The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	1293	31544	5040532	plate,tail,protease	Vibrio_phage(26.67%)	31	NA	NA
WP_151347492.1|1293_1917_+|plate	phage baseplate assembly protein V	plate	A0A1B2LRU5	Wolbachia_phage	37.9	2.1e-14
WP_151347493.1|1955_3425_+|tail	phage tail protein	tail	R9TMQ0	Vibrio_phage	45.2	6.4e-78
WP_057071470.1|3421_3928_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_151347494.1|3983_4271_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_151347495.1|6240_6711_+|tail	phage tail protein	tail	D4HTW5	Vibrio_phage	34.9	1.4e-15
WP_048701713.1|6685_6901_+|tail	tail protein	tail	NA	NA	NA	NA
WP_151347496.1|6902_8021_+	late control protein D	NA	R9TNM7	Vibrio_phage	33.4	7.1e-37
WP_048701710.1|8059_8407_+|plate	baseplate assembly protein	plate	D4HTV2	Vibrio_phage	49.1	9.9e-22
WP_151347497.1|8396_9311_+|plate	baseplate assembly protein	plate	A0A193GYM8	Enterobacter_phage	48.8	1.2e-63
WP_151347498.1|9303_9855_+|tail	phage tail protein I	tail	A0A0F7LDF3	Escherichia_phage	44.8	2.9e-28
WP_151347499.1|9857_11618_+	hypothetical protein	NA	K7NS29	Klebsiella_phage	36.6	6.4e-16
WP_151348054.1|11628_12213_+|tail	tail fiber assembly protein	tail	A0A192Y8L2	Salmonella_phage	51.1	2.8e-45
WP_151347500.1|12219_13323_-	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_151348055.1|13821_14241_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
WP_151347501.1|14243_15512_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	92.2	2.4e-230
WP_151347502.1|15693_15939_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151347503.1|15957_16260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151347504.1|16420_17092_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.0	4.5e-79
WP_040022190.1|17571_18381_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_013096356.1|18380_19574_-	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_129327279.1|19584_20943_-	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	NA	A0A0P0IR83	Acinetobacter_phage	39.5	1.6e-35
WP_020690934.1|20946_22542_-	bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD	NA	A0A0N7IRD9	Acinetobacter_phage	37.6	5.0e-52
WP_029883574.1|22541_24104_-	anthranilate synthase component 1	NA	NA	NA	NA	NA
WP_106993556.1|24199_24244_-	trp operon leader peptide	NA	NA	NA	NA	NA
WP_061771733.1|24383_25265_+	5'-3' exoribonuclease	NA	NA	NA	NA	NA
WP_013096362.1|25261_25882_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_035942059.1|26201_26465_-	hypothetical protein	NA	NA	NA	NA	NA
WP_060578708.1|26454_27603_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_013096363.1|27986_28862_+	23S rRNA pseudouridine(2605) synthase RluB	NA	NA	NA	NA	NA
WP_040022201.1|28898_29489_-	cob(I)yrinic acid a,c-diamide adenosyltransferase	NA	NA	NA	NA	NA
WP_040022203.1|30497_31544_+|protease	protease SohB	protease	A0A2H4UUF9	Bodo_saltans_virus	28.7	6.2e-19
>prophage 2
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	58224	106451	5040532	terminase,tail,lysis	Enterobacteria_phage(37.78%)	56	NA	NA
WP_020690953.1|58224_58929_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	35.9	2.0e-29
WP_038419671.1|58925_59993_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_151347506.1|60005_60920_-	glycosyl transferase	NA	NA	NA	NA	NA
WP_013096393.1|61117_61924_-	peptide ABC transporter ATP-binding protein SapF	NA	G3M9Y6	Bacillus_virus	28.5	4.6e-14
