The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	509465	519205	2825273		Streptococcus_phage(57.14%)	11	NA	NA
WP_002397890.1|509465_510104_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	53.8	4.7e-54
WP_002356367.1|510123_510453_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002384059.1|510454_511405_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	33.0	6.2e-34
WP_002356371.1|511521_512361_+	stage 0 sporulation family protein	NA	NA	NA	NA	NA
WP_002356372.1|512353_512701_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	36.7	8.1e-16
WP_078122373.1|512812_513685_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	57.6	6.2e-81
WP_002356375.1|513699_514362_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	6.7e-19
WP_002356377.1|514345_515104_+	iron export ABC transporter permease subunit FetB	NA	NA	NA	NA	NA
WP_002362328.1|515229_516348_+	DNA polymerase IV	NA	NA	NA	NA	NA
WP_002397887.1|516392_516989_-	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A0C5K925	Enterococcus_phage	56.4	7.8e-51
WP_002385686.1|517021_519205_-	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	66.8	3.1e-286
>prophage 2
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	887396	958089	2825273	terminase,tRNA,integrase,portal,tail,capsid,head,holin	Enterococcus_phage(86.79%)	79	916689:916715	957584:957610
WP_002398053.1|887396_888401_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
WP_002398054.1|888454_890233_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.2	1.5e-52
WP_002398055.1|890285_892013_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.8	4.6e-35
WP_002398056.1|892079_892895_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_104846292.1|893368_897493_+	DUF11 domain-containing protein	NA	NA	NA	NA	NA
WP_002356852.1|898031_898988_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002359877.1|898999_899923_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_078122602.1|899946_901413_+	DUF3502 domain-containing protein	NA	NA	NA	NA	NA
WP_002362905.1|901483_902119_+	DUF624 domain-containing protein	NA	NA	NA	NA	NA
WP_002398203.1|902072_903803_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_002359882.1|903814_905296_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_002364393.1|905336_907478_-	alpha-1,2-mannosidase	NA	NA	NA	NA	NA
WP_002364392.1|907650_908763_+	FUSC family protein	NA	NA	NA	NA	NA
WP_002356863.1|908806_909289_-	SRPBCC family protein	NA	NA	NA	NA	NA
WP_002356864.1|909310_909691_-	VOC family protein	NA	NA	NA	NA	NA
WP_002383776.1|909902_911369_+	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_002356866.1|911496_912501_+	nucleoid-associated protein	NA	A0A090D855	Clostridium_phage	22.3	8.6e-10
WP_002398205.1|912538_912892_-	YxeA family protein	NA	NA	NA	NA	NA
WP_002383773.1|913090_913795_+	zinc metallopeptidase	NA	NA	NA	NA	NA
WP_002356871.1|913878_914217_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002372093.1|914243_915089_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
WP_002383772.1|915145_915997_-	Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_002362126.1|916074_916596_+	nucleoside deaminase	NA	NA	NA	NA	NA
916689:916715	attL	ACTAAGCAAGTGCCGCCATGTGTCTGA	NA	NA	NA	NA
WP_002405155.1|916789_917926_-|integrase	site-specific integrase	integrase	A0A0S2MYI6	Enterococcus_phage	100.0	2.9e-211
WP_010776364.1|917992_918565_-	hypothetical protein	NA	A0A1B1UZZ9	Enterococcus_phage	100.0	9.4e-86
WP_002389192.1|918625_918826_-	hypothetical protein	NA	A0A0S2MYA2	Enterococcus_phage	100.0	7.4e-30
