assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006274235.1_ASM627423v1	NZ_CP040848	Pasteurella multocida strain EB104 chromosome, complete genome	1	209089-209956	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3-cas2,cas1,cas6f,cas7f,cas5f	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Unclear	TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC,TTTCTAAGCCATCTACACGATGGTGAAC	28,28,28	0	0	NA	NA	NA:NA:NA	14,14,14	14	Unclear	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|197aa|up_3|NZ_CP040848.1_201992_202583_-,NA|604aa|down_3|NZ_CP040848.1_212738_214550_+,NA|78aa|down_4|NZ_CP040848.1_217487_217721_+,NA|219aa|down_7|NZ_CP040848.1_222576_223233_+,NA|75aa|down_8|NZ_CP040848.1_224918_225143_-	NA|108aa|up_9|NZ_CP040848.1_197379_197703_-	TIGR02011, Protein_yfhF	NA|129aa|up_8|NZ_CP040848.1_197772_198159_-	PRK11325, PRK11325, scaffold protein; Provisional	NA|405aa|up_7|NZ_CP040848.1_198390_199605_-	PRK14012, PRK14012, IscS subfamily cysteine desulfurase	NA|155aa|up_6|NZ_CP040848.1_199652_200117_-	TIGR02010, Putative_HTH-type_transcriptional_regulator, iron-sulfur cluster assembly transcription factor IscR	NA|239aa|up_5|NZ_CP040848.1_200195_200912_-	COG0565, LasT, rRNA methylase [Translation, ribosomal structure and biogenesis]	NA|268aa|up_4|NZ_CP040848.1_201125_201929_+	PRK10757, PRK10757, inositol-1-monophosphatase	NA|197aa|up_3|NZ_CP040848.1_201992_202583_-	NA	NA|619aa|up_2|NZ_CP040848.1_202723_204580_-	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional	cas3-cas2|1107aa|up_1|NZ_CP040848.1_204637_207958_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|327aa|up_0|NZ_CP040848.1_207938_208919_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	cas6f|187aa|down_0|NZ_CP040848.1_210096_210657_-	TIGR02563, conserved_hypothetical_protein, CRISPR-associated endoribonuclease Cas6/Csy4, subtype I-F/YPEST	cas7f|336aa|down_1|NZ_CP040848.1_210659_211667_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|321aa|down_2|NZ_CP040848.1_211669_212632_-	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	NA|604aa|down_3|NZ_CP040848.1_212738_214550_+	NA	NA|78aa|down_4|NZ_CP040848.1_217487_217721_+	NA	NA|198aa|down_5|NZ_CP040848.1_219530_220124_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|402aa|down_6|NZ_CP040848.1_220236_221442_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|219aa|down_7|NZ_CP040848.1_222576_223233_+	NA	NA|75aa|down_8|NZ_CP040848.1_224918_225143_-	NA	NA|373aa|down_9|NZ_CP040848.1_226677_227796_-	pfam06527, TniQ, TniQ
GCF_006274235.1_ASM627423v1	NZ_CP040848	Pasteurella multocida strain EB104 chromosome, complete genome	2	231223-231375	2	CRISPRCasFinder	no	cas5f,cas8f	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Type I-F	TTATGACATTTATTTCTGGTTTTTA	25	0	0	NA	NA	NA	2	2	TypeI-F	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|604aa|up_7|NZ_CP040848.1_212738_214550_+,NA|78aa|up_6|NZ_CP040848.1_217487_217721_+,NA|219aa|up_3|NZ_CP040848.1_222576_223233_+,NA|75aa|up_2|NZ_CP040848.1_224918_225143_-,NA|88aa|down_8|NZ_CP040848.1_244216_244480_+,NA|282aa|down_9|NZ_CP040848.1_250354_251200_+	cas7f|336aa|up_9|NZ_CP040848.1_210659_211667_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|321aa|up_8|NZ_CP040848.1_211669_212632_-	TIGR02565, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy2	NA|604aa|up_7|NZ_CP040848.1_212738_214550_+	NA	NA|78aa|up_6|NZ_CP040848.1_217487_217721_+	NA	NA|198aa|up_5|NZ_CP040848.1_219530_220124_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|402aa|up_4|NZ_CP040848.1_220236_221442_-	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters	NA|219aa|up_3|NZ_CP040848.1_222576_223233_+	NA	NA|75aa|up_2|NZ_CP040848.1_224918_225143_-	NA	NA|373aa|up_1|NZ_CP040848.1_226677_227796_-	pfam06527, TniQ, TniQ	NA|221aa|up_0|NZ_CP040848.1_230555_231218_-	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	cas8f|445aa|down_0|NZ_CP040848.1_231409_232744_-	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	NA|720aa|down_1|NZ_CP040848.1_232974_235134_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|683aa|down_2|NZ_CP040848.1_235267_237316_-	PRK00133, metG, methionyl-tRNA synthetase; Reviewed	NA|371aa|down_3|NZ_CP040848.1_237497_238610_+	PRK11670, PRK11670, iron-sulfur cluster carrier protein ApbC	NA|90aa|down_4|NZ_CP040848.1_238748_239018_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|968aa|down_5|NZ_CP040848.1_239184_242088_-	TIGR01786, hemoglobin-haptoglobin-binding_protein, TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein	NA|172aa|down_6|NZ_CP040848.1_242129_242645_-	TIGR04110, hypothetical_protein_VSWAT3_12502, heme utilization protein HutZ	NA|164aa|down_7|NZ_CP040848.1_242660_243152_-	COG3721, HugX, Putative heme iron utilization protein [Inorganic ion transport and metabolism]	NA|88aa|down_8|NZ_CP040848.1_244216_244480_+	NA	NA|282aa|down_9|NZ_CP040848.1_250354_251200_+	NA