WP_013096394.1|61925_62918_-	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	26.5	3.6e-08
WP_014832197.1|65066_65381_-	hypothetical protein	NA	K7PM28	Enterobacteria_phage	52.5	2.1e-10
WP_014832196.1|65391_65631_-	DUF4060 family protein	NA	K7PHF4	Enterobacteria_phage	75.6	5.5e-24
WP_046887728.1|65669_66755_-	recombinase RecT	NA	K7PKR8	Enterobacteria_phage	63.6	1.3e-123
WP_151347507.1|66764_69902_-	exodeoxyribonuclease	NA	K7P6V4	Enterobacteria_phage	61.5	0.0e+00
WP_022651301.1|70720_71113_-	helix-turn-helix domain-containing protein	NA	K7PM35	Enterobacteria_phage	63.1	6.3e-41
WP_022651300.1|71212_71440_+	hypothetical protein	NA	A0A0M4QX15	Salmonella_phage	62.2	1.6e-20
WP_045903090.1|71444_71996_+	regulatory protein	NA	K7PJT7	Enterobacteria_phage	45.4	2.9e-31
WP_077256281.1|72140_72998_+	hypothetical protein	NA	K7PGZ0	Enterobacteria_phage	70.4	2.6e-100
WP_048254461.1|72994_73681_+	phage replication protein P	NA	G8C7U6	Escherichia_phage	62.6	2.9e-81
WP_151347508.1|73667_73850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014832179.1|73957_74407_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
WP_014832178.1|74710_74929_+	hypothetical protein	NA	NA	NA	NA	NA
WP_048254464.1|75312_75762_+	VOC family protein	NA	NA	NA	NA	NA
WP_014832176.1|76128_76353_+	DinI family protein	NA	H6WRY5	Salmonella_phage	62.3	1.1e-21
WP_071605448.1|76504_76702_+	hypothetical protein	NA	K7PHG9	Enterobacteria_phage	70.5	1.4e-20
WP_151347509.1|76741_77344_+	DUF1367 family protein	NA	H6WRY7	Salmonella_phage	82.0	2.0e-94
WP_049136396.1|77348_77549_+	hypothetical protein	NA	H6WRY8	Salmonella_phage	75.8	1.1e-25
WP_096927580.1|77551_77914_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	82.2	6.8e-50
WP_096927336.1|77910_78744_+	antitermination protein	NA	K7PKS8	Enterobacteria_phage	80.1	1.3e-125
WP_020690974.1|79251_79446_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047361618.1|80049_80274_+|lysis	lysis protein	lysis	M9NZI9	Enterobacteria_phage	91.3	1.6e-28
WP_047361619.1|80251_80746_+	lysozyme	NA	M9P0E5	Enterobacteria_phage	93.9	8.1e-86
WP_094084369.1|80742_81204_+|lysis	lysis protein	lysis	M9NYX9	Enterobacteria_phage	67.3	5.8e-46
WP_151347510.1|81435_81774_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347511.1|82030_82375_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094084367.1|82428_83415_+|terminase	terminase small subunit	terminase	I6X6R5	Burkholderia_virus	36.4	9.9e-35
WP_151347512.1|83392_84700_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	58.2	3.1e-145
WP_151347513.1|84701_86090_+	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	49.8	2.3e-125
WP_151347514.1|86091_87189_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	58.8	6.5e-120
WP_094084365.1|87269_88040_+	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	60.0	9.7e-70
WP_151347515.1|88051_89005_+	Ig domain-containing protein	NA	A0A1B0VMF8	Pseudomonas_phage	74.7	2.6e-133
WP_062934626.1|89322_89805_+	hypothetical protein	NA	A0A2I7RQ74	Vibrio_phage	31.3	2.5e-07
WP_151347516.1|89806_90157_+	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	2.0e-30
WP_049136383.1|90158_90743_+	hypothetical protein	NA	G8C7Q1	Escherichia_phage	54.2	3.2e-49
WP_151347517.1|90739_91150_+	hypothetical protein	NA	I6PDJ8	Cronobacter_phage	52.9	1.5e-32
WP_063437920.1|91219_91891_+|tail	phage tail protein	tail	I6PBN6	Cronobacter_phage	47.3	2.0e-50
WP_063437921.1|91955_92267_+	hypothetical protein	NA	I6PDG2	Cronobacter_phage	67.0	4.1e-35
WP_032618388.1|92263_92578_+	hypothetical protein	NA	I6PD79	Cronobacter_phage	66.7	5.1e-17
WP_151347518.1|92574_95487_+|tail	phage tail tape measure protein	tail	I6PCW3	Cronobacter_phage	36.4	7.5e-139
WP_020690998.1|95563_95917_+	hypothetical protein	NA	A0A1V0E5P9	Salmonella_phage	98.3	6.0e-59
WP_048970587.1|95972_96320_+|tail	phage tail protein	tail	I6PBN7	Cronobacter_phage	61.7	4.9e-37
WP_151347519.1|96316_97072_+|tail	phage minor tail protein L	tail	K7PGX3	Enterobacteria_phage	76.4	9.7e-115
WP_151347520.1|97073_97787_+	peptidase P60	NA	K7PJX1	Enterobacterial_phage	95.7	7.5e-141
WP_151347521.1|97937_98429_+	hypothetical protein	NA	NA	NA	NA	NA
WP_022651265.1|98540_99167_+|tail	tail assembly protein	tail	K7PH91	Enterobacterial_phage	59.9	1.8e-53
WP_014832155.1|99219_99936_+	YnfC family lipoprotein	NA	NA	NA	NA	NA
WP_151347522.1|99989_103544_+	DUF1983 domain-containing protein	NA	K7P7D9	Enterobacteria_phage	90.3	0.0e+00
WP_151347523.1|103585_103900_+	hypothetical protein	NA	A0A2P0WA17	Enterobacter_phage	70.6	4.9e-36
WP_151347524.1|103900_104572_+	hypothetical protein	NA	A0A2P0WA07	Enterobacter_phage	70.9	3.5e-84
WP_151347525.1|104679_104913_+	cor protein	NA	E4WL42	Enterobacteria_phage	76.3	2.5e-29
WP_151347526.1|104972_106451_+|tail	phage tail protein	tail	K7P6T0	Enterobacteria_phage	58.7	2.6e-140
>prophage 3
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	3023613	3102056	5040532	integrase,transposase	Escherichia_phage(32.0%)	59	3059126:3059185	3102137:3102276
WP_000090707.1|3023613_3024456_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_001324699.1|3028052_3029609_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000262423.1|3029620_3030547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001097216.1|3030899_3031199_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001239419.1|3031762_3033589_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000647571.1|3033757_3034108_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	61.4	8.1e-16
WP_000790485.1|3034255_3034687_-	silver-binding protein SilE	NA	NA	NA	NA	NA
WP_000555736.1|3034931_3036413_-	copper/silver sensor histidine kinase SilS	NA	W8CYF6	Bacillus_phage	30.1	1.8e-27
WP_000697968.1|3036405_3037086_-	copper/silver response regulator transcription factor SilR	NA	W8CYM9	Bacillus_phage	36.0	2.7e-31
WP_151347807.1|3037275_3038661_+	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA	NA
WP_001246155.1|3038688_3039042_+	cation efflux system protein CusF	NA	NA	NA	NA	NA
WP_000574029.1|3040457_3043604_+	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	NA	NA	NA	NA	NA
WP_000758228.1|3043690_3044131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000843494.1|3046744_3046942_+	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
WP_151347808.1|3046975_3047713_-	peptidase M23	NA	A8ATH6	Listeria_phage	41.0	1.0e-12
WP_001023257.1|3048001_3048451_-	copper resistance protein	NA	NA	NA	NA	NA
WP_001242438.1|3050500_3051397_+	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA	NA
WP_000025662.1|3051436_3051817_+	copper resistance system metallochaperone PcoC	NA	NA	NA	NA	NA
WP_000998778.1|3051821_3052751_+	copper resistance inner membrane protein PcoD	NA	NA	NA	NA	NA
WP_001188930.1|3052805_3053486_+	copper response regulator transcription factor PcoR	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
WP_001211179.1|3053482_3054883_+	copper resistance membrane spanning protein PcoS	NA	W8CYF6	Bacillus_phage	26.6	3.2e-18
WP_000723069.1|3055100_3055535_+	copper resistance system metallochaperone PcoE	NA	NA	NA	NA	NA
3059126:3059185	attL	GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTT	NA	NA	NA	NA
WP_001067855.1|3059177_3059882_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
3059126:3059185	attL	GGCACTGTTGCAAAGTTAGCGATGAGGCAGCCTTTTGTCTTATTCAAAGGCCTTACATTT	NA	NA	NA	NA
WP_078310596.1|3060142_3060340_+|integrase,transposase	DDE-type integrase/transposase/recombinase	integrase,transposase	Q716C2	Shigella_phage	57.4	1.2e-11
WP_071886836.1|3060407_3060623_-	hypothetical protein	NA	NA	NA	NA	NA
WP_031942322.1|3060703_3061372_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
WP_013851371.1|3063185_3063689_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_001067855.1|3063725_3064430_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_071886840.1|3064488_3064956_+	restriction endonuclease	NA	NA	NA	NA	NA
WP_001749967.1|3064960_3065167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001288432.1|3065548_3066982_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.6	7.0e-106
WP_024139167.1|3068235_3068448_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001389365.1|3068489_3069254_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_001144737.1|3069396_3069663_-	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA	NA
WP_004201280.1|3069883_3070357_-	trimethoprim-resistant dihydrofolate reductase DfrA14	NA	A0A140HLG8	Bacillus_phage	33.8	5.3e-18
WP_000845048.1|3070512_3071526_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
WP_015344971.1|3071494_3071779_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|3072071_3072776_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_014386481.1|3073648_3074293_-	quinolone resistance pentapeptide repeat protein QnrB1	NA	NA	NA	NA	NA
3072769:3073589	attR	AAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCTTAATTACCGGTGGGGATTCAGGGATTGGTCGTGCTGTTGCTATTGCCTATGCTCGTGAAGGCGCTGATGTTGCGATTAACTATTTACCTGAAGAAGAAGACGATGCGCGTGAAGTGGTCGATCTGATAAAAAAAGCAGGCAGAAATGTTTTGGCCATCCCCGGAGATATCCGTGATGAGGCTTTTTGCGGTCATCTGGTAACACAGGCGGTAAAAGGACTGGGAGGGTTGGATATCCTCGTCAATAATGCGGGTCGTCAGCAATTTTGTGAGTCAATTGAGGAACTCACCACAGAAGACTTCGACGCAACATTCAAAACCAATGTTTACGCTATGTTTTGGATCACCAAAGCGGCCATACCCCATCTTTCACCAGACAGCGTGATAATTAATACCTCCTCCGTACAGGCTTATGAGCCAAGTGAAATCTTGCTTGATTATGCTCAGACTAAAGCAGCTATCGTGGCATTTACTAAATCGCTGGCGAAACAGCTGGCCCCGAAAGGGATCCGTGTCAATGCCGTCGCGCCGGGTCCATACTGGACTGTACTGCAGTGCTGTGGTGGTCAACCGCAGGAAAAGGTGGAGAAATTTGGGGCAAATGCGCCGCTGGGACGCCCTGGTCAACCGGTGGAAATCGCGCCGCTTTATGTCACCCTGGCCGCTCGGGAGAACAGCTATACGTCTGGTCAGGTCTGGTGTTCTGATGGGGGGACCGGAACCCTCTAACGTTTACGATCTGTGCGTCGAAAGTGACTTTT	NA	NA	NA	NA
WP_001067855.1|3079065_3079770_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
3072769:3073589	attR	AAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGCTAACTTTGCAACAGTGCCTTAATTACCGGTGGGGATTCAGGGATTGGTCGTGCTGTTGCTATTGCCTATGCTCGTGAAGGCGCTGATGTTGCGATTAACTATTTACCTGAAGAAGAAGACGATGCGCGTGAAGTGGTCGATCTGATAAAAAAAGCAGGCAGAAATGTTTTGGCCATCCCCGGAGATATCCGTGATGAGGCTTTTTGCGGTCATCTGGTAACACAGGCGGTAAAAGGACTGGGAGGGTTGGATATCCTCGTCAATAATGCGGGTCGTCAGCAATTTTGTGAGTCAATTGAGGAACTCACCACAGAAGACTTCGACGCAACATTCAAAACCAATGTTTACGCTATGTTTTGGATCACCAAAGCGGCCATACCCCATCTTTCACCAGACAGCGTGATAATTAATACCTCCTCCGTACAGGCTTATGAGCCAAGTGAAATCTTGCTTGATTATGCTCAGACTAAAGCAGCTATCGTGGCATTTACTAAATCGCTGGCGAAACAGCTGGCCCCGAAAGGGATCCGTGTCAATGCCGTCGCGCCGGGTCCATACTGGACTGTACTGCAGTGCTGTGGTGGTCAACCGCAGGAAAAGGTGGAGAAATTTGGGGCAAATGCGCCGCTGGGACGCCCTGGTCAACCGGTGGAAATCGCGCCGCTTTATGTCACCCTGGCCGCTCGGGAGAACAGCTATACGTCTGGTCAGGTCTGGTGTTCTGATGGGGGGACCGGAACCCTCTAACGTTTACGATCTGTGCGTCGAAAGTGACTTTT	NA	NA	NA	NA