WP_002404917.1|918849_919551_-	DUF5067 domain-containing protein	NA	A0A0S2MYA9	Enterococcus_phage	100.0	5.5e-96
WP_002381617.1|919639_920113_-	hypothetical protein	NA	A0A0S2MYA6	Enterococcus_phage	100.0	5.4e-87
WP_002404919.1|920129_920702_-	helix-turn-helix domain-containing protein	NA	C9E2M1	Enterococcus_phage	98.9	7.4e-99
WP_002389146.1|920860_921094_+	DUF739 family protein	NA	A0A0S2MYC3	Enterococcus_phage	100.0	7.8e-39
WP_002404920.1|921175_921895_+	oxidoreductase	NA	A0A0S2MYI3	Enterococcus_phage	100.0	2.3e-134
WP_002389279.1|921910_922159_+	hypothetical protein	NA	A0A0S2MYC6	Enterococcus_phage	100.0	2.1e-42
WP_002389004.1|922673_922910_+	hypothetical protein	NA	A0A0S2MYD6	Enterococcus_phage	100.0	6.2e-36
WP_002404924.1|922910_923588_+	ERF family protein	NA	A0A0S2MYH3	Enterococcus_phage	100.0	3.3e-122
WP_002404925.1|923572_924511_+	DUF1351 domain-containing protein	NA	A0A0S2MYB3	Enterococcus_phage	99.7	1.1e-123
WP_002404926.1|924507_925188_+	hypothetical protein	NA	A0A0S2MYA3	Enterococcus_phage	100.0	4.8e-129
WP_010776362.1|925191_926220_+	hypothetical protein	NA	A0A0S2MYA8	Enterococcus_phage	99.3	2.9e-162
WP_002381633.1|926219_926528_+	hypothetical protein	NA	D2IZR4	Enterococcus_phage	90.9	1.6e-44
WP_010776361.1|926517_927045_+	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	58.3	9.0e-43
WP_078122599.1|927056_927386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025190349.1|927405_927612_+	hypothetical protein	NA	A0A1B1V001	Enterococcus_phage	90.3	5.3e-23
WP_078122598.1|927665_928148_+	class I SAM-dependent methyltransferase	NA	D2IYU6	Enterococcus_phage	96.8	4.5e-89
WP_010712230.1|928341_928521_+	hypothetical protein	NA	D2IZY7	Enterococcus_phage	96.6	9.8e-26
WP_078122622.1|928620_928905_+	hypothetical protein	NA	S6CQM6	Streptococcus_phage	77.1	1.1e-23
WP_078122597.1|928904_929129_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078122596.1|929143_929380_+	hypothetical protein	NA	A0A096XT77	Enterococcus_phage	43.6	2.2e-09
WP_089201922.1|929385_929709_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_078122594.1|929705_929957_+	hypothetical protein	NA	A0A0Y0C5A8	Bacillus_phage	39.0	7.9e-05
WP_074653948.1|929968_930208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_078122593.1|930210_930702_+	DUF1642 domain-containing protein	NA	D2IZZ0	Enterococcus_phage	37.5	9.4e-18
WP_002357362.1|931456_931873_+	autolysin	NA	D2IZL7	Enterococcus_phage	99.3	1.7e-68
WP_002404957.1|933730_934525_+|terminase	small subunit of terminase	terminase	D2J000	Enterococcus_phage	91.8	5.6e-121
WP_138807301.1|934496_935816_+|terminase	PBSX family phage terminase large subunit	terminase	D2J001	Enterococcus_phage	91.8	5.5e-230
WP_002404959.1|935833_937372_+|portal	phage portal protein	portal	A0A1B1V003	Enterococcus_phage	99.8	1.9e-287
WP_002404960.1|937376_938315_+|capsid	minor capsid protein	capsid	A0A0S2MYG5	Enterococcus_phage	100.0	9.7e-173
WP_002404961.1|938315_938585_+	hypothetical protein	NA	A0A0S2MYD1	Enterococcus_phage	100.0	3.8e-45
WP_025188184.1|938679_938943_+	hypothetical protein	NA	A0A0S2MYE7	Enterococcus_phage	100.0	4.1e-44
WP_002404963.1|939065_939665_+	DUF4355 domain-containing protein	NA	A0A0S2MYF0	Enterococcus_phage	100.0	3.5e-75
WP_002404964.1|939677_940610_+|capsid	phage major capsid protein	capsid	A0A1B1V000	Enterococcus_phage	100.0	2.3e-174
WP_002404965.1|940683_941016_+|head,tail	phage head-tail connector protein	head,tail	A0A0S2MYD5	Enterococcus_phage	100.0	5.5e-54
WP_002404966.1|941012_941348_+	hypothetical protein	NA	A0A0S2MYE1	Enterococcus_phage	100.0	1.1e-57
WP_002402384.1|941322_941703_+	hypothetical protein	NA	A0A0S2MYE9	Enterococcus_phage	100.0	2.1e-65
WP_002404967.1|941699_942089_+	hypothetical protein	NA	A0A0S2MYG3	Enterococcus_phage	100.0	2.3e-67
WP_002404968.1|942104_942635_+|tail	phage major tail protein, TP901-1 family	tail	A0A0S2MYF4	Enterococcus_phage	100.0	1.5e-93
WP_002404969.1|942712_943171_+	hypothetical protein	NA	A0A0S2MYH7	Enterococcus_phage	100.0	3.7e-77
WP_002404970.1|943226_943577_+	hypothetical protein	NA	A0A0S2MYH5	Enterococcus_phage	100.0	2.5e-57
WP_002404971.1|943669_943927_+	hypothetical protein	NA	A0A0S2MYH1	Enterococcus_phage	100.0	1.6e-40
WP_010776350.1|943942_947350_+	tape measure protein	NA	A0A0S2MYN1	Enterococcus_phage	100.0	0.0e+00
WP_002373078.1|947350_948280_+|tail	tail protein	tail	A0A097BY64	Enterococcus_phage	99.4	8.1e-172
WP_002404973.1|948296_950315_+	phage minor structural protein, region	NA	A0A0S2MYF5	Enterococcus_phage	100.0	1.4e-309
WP_078122592.1|950494_952885_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	99.9	0.0e+00
WP_002381665.1|952976_953204_+	hypothetical protein	NA	A0A0S2MYL7	Enterococcus_phage	98.6	1.3e-30
WP_002369080.1|953200_953404_+|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	100.0	2.6e-30
WP_002404976.1|953408_954668_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A0S2MYF3	Enterococcus_phage	97.6	1.5e-237
WP_002404977.1|954769_955366_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002404978.1|955377_955767_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002404979.1|956068_957031_+	Abi-like protein	NA	A0A0S2MYH0	Enterococcus_phage	100.0	3.1e-182
WP_002404980.1|957126_957375_-	hypothetical protein	NA	A0A0S2MYI8	Enterococcus_phage	100.0	1.6e-37
WP_002356881.1|957708_958089_-	PH domain-containing protein	NA	A6N235	Microbacterium_phage	33.0	2.5e-10
957584:957610	attR	ACTAAGCAAGTGCCGCCATGTGTCTGA	NA	NA	NA	NA
>prophage 3
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	1038880	1117508	2825273	terminase,plate,tRNA,integrase,portal,tail,capsid,head,protease,holin	Enterococcus_phage(21.43%)	86	1068355:1068373	1102087:1102105
WP_002398071.1|1038880_1040005_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_002356962.1|1040184_1041423_-	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_002425753.1|1041439_1041955_-	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_002364252.1|1042087_1042657_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356966.1|1042754_1043120_+	DUF1033 family protein	NA	NA	NA	NA	NA
WP_002362072.1|1043250_1045332_+	DNA topoisomerase III	NA	NA	NA	NA	NA
WP_002398073.1|1045416_1046280_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002356974.1|1047144_1048563_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_002356976.1|1048559_1049573_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_002364369.1|1049577_1051311_+	thiol reductant ABC exporter subunit CydD	NA	A0A2H4UU96	Bodo_saltans_virus	24.3	6.5e-13
WP_002364246.1|1051307_1053074_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.8	1.6e-22
WP_002360015.1|1053153_1054134_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_002360016.1|1054255_1055161_+	prenyltransferase	NA	NA	NA	NA	NA
WP_002360017.1|1055189_1056401_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002364367.1|1056714_1059138_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.0	2.2e-83
WP_002356983.1|1059267_1059969_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002381711.1|1060086_1060836_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.5	1.9e-33
WP_138807092.1|1060825_1062655_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_002356987.1|1062781_1063855_+	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
WP_002360022.1|1064144_1065473_+	amino acid permease	NA	NA	NA	NA	NA
WP_002398077.1|1065714_1066683_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA	NA
WP_002369171.1|1066639_1067686_+	secretion system protein F	NA	NA	NA	NA	NA
WP_002356991.1|1067685_1067961_+	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_138807094.1|1067957_1068395_+	hypothetical protein	NA	NA	NA	NA	NA
1068355:1068373	attL	AATTTCAGATGGGGAGTGG	NA	NA	NA	NA
WP_138807096.1|1068428_1069577_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1C8E994	Bacillus_phage	30.7	1.3e-38
WP_138807098.1|1069673_1070402_-	ion transporter	NA	A0A1B0Y2S3	Lactobacillus_phage	48.4	2.4e-22
WP_002395798.1|1070435_1070780_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A097QQ08	Enterococcus_phage	73.7	5.9e-43
WP_002395799.1|1070797_1071184_-	helix-turn-helix transcriptional regulator	NA	A0A097QQ00	Enterococcus_phage	98.3	7.8e-60
WP_002364354.1|1071431_1071608_+	helix-turn-helix transcriptional regulator	NA	D2IZW2	Enterococcus_phage	65.5	1.7e-14
WP_002381719.1|1071618_1071930_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002395800.1|1071936_1072116_+	hypothetical protein	NA	A0A0S2MY96	Enterococcus_phage	78.6	4.9e-17
WP_105194762.1|1072747_1072948_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010826715.1|1072944_1073238_+	VRR-NUC domain-containing protein	NA	A0A2H4J095	uncultured_Caudovirales_phage	44.2	3.6e-09
WP_016626781.1|1073227_1074424_+	DEAD/DEAH box helicase	NA	A0A1X9IH01	Staphylococcus_phage	25.3	3.8e-20
WP_010826713.1|1074425_1074668_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138807100.1|1074680_1075592_+	endonuclease	NA	A0A2H4JA52	uncultured_Caudovirales_phage	27.9	2.9e-12
WP_002407623.1|1075593_1075812_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104858190.1|1075828_1076353_+	hypothetical protein	NA	D7PQ37	Enterococcus_phage	51.4	2.8e-20
WP_128722480.1|1076330_1077251_+	AAA family ATPase	NA	A0A0A1ENB5	Lactobacillus_phage	57.3	4.9e-76
WP_138807102.1|1077301_1077814_+	hypothetical protein	NA	A0A0A1ELK1	Lactobacillus_phage	36.9	4.5e-23
WP_105194765.1|1077836_1079399_+	hypothetical protein	NA	A0A1B1P7M5	Bacillus_phage	28.8	4.9e-44
WP_162301521.1|1079395_1080148_-	DUF4145 domain-containing protein	NA	M1PSB6	Streptococcus_phage	37.6	8.4e-18
WP_105194767.1|1080223_1082077_+	DNA primase	NA	H7BVJ4	unidentified_phage	26.0	4.6e-41
WP_033591994.1|1082456_1082801_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1J0MFD1	Staphylococcus_phage	36.2	9.8e-14
WP_138807104.1|1082932_1083334_+	hypothetical protein	NA	A0A1B1P7N8	Bacillus_phage	41.6	3.3e-13
WP_002393035.1|1083333_1083702_+	HNH endonuclease	NA	A0A1B0T6C5	Bacillus_phage	62.6	6.3e-43
WP_105194768.1|1083814_1084267_+|terminase	terminase small subunit	terminase	A0A2H4JFK0	uncultured_Caudovirales_phage	69.2	2.7e-48
WP_105194769.1|1084263_1085991_+|terminase	terminase large subunit	terminase	A0A2H4JDG5	uncultured_Caudovirales_phage	70.7	8.4e-255
WP_138807106.1|1086009_1087221_+|portal	phage portal protein	portal	A0A2H4J9C7	uncultured_Caudovirales_phage	67.2	2.8e-148
WP_002393031.1|1087207_1087780_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4J6Z9	uncultured_Caudovirales_phage	61.9	2.7e-61
WP_105194770.1|1087791_1089153_+|capsid	phage major capsid protein	capsid	A0A1B2APY9	Phage_Wrath	66.6	2.7e-123
WP_002395304.1|1089155_1089437_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1B1P7M9	Bacillus_phage	58.0	1.5e-20
WP_002373974.1|1089414_1089741_+|head	phage head closure protein	head	A0A0N7IRA3	Lactobacillus_phage	54.4	1.2e-21
WP_002398474.1|1089730_1090069_+	hypothetical protein	NA	A0A1B0T6B7	Bacillus_phage	53.2	6.4e-26
WP_105194771.1|1090058_1090421_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
WP_105194772.1|1090417_1091065_+|tail	phage tail protein	tail	A0A2H4JGN2	uncultured_Caudovirales_phage	34.0	1.3e-27
WP_002395308.1|1091064_1091520_+	hypothetical protein	NA	A0A2H4J956	uncultured_Caudovirales_phage	35.1	1.7e-13
WP_138807108.1|1091711_1094015_+|tail	phage tail tape measure protein	tail	V5UPR9	Enterococcus_phage	51.4	6.3e-72
WP_162301522.1|1094011_1094725_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_138807110.1|1094721_1097517_+	CHAP domain-containing protein	NA	D7RWE0	Brochothrix_phage	37.5	7.6e-64
WP_138807112.1|1097535_1098417_+|plate	BppU family phage baseplate upper protein	plate	Q9AYV5	Lactococcus_phage	27.3	1.1e-11
WP_138807114.1|1098409_1099006_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002365086.1|1099002_1099290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138807116.1|1099289_1099799_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002402192.1|1099815_1100190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002399193.1|1100189_1100327_+	XkdX family protein	NA	NA	NA	NA	NA
WP_002383824.1|1100360_1100594_+|holin	holin	holin	D2J075	Enterococcus_phage	69.0	1.2e-23
WP_010784051.1|1100596_1100803_+|holin	holin	holin	A0A0S2MYF6	Enterococcus_phage	97.0	1.3e-29
WP_138807118.1|1100805_1101906_+	N-acetylmuramoyl-L-alanine amidase	NA	V5URN7	Enterococcus_phage	46.4	1.2e-84
WP_002425755.1|1102101_1102428_+	type II secretion system protein	NA	NA	NA	NA	NA
1102087:1102105	attR	AATTTCAGATGGGGAGTGG	NA	NA	NA	NA
WP_002398461.1|1102417_1102852_+	ComGF family competence protein	NA	NA	NA	NA	NA
WP_002360027.1|1102851_1103205_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138807122.1|1103333_1104341_+	N-6 DNA methylase	NA	NA	NA	NA	NA
WP_002398460.1|1104365_1105553_+	acetate kinase	NA	NA	NA	NA	NA
WP_002383133.1|1105664_1106171_-	universal stress protein	NA	NA	NA	NA	NA
WP_002357068.1|1106315_1106648_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360030.1|1106921_1108199_-	replication-associated recombination protein A	NA	A0A127AWE7	Bacillus_phage	49.9	1.8e-105
WP_010717036.1|1108327_1109005_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
WP_002398458.1|1108952_1109447_+	DUF3013 family protein	NA	NA	NA	NA	NA
WP_002357075.1|1109462_1110410_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_002357078.1|1110411_1111164_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_002357079.1|1111378_1113592_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.0	1.3e-10
WP_002357080.1|1113615_1114062_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_002383130.1|1114201_1114423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002362049.1|1114419_1115721_+|tRNA	histidine--tRNA ligase	tRNA	A0A2I2L577	Orpheovirus	26.8	8.8e-23
WP_002360034.1|1115738_1117508_+|tRNA	aspartate--tRNA ligase	tRNA	A0A2K9L424	Tupanvirus	30.3	3.0e-13
>prophage 4
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	1267425	1276069	2825273		Synechococcus_phage(50.0%)	9	NA	NA
WP_002357268.1|1267425_1267914_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.7	7.6e-20
