZ_CP040829	Paenibacillus polymyxa strain ZF129 chromosome, complete genome	5703931	4243683	4250878	5703931		Staphylococcus_phage(50.0%)	9	NA	NA
WP_016822244.1|4243683_4244349_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	40.9	1.0e-38
WP_038978072.1|4244462_4245107_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	55.7	1.1e-58
WP_025366264.1|4245136_4245601_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	59.2	7.4e-41
WP_017427525.1|4245774_4246569_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	30.5	3.7e-08
WP_019687880.1|4246537_4247146_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	33.3	1.1e-15
WP_102999122.1|4247288_4248002_+	DUF2953 domain-containing protein	NA	NA	NA	NA	NA
WP_016822238.1|4248100_4248589_+	sporulation protein YtfJ	NA	NA	NA	NA	NA
WP_044785218.1|4248680_4249403_-	hypothetical protein	NA	NA	NA	NA	NA
WP_102999121.1|4249615_4250878_+	D-alanyl-D-alanine carboxypeptidase	NA	A0A1P8VVG5	Erythrobacter_phage	32.9	2.3e-07
>prophage 5
NZ_CP040829	Paenibacillus polymyxa strain ZF129 chromosome, complete genome	5703931	4620275	4628067	5703931		Bacillus_virus(33.33%)	8	NA	NA
WP_017427017.1|4620275_4621181_+	NUDIX hydrolase	NA	G3MA14	Bacillus_virus	33.8	2.4e-35
WP_016820795.1|4621211_4621694_+	NADAR family protein	NA	A0A0S0N9W6	Pseudomonas_phage	56.1	8.3e-43
WP_126666514.1|4621699_4622599_+	TIGR02452 family protein	NA	G3MBH6	Bacillus_virus	46.2	2.6e-58
WP_126666513.1|4622648_4623251_+	adenylyl-sulfate kinase	NA	NA	NA	NA	NA
WP_017427013.1|4623539_4624997_+	catalase	NA	A0A2K9L0T1	Tupanvirus	43.0	2.7e-113
WP_126666512.1|4625118_4626429_-	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_126666511.1|4626395_4627238_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.5	1.1e-13
WP_126666510.1|4627230_4628067_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.9	2.5e-18
>prophage 6
NZ_CP040829	Paenibacillus polymyxa strain ZF129 chromosome, complete genome	5703931	5688162	5698854	5703931	transposase	Bacillus_phage(42.86%)	8	NA	NA
WP_016819637.1|5688162_5690817_-	DNA polymerase I	NA	A0A060AM05	Listeria_phage	29.8	2.3e-46
WP_016819636.1|5690992_5691652_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_016819635.1|5691692_5692451_-	phosphate ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.4	1.5e-14
WP_123797044.1|5692578_5693703_-	CBS domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	26.9	4.1e-08
WP_013370356.1|5693860_5694592_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.5	3.5e-37
WP_126665818.1|5694720_5696523_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	36.3	3.5e-38
WP_126667025.1|5696666_5697811_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	62.6	7.7e-39
WP_016819632.1|5697933_5698854_-	glucose 1-dehydrogenase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	41.8	3.4e-53