GCF_006274235.1_ASM627423v1	NZ_CP040848	Pasteurella multocida strain EB104 chromosome, complete genome	3	765723-767070	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Unclear	TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC,TTTCTAAGCTGCCTATACGGCAGTTAAC	28,28,28	3	3	766831-766862|766891-766922|766951-766982	NZ_CP040848.1_1000000-999969|NZ_CP040848.1_889639-889608|NZ_CP040848.1_1636742-1636711	I-F:I-F:I-F	22,22,21	22	Unclear	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA,NA	NA|529aa|up_9|NZ_CP040848.1_753829_755416_-	COG1620, LldP, L-lactate permease [Energy production and conversion]	NA|456aa|up_8|NZ_CP040848.1_755774_757142_-	PRK09285, PRK09285, adenylosuccinate lyase; Provisional	NA|204aa|up_7|NZ_CP040848.1_757169_757781_-	COG2915, COG2915, Uncharacterized protein involved in purine metabolism [General function prediction only]	NA|309aa|up_6|NZ_CP040848.1_757966_758893_+	PRK09434, PRK09434, aminoimidazole riboside kinase; Provisional	NA|481aa|up_5|NZ_CP040848.1_758930_760373_+	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|340aa|up_4|NZ_CP040848.1_760398_761418_+	TIGR02417, Fructose_repressor_Catabolite_repressor/activator	NA|475aa|up_3|NZ_CP040848.1_761646_763071_+	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component	NA|136aa|up_2|NZ_CP040848.1_763186_763594_+	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and    metabolism]	NA|349aa|up_1|NZ_CP040848.1_763662_764709_+	PRK10916, PRK10916, ADP-heptose--LPS heptosyltransferase RfaF	NA|322aa|up_0|NZ_CP040848.1_764705_765671_+	PRK10964, PRK10964, lipopolysaccharide heptosyltransferase RfaC	cas3|443aa|down_0|NZ_CP040848.1_767217_768546_-	PRK11192, PRK11192, ATP-dependent RNA helicase SrmB; Provisional	NA|238aa|down_1|NZ_CP040848.1_768657_769371_+	COG4123, COG4123, Predicted O-methyltransferase [General function prediction only]	NA|235aa|down_2|NZ_CP040848.1_769418_770123_-	COG3201, PnuC, Nicotinamide mononucleotide transporter [Coenzyme metabolism]	NA|968aa|down_3|NZ_CP040848.1_770398_773302_+	PRK04914, PRK04914, RNA polymerase-associated protein RapA	NA|220aa|down_4|NZ_CP040848.1_773382_774042_+	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	NA|190aa|down_5|NZ_CP040848.1_774105_774675_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|143aa|down_6|NZ_CP040848.1_774680_775109_+	pfam10675, DUF2489, Protein of unknown function (DUF2489)	NA|456aa|down_7|NZ_CP040848.1_775132_776500_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|223aa|down_8|NZ_CP040848.1_776540_777209_+	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB	NA|112aa|down_9|NZ_CP040848.1_777304_777640_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_006274235.1_ASM627423v1	NZ_CP040848	Pasteurella multocida strain EB104 chromosome, complete genome	4	1092446-1092598	4	CRISPRCasFinder	no		cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	Orphan	TAAAAACTAGAAATAAATGTCATAA	25	0	0	NA	NA	NA	2	2	Orphan	cas3-cas2,cas1,cas6f,cas7f,cas5f,cas8f,DEDDh,cas3,csa3,DinG	NA|229aa|up_1|NZ_CP040848.1_1087914_1088601_+,NA|486aa|down_4|NZ_CP040848.1_1097106_1098564_+,NA|199aa|down_5|NZ_CP040848.1_1100587_1101184_-	NA|330aa|up_9|NZ_CP040848.1_1079319_1080309_+	cd13547, PBP2_Fbp_like_2, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily	NA|363aa|up_8|NZ_CP040848.1_1080323_1081412_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|565aa|up_7|NZ_CP040848.1_1081414_1083109_+	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|353aa|up_6|NZ_CP040848.1_1083130_1084189_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|155aa|up_5|NZ_CP040848.1_1084374_1084839_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|228aa|up_4|NZ_CP040848.1_1084959_1085643_-	PRK14118, gpmA, 2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA|424aa|up_3|NZ_CP040848.1_1085783_1087055_+	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	NA|281aa|up_2|NZ_CP040848.1_1087051_1087894_+	COG2861, COG2861, Uncharacterized protein conserved in bacteria [Function unknown]	NA|229aa|up_1|NZ_CP040848.1_1087914_1088601_+	NA	NA|854aa|up_0|NZ_CP040848.1_1088707_1091269_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|221aa|down_0|NZ_CP040848.1_1092602_1093265_+	pfam08722, Tn7_Tnp_TnsA_N, TnsA endonuclease N terminal	NA|643aa|down_1|NZ_CP040848.1_1093254_1095183_+	pfam00665, rve, Integrase core domain	NA|296aa|down_2|NZ_CP040848.1_1095182_1096070_+	pfam05621, TniB, Bacterial TniB protein	NA|373aa|down_3|NZ_CP040848.1_1096027_1097146_+	pfam06527, TniQ, TniQ	NA|486aa|down_4|NZ_CP040848.1_1097106_1098564_+	NA	NA|199aa|down_5|NZ_CP040848.1_1100587_1101184_-	NA	NA|403aa|down_6|NZ_CP040848.1_1104799_1106008_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|955aa|down_7|NZ_CP040848.1_1106402_1109267_-	PRK11054, helD, DNA helicase IV; Provisional	NA|206aa|down_8|NZ_CP040848.1_1112974_1113592_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|290aa|down_9|NZ_CP040848.1_1113702_1114572_+	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]