WP_002063889.1|3080963_3081506_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000557452.1|3081518_3082379_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA	NA
WP_001067855.1|3082485_3083190_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001334766.1|3083821_3084652_-	oxacillin-hydrolyzing class D beta-lactamase OXA-1	NA	NA	NA	NA	NA
WP_063840321.1|3084782_3085337_-	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
WP_001067855.1|3085480_3086185_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001393253.1|3088506_3088839_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
WP_000239590.1|3088885_3089761_-	class A extended-spectrum beta-lactamase CTX-M-15	NA	A0A1B0VBP7	Salmonella_phage	82.4	1.1e-125
WP_000608644.1|3090016_3091279_-|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
WP_001235713.1|3091842_3092400_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
WP_000027057.1|3092582_3093443_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_001120891.1|3093652_3094192_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
WP_000480968.1|3094163_3095000_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
WP_001082319.1|3094999_3095803_-	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	Q75ZG1	Hepacivirus	34.3	4.9e-24
WP_001043260.1|3095863_3096679_-	sulfonamide-resistant dihydropteroate synthase Sul2	NA	NA	NA	NA	NA
WP_000954592.1|3097008_3097185_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
WP_000427619.1|3097366_3098371_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
WP_001067855.1|3100267_3100972_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000845039.1|3101042_3102056_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
3102137:3102276	attR	TGATGTTATGGAGCAGCAACGATGTTACGCAGCAGGGCAGTCGCCCTAAAACAAAGTTAAACATCATGAGGGAAGCGATGATCGCCGAAGTATCGACTCAACTATCAGAGGTAGTTGGCGTCATCGAGCGCCATCTCGAA	NA	NA	NA	NA
>prophage 4
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	3546313	3570845	5040532	tRNA,plate,tail,lysis	Erwinia_phage(40.74%)	30	NA	NA
WP_040021848.1|3546313_3546889_-	phage repressor protein CI	NA	A0A218M4J1	Erwinia_phage	63.8	1.7e-66
WP_014833350.1|3547021_3547285_+	hypothetical protein	NA	A0A218M4I5	Erwinia_phage	96.5	3.2e-41
WP_023619964.1|3547317_3547656_+	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	74.8	5.4e-41
WP_038420649.1|3547723_3547951_+	DUF2732 domain-containing protein	NA	A0A0M3UL87	Salmonella_phage	62.7	6.4e-14
WP_038420647.1|3547950_3548172_+	TraR/DksA family transcriptional regulator	NA	A0A0M4S5Q7	Salmonella_phage	72.2	3.9e-24
WP_023619960.1|3550242_3550683_+	DinI family protein	NA	A0A218M4I0	Erwinia_phage	76.6	5.6e-54
WP_028027926.1|3550848_3551052_+|tail	tail protein X	tail	Q858W3	Yersinia_virus	74.6	2.3e-23
WP_020689436.1|3551042_3551264_+	primosomal protein	NA	A0A218M4L5	Erwinia_phage	73.6	7.9e-25
WP_048971891.1|3551247_3551757_+	lysozyme	NA	A0A218M4K3	Erwinia_phage	80.2	1.8e-72
WP_151347830.1|3551753_3552167_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A218M4K2	Erwinia_phage	59.6	1.9e-35
WP_072039866.1|3552138_3552312_+|lysis	phage lysis protein	lysis	S4TNY4	Salmonella_phage	72.7	3.1e-16
WP_102752654.1|3552274_3552742_+|tail	phage tail protein	tail	A0A218M4K6	Erwinia_phage	62.3	9.8e-49
WP_020689441.1|3553494_3553845_+|plate	baseplate assembly protein	plate	A0A0M4RE59	Salmonella_phage	70.7	2.6e-38
WP_038420635.1|3553850_3554759_+|plate	baseplate assembly protein	plate	Q6K1H4	Salmonella_virus	80.5	3.2e-128
WP_020689443.1|3554751_3555282_+|tail	phage tail protein I	tail	Q37841	Escherichia_phage	86.9	2.0e-90
WP_151347831.1|3556951_3557338_+	hypothetical protein	NA	NA	NA	NA	NA
WP_038420630.1|3557347_3557854_+|tail	tail fiber assembly protein	tail	F1BUK2	Cronobacter_phage	52.7	1.7e-43
WP_040021829.1|3557977_3559171_+|tail	phage tail sheath protein	tail	U5N3V0	Enterobacteria_phage	81.4	2.0e-186
WP_014833332.1|3559182_3559701_+|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	80.8	4.5e-79
WP_038420626.1|3559756_3560065_+|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	70.1	2.6e-26
WP_151347832.1|3560097_3560217_+|tail	GpE family phage tail protein	tail	O80316	Escherichia_phage	87.2	2.8e-13
WP_151347833.1|3560209_3562657_+|tail	phage tail tape measure protein	tail	M1T2S3	Escherichia_phage	37.8	9.4e-135
WP_014833328.1|3562668_3563133_+|tail	phage tail protein	tail	O80317	Escherichia_phage	70.4	4.6e-59
WP_151347834.1|3563129_3564275_+	phage late control D family protein	NA	A0A218M4J7	Erwinia_phage	62.3	2.3e-131
WP_014833326.1|3564341_3564542_+	transcriptional regulator	NA	A0A2I8TV89	Erwinia_phage	77.4	5.3e-20
WP_020689452.1|3564896_3565403_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
WP_013098777.1|3565505_3567353_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
WP_014833324.1|3567517_3569263_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	39.2	3.7e-77
WP_001144069.1|3569379_3569595_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_013098775.1|3569831_3570845_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	58.6	8.2e-109
>prophage 5
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	3798415	3806404	5040532	integrase	Enterobacteria_phage(50.0%)	11	3799244:3799262	3811037:3811055
WP_094084804.1|3798415_3799108_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A7K9	Microcystis_virus	37.0	2.0e-10
3799244:3799262	attL	ATTCCCTTCGCCCGCTCCA	NA	NA	NA	NA
WP_025912448.1|3799426_3800641_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	59.3	4.8e-140
WP_025912447.1|3800783_3801587_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025912446.1|3801774_3801996_+	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
WP_023301290.1|3802016_3802589_+	hypothetical protein	NA	A0A1W6JPH8	Morganella_phage	65.7	1.6e-56
WP_086519776.1|3802637_3802817_-	hypothetical protein	NA	A0A2H4JB52	uncultured_Caudovirales_phage	56.9	4.4e-10
WP_071531908.1|3802946_3803135_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_025912445.1|3803127_3804003_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_020686326.1|3804118_3804322_+	hypothetical protein	NA	K7PHG9	Enterobacteria_phage	54.8	5.8e-14
WP_023325055.1|3804332_3804647_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_151347848.1|3804643_3806404_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	43.9	8.6e-106
3811037:3811055	attR	ATTCCCTTCGCCCGCTCCA	NA	NA	NA	NA
>prophage 6
