The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	931151	940499	4763930	integrase,protease	Dickeya_phage(16.67%)	9	932402:932416	946063:946077
WP_001201750.1|931151_932270_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000125885.1|932266_934213_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.9	2.0e-39
932402:932416	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
WP_000447499.1|934342_934564_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|934887_935208_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934057.1|935238_937515_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	1.1e-164
WP_071591100.1|937710_938040_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001747668.1|938011_938488_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001117984.1|939762_939960_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001747671.1|940121_940499_-|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	40.2	1.0e-19
946063:946077	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
>prophage 2
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	1084738	1121974	4763930	plate,transposase	Enterobacteria_phage(20.0%)	29	NA	NA
WP_100148601.1|1084738_1085994_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	2.4e-17
WP_000623370.1|1086274_1086733_-	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_001227394.1|1086856_1087228_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001022123.1|1087236_1087677_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000928422.1|1087696_1088209_-	LysM peptidoglycan-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001216386.1|1088249_1088696_-	DUF1240 domain-containing protein	NA	NA	NA	NA	NA
WP_006496204.1|1088724_1088856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001139255.1|1091140_1091983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000002328.1|1092006_1092486_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_000076070.1|1092504_1093866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001137105.1|1093876_1097338_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_000365805.1|1097416_1098829_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_000089147.1|1098830_1099568_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_000614296.1|1099564_1102300_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.5	2.9e-84
WP_000343978.1|1102312_1103071_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_000246455.1|1103075_1104407_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_130549539.1|1104409_1104913_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_000796942.1|1104939_1106226_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_000509052.1|1106250_1107339_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_000393863.1|1107302_1109156_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_000611701.1|1109160_1109577_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_006496106.1|1109573_1111046_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_000524265.1|1111094_1111307_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000031252.1|1111336_1111840_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_001142966.1|1112468_1112987_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_006496101.1|1113209_1115351_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.8	3.5e-24
WP_000014621.1|1115419_1119586_+	RHS repeat protein	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	40.6	1.4e-21
WP_000739389.1|1119653_1120619_+	Sel1 repeat protein	NA	NA	NA	NA	NA
WP_109188131.1|1120812_1121974_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.8	1.2e-47
>prophage 3
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	2128505	2139012	4763930		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2128505_2129819_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565903.1|2129845_2130925_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
WP_000648785.1|2130929_2131703_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018219.1|2131718_2132693_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973710.1|2132698_2133250_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.6	1.3e-52
WP_000857531.1|2133250_2134129_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
WP_001023665.1|2134176_2135076_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	1.1e-29
WP_000697849.1|2135075_2136161_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	1.0e-101
WP_000981469.1|2136537_2137431_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001111843.1|2137608_2139012_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	3.1e-21
>prophage 4
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	2215042	2224213	4763930	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195330.1|2215042_2217076_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703143.1|2217316_2217775_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	71.9	2.4e-52
WP_001197951.1|2217946_2218477_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|2218533_2219001_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|2219047_2219767_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272851.1|2219763_2221449_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	6.2e-279
