assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_006094355.1_ASM609435v1	NZ_CP035294	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 strain ATCC 15305 chromosome, complete genome	1	279974-280071	1	CRISPRCasFinder	no		WYL,csa3,DEDDh,cas3,DinG	Orphan	TTGCATAAGAATCACTAAGGAAATT	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,Cas14u_CAS-V	NA,NA|69aa|down_5|NZ_CP035294.1_286489_286696_+	NA|107aa|up_9|NZ_CP035294.1_270344_270665_+	cd05564, PTS_IIB_chitobiose_lichenan, PTS_IIB_chitobiose_lichenan: subunit IIB of enzyme II (EII) of the N,N-diacetylchitobiose-specific and lichenan-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS)	NA|109aa|up_8|NZ_CP035294.1_270675_271002_+	pfam02255, PTS_IIA, PTS system, Lactose/Cellobiose specific IIA subunit	NA|265aa|up_7|NZ_CP035294.1_271235_272030_+	cd13711, PBP2_Ngo0372_TcyA, Substrate binding domain of ABC transporters involved in cystine import; the type 2 periplasmic binding protein fold	NA|240aa|up_6|NZ_CP035294.1_272013_272733_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|244aa|up_5|NZ_CP035294.1_272729_273461_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|306aa|up_4|NZ_CP035294.1_274414_275332_-	PRK12921, PRK12921, oxidoreductase	NA|252aa|up_3|NZ_CP035294.1_275545_276301_+	pfam02517, Abi, CAAX protease self-immunity	NA|273aa|up_2|NZ_CP035294.1_276642_277461_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|311aa|up_1|NZ_CP035294.1_277504_278437_+	cd05290, LDH_3, A subgroup of L-lactate dehydrogenases	NA|357aa|up_0|NZ_CP035294.1_278602_279673_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|430aa|down_0|NZ_CP035294.1_280078_281368_-	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|302aa|down_1|NZ_CP035294.1_281585_282491_+	cd01561, CBS_like, CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase	NA|382aa|down_2|NZ_CP035294.1_282487_283633_+	PRK07671, PRK07671, bifunctional cystathionine gamma-lyase/homocysteine desulfhydrase	NA|185aa|down_3|NZ_CP035294.1_285113_285668_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|157aa|down_4|NZ_CP035294.1_285841_286312_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|69aa|down_5|NZ_CP035294.1_286489_286696_+	NA	NA|281aa|down_6|NZ_CP035294.1_286782_287625_-	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones]	NA|205aa|down_7|NZ_CP035294.1_287625_288240_-	cd05540, UreG, urease accessory protein UreG	NA|230aa|down_8|NZ_CP035294.1_288253_288943_-	COG0830, UreF, Urease accessory protein UreF [Posttranslational modification, protein turnover, chaperones]	NA|151aa|down_9|NZ_CP035294.1_288935_289388_-	PRK13261, ureE, urease accessory protein UreE; Provisional
GCF_006094355.1_ASM609435v1	NZ_CP035296	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292 strain ATCC 15305 plasmid unnamed2, complete sequence	1	1743-1891	1	CRISPRCasFinder	no	csa3	csa3,Cas14u_CAS-V	Type I-A	GAGATTATGTATAAGTTGAAAGAAACAAAGTTTTGCAGTAACATGTTACATGT	53	1	2	1796-1838|1796-1838	NZ_CP035296.1_1319-1361|NZ_CP035296.1_1605-1647	NA	1	1	Orphan	WYL,csa3,DEDDh,cas3,DinG,Cas14u_CAS-V	NA,NA|45aa|down_2|NZ_CP035296.1_3092_3227_-	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|265aa|down_0|NZ_CP035296.1_1956_2751_+	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|67aa|down_1|NZ_CP035296.1_2756_2957_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|45aa|down_2|NZ_CP035296.1_3092_3227_-	NA	NA|295aa|down_3|NZ_CP035296.1_3240_4125_-	COG0701, COG0701, Predicted permeases [General function prediction only]	csa3|107aa|down_4|NZ_CP035296.1_4215_4536_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|65aa|down_5|NZ_CP035296.1_4585_4780_-	PRK00955, PRK00955, YgiQ family radical SAM protein	NA|116aa|down_6|NZ_CP035296.1_5064_5412_+	pfam06953, ArsD, Arsenical resistance operon trans-acting repressor ArsD	NA|577aa|down_7|NZ_CP035296.1_5392_7123_+	TIGR04291, Arsenical_pump-driving_ATPase, arsenical pump-driving ATPase	NA|555aa|down_8|NZ_CP035296.1_7119_8784_+	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	csa3|105aa|down_9|NZ_CP035296.1_8780_9095_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors