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	4591842	4599587	5040532		Ostreococcus_lucimarinus_virus(16.67%)	7	NA	NA
WP_095427554.1|4591842_4593249_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.3	1.8e-37
WP_095427555.1|4593344_4594430_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	51.6	1.6e-97
WP_095427556.1|4594429_4595311_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	63.8	2.1e-105
WP_095427557.1|4595538_4596705_+	UDP-glucose 6-dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	53.5	1.6e-111
WP_151347970.1|4596757_4597762_-	NAD-dependent epimerase	NA	A0A2K9L4U8	Tupanvirus	30.4	5.0e-34
WP_151347971.1|4597955_4598936_+	LPS O-antigen chain length determinant protein WzzB	NA	NA	NA	NA	NA
WP_000954830.1|4598975_4599587_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	A0A2H4UVM0	Bodo_saltans_virus	29.3	6.0e-14
>prophage 7
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	4702479	4727510	5040532	integrase,tail	Pectobacterium_phage(33.33%)	33	4696890:4696906	4719143:4719159
4696890:4696906	attL	TCCTGAGCTGGTGGGCG	NA	NA	NA	NA
WP_096896928.1|4702479_4703496_-|integrase	tyrosine-type recombinase/integrase	integrase	H9C152	Pectobacterium_phage	63.7	1.4e-124
WP_151347981.1|4703479_4703728_-	DUF4224 domain-containing protein	NA	H9C153	Pectobacterium_phage	42.3	1.3e-07
WP_151347982.1|4703663_4703888_-	hypothetical protein	NA	H9C154	Pectobacterium_phage	56.3	1.1e-10
WP_151347983.1|4703938_4704121_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151347984.1|4704123_4704684_-	siphovirus Gp157 family protein	NA	H9C156	Pectobacterium_phage	57.4	1.3e-47
WP_151348071.1|4704680_4706897_-	hypothetical protein	NA	H9C157	Pectobacterium_phage	34.0	1.2e-99
WP_078309707.1|4706934_4707180_-	hypothetical protein	NA	A0A1B1W282	Salmonella_phage	56.2	1.8e-14
WP_078309709.1|4707187_4707511_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151347985.1|4708044_4708500_-	helix-turn-helix domain-containing protein	NA	A0A0U2QW76	Escherichia_phage	49.3	2.8e-32
WP_151347986.1|4708606_4708840_+	helix-turn-helix domain-containing protein	NA	A0A0U2S629	Escherichia_phage	51.4	7.3e-13
WP_151347987.1|4708905_4709352_+	hypothetical protein	NA	H9C162	Pectobacterium_phage	52.5	5.9e-27
WP_151347988.1|4709373_4709598_+	hypothetical protein	NA	H9C163	Pectobacterium_phage	64.9	2.0e-20
WP_151347989.1|4710653_4712042_+	replicative DNA helicase	NA	Q8HA30	Enterobacteria_phage	48.0	1.1e-108
WP_017384463.1|4712763_4713012_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347990.1|4713004_4713457_+	hypothetical protein	NA	F1C5B6	Cronobacter_phage	40.6	9.2e-12
WP_151347991.1|4713566_4713959_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347992.1|4713951_4714290_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	69.6	1.2e-37
WP_151347993.1|4714465_4714657_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347994.1|4714725_4715322_+	DUF1367 family protein	NA	H9C173	Pectobacterium_phage	71.7	1.0e-79
WP_151347995.1|4715333_4715636_+	DUF968 domain-containing protein	NA	A0A1I9KFA7	Aeromonas_phage	53.7	4.4e-26
WP_017384458.1|4715791_4716082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347996.1|4716118_4716604_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015571350.1|4716617_4716848_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347997.1|4716851_4718477_+|tail	phage tail protein	tail	A0A2H4J3N6	uncultured_Caudovirales_phage	58.5	8.7e-169