WP_001240418.1|2221671_2222403_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2222462_2222570_+	protein YohO	NA	NA	NA	NA	NA
WP_000824850.1|2222550_2223282_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2223265_2224213_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
>prophage 5
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	2693674	2791012	4763930	plate,portal,lysis,terminase,tail,integrase,head,tRNA,capsid	Salmonella_phage(74.07%)	92	2772707:2772722	2800601:2800616
WP_000083343.1|2693674_2694412_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2694542_2695877_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001747585.1|2695894_2696794_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188414.1|2696896_2697484_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2697545_2697929_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179975.1|2698247_2698937_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	50.0	2.1e-55
WP_000997368.1|2699052_2700090_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
WP_001098732.1|2700293_2700713_+	thioredoxin TrxC	NA	A0A0K2FIM3	Achromobacter_phage	40.6	1.2e-16
WP_000183644.1|2700785_2701466_+	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_000082651.1|2701519_2704180_+	protein lysine acetyltransferase	NA	NA	NA	NA	NA
WP_000949286.1|2704294_2705650_+	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001264468.1|2705692_2706016_+	YfiM family lipoprotein	NA	NA	NA	NA	NA
WP_000807814.1|2706012_2707314_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	30.1	3.4e-43
WP_000985658.1|2707417_2707873_-	DUF4385 domain-containing protein	NA	E3SMI8	Prochlorococcus_phage	49.3	8.6e-34
WP_001235092.1|2713928_2716502_-	ATP-dependent chaperone ClpB	NA	H6X3M6	Enterobacteria_phage	35.5	2.6e-127
WP_000992634.1|2716631_2717363_-	polyphenol oxidase	NA	NA	NA	NA	NA
WP_000079130.1|2717359_2718340_-	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA	NA	NA	NA	NA
WP_000197660.1|2718471_2719209_+	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
WP_000178449.1|2719480_2719819_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
WP_010989056.1|2719922_2719970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000200080.1|2720069_2721230_+	bifunctional chorismate mutase/prephenate dehydratase	NA	NA	NA	NA	NA
WP_000210991.1|2721190_2722099_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_000225191.1|2722156_2723278_-	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA	NA
WP_006496406.1|2723287_2724358_-	3-deoxy-7-phosphoheptulonate synthase AroF	NA	A0A0F6R6T6	Escherichia_coli_O157_typing_phage	51.8	1.1e-90
WP_001212379.1|2724797_2725316_+	YfiR family protein	NA	NA	NA	NA	NA
WP_001030981.1|2725308_2726529_+	diguanylate cyclase DgcN	NA	A0A2K8I9Y5	Pseudomonas_phage	36.2	5.8e-08
WP_000065257.1|2726685_2727033_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000469804.1|2727073_2727841_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
WP_000043266.1|2727885_2728434_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_000256453.1|2728452_2728701_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_000460052.1|2728953_2730315_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_001537507.1|2730480_2731272_+	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_127172650.1|2731291_2732578_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_001294018.1|2732698_2733304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001518875.1|2733338_2733929_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_001059155.1|2734052_2734931_+	NAD(+) kinase	NA	NA	NA	NA	NA
WP_000880958.1|2735016_2736678_+	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_001203445.1|2736826_2737165_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_001112990.1|2737330_2737621_-	RnfH family protein	NA	NA	NA	NA	NA
WP_000242603.1|2737610_2738087_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_001518569.1|2738236_2738719_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	5.2e-29
WP_001237691.1|2739333_2750808_+	biofilm-associated protein BapA	NA	NA	NA	NA	NA
WP_000533865.1|2750872_2752282_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_000196133.1|2752278_2754459_+	type I secretion system permease/ATPase	NA	F2Y302	Organic_Lake_phycodnavirus	34.0	1.3e-18
WP_072101449.1|2754466_2755630_+	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000980498.1|2756181_2756400_-	hypothetical protein	NA	Q53ZE7	Salmonella_virus	100.0	2.1e-38
WP_006501166.1|2756468_2757569_-	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	95.6	9.0e-194
WP_000980409.1|2757565_2758051_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	8.3e-67
WP_006501165.1|2758047_2760855_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.3	0.0e+00
WP_000763316.1|2760847_2760967_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
WP_001280962.1|2760981_2761284_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
WP_001207653.1|2761338_2761854_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	99.4	2.7e-92
WP_006501164.1|2761863_2763036_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.5	3.7e-222
WP_006501163.1|2763138_2763696_-	serine-type DNA invertase Fin	NA	A0A1S6L009	Salmonella_phage	98.9	9.4e-99
WP_077918804.1|2763665_2764745_+	hypothetical protein	NA	A0A1B0V7G4	Salmonella_phage	91.8	1.2e-182
WP_001287104.1|2764751_2765159_+|tail	tail assembly protein	tail	A0A1B0V844	Salmonella_phage	85.2	6.7e-62
WP_006501158.1|2765162_2765780_-|tail	tail fiber assembly protein	tail	A0A1B0VCD0	Salmonella_phage	84.1	1.6e-94
WP_045791118.1|2765749_2767324_-|tail	tail protein	tail	A0A1S6KZZ8	Salmonella_phage	60.9	3.3e-157
WP_001086802.1|2767320_2767926_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	98.5	1.1e-116
WP_006493508.1|2767918_2768827_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	97.7	7.2e-157
WP_006493507.1|2768813_2769173_-|plate	baseplate assembly protein W	plate	E5G6N7	Salmonella_phage	92.4	6.3e-56
WP_000993750.1|2769169_2769748_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	99.0	1.5e-107
WP_000343939.1|2769816_2770263_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	89.7	3.8e-66
WP_001039964.1|2770255_2770687_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	95.1	4.0e-73
WP_001648763.1|2770782_2771211_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	95.0	2.6e-64
WP_000871620.1|2771207_2771582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_006493502.1|2771586_2772096_-	lysozyme	NA	A0A1S6KZY9	Salmonella_phage	97.6	3.2e-93
WP_000171565.1|2772076_2772292_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	100.0	5.9e-33
WP_000868184.1|2772295_2772499_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	100.0	3.8e-34
WP_000673541.1|2772498_2772963_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	96.8	7.9e-83
2772707:2772722	attL	TTGCCGTCCAGCATAT	NA	NA	NA	NA
WP_000059169.1|2773056_2773707_-	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	98.6	1.6e-113
WP_000730754.1|2773710_2774778_-|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	98.0	2.8e-192
WP_006493498.1|2774794_2775628_-|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	97.1	1.1e-127
WP_006493495.1|2775770_2777537_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	96.6	0.0e+00
WP_006493493.1|2777536_2778571_+|portal	phage portal protein	portal	E5G6M3	Salmonella_phage	94.8	4.1e-188
WP_006493491.1|2778617_2779535_-	restriction endonuclease	NA	NA	NA	NA	NA
WP_006493490.1|2779497_2780700_-	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	37.1	5.6e-64
WP_001749760.1|2781030_2781219_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	91.7	5.7e-24
WP_001749759.1|2781356_2781584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006493489.1|2781603_2783997_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	88.8	0.0e+00
WP_006493488.1|2783993_2784851_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	69.8	4.6e-113
WP_000785514.1|2784847_2785075_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	66.7	5.4e-21
WP_001178763.1|2785074_2785302_-	DUF2732 domain-containing protein	NA	A0A0M3UL87	Salmonella_phage	64.0	8.1e-17
WP_000963476.1|2785369_2785711_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	84.1	6.0e-48
WP_001528723.1|2785674_2785869_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	84.1	5.3e-25
WP_000794278.1|2785953_2786229_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006493486.1|2786315_2786825_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	93.5	3.5e-84
WP_000102106.1|2786857_2787100_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	2.3e-38
WP_023136550.1|2787219_2787852_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	96.7	5.8e-113
WP_006493482.1|2787853_2788870_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	95.0	5.0e-191
WP_006493480.1|2788876_2790103_+	hypothetical protein	NA	E5G6K9	Salmonella_phage	65.4	3.6e-151
WP_001650427.1|2790430_2791012_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	A0A1B5FPC6	Escherichia_phage	55.8	1.5e-51
2800601:2800616	attR	ATATGCTGGACGGCAA	NA	NA	NA	NA
>prophage 6
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	4304145	4324567	4763930	plate,tail	Burkholderia_phage(45.0%)	25	NA	NA
WP_000587738.1|4304145_4304874_-	hypothetical protein	NA	A0A077SLK3	Escherichia_phage	37.3	5.6e-35
WP_000084338.1|4305611_4306067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023785434.1|4306063_4306669_-	DUF4376 domain-containing protein	NA	NA	NA	NA	NA
WP_001747515.1|4306673_4308419_-|tail	tail protein	tail	A0A0M3ULF6	Salmonella_phage	51.7	1.2e-51
WP_000359502.1|4308421_4309054_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	1.1e-23
WP_000951740.1|4309046_4310162_-|plate	baseplate protein	plate	Q6QI99	Burkholderia_phage	51.2	2.9e-99
WP_001093501.1|4310152_4310512_-|plate	baseplate protein	plate	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_000632050.1|4310675_4312223_-	hypothetical protein	NA	B9UDL6	Salmonella_phage	29.9	2.5e-48
WP_000703629.1|4312222_4313152_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	84.1	7.9e-151
WP_000593184.1|4313148_4313511_-	GtrA family protein	NA	U5P0S6	Shigella_phage	70.8	9.6e-44
WP_000679392.1|4313838_4314561_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	42.0	3.9e-12
WP_000818151.1|4314570_4315614_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	45.3	8.5e-77
WP_001269716.1|4315601_4315811_-	membrane protein	NA	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000271418.1|4315810_4316764_-	chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	3.9e-36
WP_001262488.1|4316763_4319118_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.6	3.1e-66
WP_001185654.1|4319214_4319343_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001003644.1|4319302_4319620_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_000907494.1|4319671_4320196_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_000729845.1|4320195_4321623_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	71.6	2.8e-195
WP_000875314.1|4321612_4321810_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449437.1|4321806_4322262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777266.1|4322420_4322735_-	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_001270445.1|4322747_4323353_-	transglycosylase SLT domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	61.0	5.9e-62
WP_001226439.1|4323355_4323643_-	membrane protein	NA	Q6QIC8	Burkholderia_phage	48.1	3.0e-16
WP_000615248.1|4324219_4324567_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
>prophage 7
NZ_CP025452	Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76340 chromosome, complete genome	4763930	4600485	4644866	4763930	tail,tRNA,integrase,transposase	Enterobacteria_phage(18.18%)	47	4626283:4626298	4642830:4642845
WP_000252549.1|4600485_4600932_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000047544.1|4601006_4601393_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_000148570.1|4601469_4601931_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_000013055.1|4601943_4602879_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	39.2	6.5e-52
WP_000249504.1|4602914_4603016_-	pyr operon leader peptide	NA	NA	NA	NA	NA
WP_001518160.1|4602995_4603136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000666051.1|4603105_4603594_-	arginine repressor	NA	NA	NA	NA	NA
WP_000514438.1|4603780_4605184_-	YfcC family protein	NA	NA	NA	NA	NA
WP_000237031.1|4605239_4606244_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000428749.1|4606355_4607288_-	carbamate kinase	NA	NA	NA	NA	NA
WP_000410847.1|4607298_4608519_-	arginine deiminase	NA	NA	NA	NA	NA
WP_000583453.1|4609194_4609647_+	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_000103041.1|4609720_4610725_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_000002940.1|4610890_4611307_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA	NA
WP_000218447.1|4611318_4612131_+|tRNA	tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE	tRNA	NA	NA	NA	NA
WP_000826193.1|4612375_4612864_-	DUF3617 domain-containing protein	NA	NA	NA	NA	NA
WP_001747736.1|4612971_4613475_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001066989.1|4613669_4614857_+	DUF898 domain-containing protein	NA	NA	NA	NA	NA
WP_000416337.1|4614998_4617854_-|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.4	9.3e-142
WP_000190703.1|4617853_4618336_-	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_000397158.1|4618433_4619945_-	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	38.7	8.3e-49
WP_000584132.1|4620338_4621439_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_001182242.1|4621438_4622521_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_001244060.1|4622716_4623715_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_001128356.1|4623778_4625098_-	gnt-II system L-idonate transporter	NA	NA	NA	NA	NA
WP_000998688.1|4625159_4625924_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_000453362.1|4625948_4626980_-	L-idonate 5-dehydrogenase	NA	NA	NA	NA	NA
4626283:4626298	attL	TTTTCTGCTTTCCAGC	NA	NA	NA	NA
WP_000896759.1|4627196_4627727_+	gluconokinase	NA	NA	NA	NA	NA
WP_000152567.1|4627754_4628774_-	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L7I1	Tupanvirus	30.5	3.9e-42
WP_000772651.1|4629245_4630508_+|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	35.6	2.8e-66
WP_001066528.1|4630538_4631177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000455466.1|4631547_4631778_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_071591111.1|4631839_4632424_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_001247004.1|4632416_4632776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001027149.1|4632807_4633092_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001075576.1|4633088_4633472_+	DUF5375 family protein	NA	NA	NA	NA	NA
WP_000211874.1|4633468_4636141_+	DUF927 domain-containing protein	NA	A0A1B0VP75	Pseudomonas_phage	34.4	2.1e-58
WP_001066192.1|4636541_4637303_+	septation initiation protein	NA	NA	NA	NA	NA
WP_001185338.1|4637302_4637575_+	ogr/Delta-like zinc finger family protein	NA	A0A2I8TV89	Erwinia_phage	46.9	6.3e-08
WP_006501160.1|4637752_4637932_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001292737.1|4637951_4638263_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	66.0	2.4e-27
WP_001747644.1|4638277_4638397_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_001280979.1|4638389_4641023_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	31.3	5.8e-106
WP_000254751.1|4642324_4642573_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_000016244.1|4642681_4642921_+	type II toxin-antitoxin system CcdA family antitoxin	NA	NA	NA	NA	NA
4642830:4642845	attR	GCTGGAAAGCAGAAAA	NA	NA	NA	NA
WP_001199743.1|4642923_4643232_+	CcdB family protein	NA	NA	NA	NA	NA
WP_096322988.1|4643611_4644866_+|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	2.2e-18