WP_001619031.1|4718473_4718707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151347998.1|4718693_4719530_+	hypothetical protein	NA	A0A2H4JEQ5	uncultured_Caudovirales_phage	43.8	4.3e-47
4719143:4719159	attR	TCCTGAGCTGGTGGGCG	NA	NA	NA	NA
WP_151347999.1|4719743_4720118_+	hypothetical protein	NA	A0AR14	Salmonella_phage	72.9	5.4e-42
WP_151348000.1|4720356_4721268_+	hypothetical protein	NA	A0A2H4JC66	uncultured_Caudovirales_phage	37.2	7.8e-42
WP_078309733.1|4721324_4721888_+	hypothetical protein	NA	A0A2H4JID6	uncultured_Caudovirales_phage	51.9	1.6e-50
WP_151348001.1|4721889_4723878_+	hypothetical protein	NA	A0A2H4J6H2	uncultured_Caudovirales_phage	48.5	3.1e-184
WP_078309737.1|4723879_4724329_+	GNAT family N-acetyltransferase	NA	A0A2H4J9Z5	uncultured_Caudovirales_phage	42.3	3.4e-22
WP_017384448.1|4724331_4724799_+	hypothetical protein	NA	A0A2H4J679	uncultured_Caudovirales_phage	46.8	3.2e-07
WP_151348002.1|4724801_4727510_+	lytic transglycosylase	NA	G9L6D3	Escherichia_phage	64.5	0.0e+00
>prophage 8
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	4730823	4738268	5040532	holin	uncultured_Caudovirales_phage(33.33%)	9	NA	NA
WP_151348003.1|4730823_4731165_+	hypothetical protein	NA	A0A2H4J7H0	uncultured_Caudovirales_phage	53.6	2.5e-22
WP_151348004.1|4731161_4732772_+	transcriptional regulator	NA	A0A2H4JCA3	uncultured_Caudovirales_phage	70.3	6.5e-225
WP_151348005.1|4732792_4733248_+	hypothetical protein	NA	A0A2H4J3Z5	uncultured_Caudovirales_phage	40.7	1.7e-18
WP_151348006.1|4733268_4735047_+	hypothetical protein	NA	B3VCX0	Enterobacteria_phage	60.2	1.2e-19
WP_151348007.1|4735185_4735416_+|holin	holin	holin	A5LH82	Enterobacteria_phage	69.6	3.8e-22
WP_151348008.1|4735396_4735936_+	lysozyme	NA	K7PM52	Enterobacteria_phage	90.8	4.8e-92
WP_151348009.1|4735932_4736292_+	hypothetical protein	NA	R9TPM9	Aeromonas_phage	45.5	1.0e-13
WP_013096030.1|4736679_4737396_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	26.1	5.0e-12
WP_057072613.1|4737392_4738268_-	ATP-binding cassette domain-containing protein	NA	A0A285PWH2	Cedratvirus	25.5	3.1e-11
>prophage 9
NZ_CP040827	Enterobacter cloacae strain NH77 chromosome, complete genome	5040532	5022494	5031185	5040532		Enterobacteria_phage(25.0%)	12	NA	NA
WP_151348039.1|5022494_5022755_+	DUF977 family protein	NA	H6WRX9	Salmonella_phage	70.2	3.4e-27
WP_151348040.1|5023025_5024033_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151348041.1|5024051_5024597_-	hypothetical protein	NA	NA	NA	NA	NA
WP_151348042.1|5024909_5025236_+	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	47.6	7.3e-19
WP_151348043.1|5025408_5025627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_151348044.1|5025771_5026065_+	hypothetical protein	NA	Q6V7S4	Burkholderia_virus	55.8	3.0e-19
WP_151348045.1|5026057_5026426_+	RusA family crossover junction endodeoxyribonuclease	NA	K7P6W0	Enterobacteria_phage	61.7	1.2e-38
WP_151348046.1|5026418_5026772_+	antitermination protein	NA	A0A0P0ZCW0	Stx2-converting_phage	84.1	3.8e-53
WP_151348047.1|5026780_5027821_-	DNA cytosine methyltransferase	NA	A0A0R6PG08	Moraxella_phage	40.1	3.7e-64
WP_151348048.1|5027833_5029615_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_048338962.1|5029833_5030136_+	hypothetical protein	NA	O64361	Escherichia_phage	68.3	1.4e-32
WP_151348049.1|5030666_5031185_+	hypothetical protein	NA	K7PHH7	Enterobacteria_phage	83.6	3.3e-74