WP_002371924.1|1267906_1269031_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_002398358.1|1269182_1269896_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3ELR0	Synechococcus_phage	42.5	9.7e-48
WP_002357271.1|1269909_1270161_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_002374675.1|1270161_1270836_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_127341785.1|1270832_1273052_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.9	5.7e-147
WP_127341784.1|1273027_1274467_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.1	2.1e-49
WP_002398355.1|1274468_1275500_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	M4QRQ6	Synechococcus_phage	45.2	1.1e-55
WP_002374681.1|1275496_1276069_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.1	5.4e-25
>prophage 5
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	1398543	1435539	2825273	transposase	Streptococcus_phage(64.71%)	34	NA	NA
WP_010710319.1|1398543_1398858_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	52.4	6.6e-25
WP_010710320.1|1398870_1399245_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	60.9	5.4e-34
WP_033591428.1|1399254_1399590_+	damage-inducible protein J	NA	NA	NA	NA	NA
WP_138807178.1|1399658_1401026_+	DUF87 domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	65.1	5.1e-162
WP_138807180.1|1401070_1402213_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SEK0	Streptococcus_phage	65.4	1.0e-123
WP_010818847.1|1402202_1402493_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138807182.1|1402748_1403933_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	62.1	2.0e-143
WP_002335932.1|1403947_1404067_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_002298822.1|1404071_1404293_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	87.7	4.5e-28
WP_138807184.1|1404868_1405258_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	65.9	2.5e-42
WP_138807187.1|1406689_1408813_+	FUSC family protein	NA	A0A1S5SF30	Streptococcus_phage	59.0	7.1e-179
WP_073357662.1|1408809_1409814_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	62.6	4.0e-116
WP_010710331.1|1409832_1410738_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	43.6	4.6e-63
WP_138807189.1|1412116_1413286_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_138807191.1|1413394_1414585_-|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
WP_010710335.1|1414761_1415541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010818839.1|1415586_1416531_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010710337.1|1416546_1417326_+	LPS biosynthesis protein	NA	NA	NA	NA	NA
WP_010710338.1|1417337_1418036_+	CpsD/CapB family tyrosine-protein kinase	NA	A0A1X9I5D6	Streptococcus_phage	37.6	1.6e-26
WP_138807193.1|1418063_1418828_+	tyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_138807195.1|1418840_1420658_+	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	31.8	1.7e-27
WP_138807197.1|1420641_1421283_+	sugar transferase	NA	NA	NA	NA	NA
WP_138807200.1|1421279_1422128_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
WP_138807202.1|1422124_1423276_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_138807204.1|1423437_1424520_+	EpsG family protein	NA	NA	NA	NA	NA
WP_073506267.1|1424638_1425454_+	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	40.7	1.4e-10
WP_138807208.1|1425508_1426678_+	nucleotide sugar dehydrogenase	NA	M1HV26	Paramecium_bursaria_Chlorella_virus	49.6	1.3e-102
WP_138807210.1|1426681_1428094_+	oligosaccharide flippase family protein	NA	NA	NA	NA	NA
WP_138807212.1|1428343_1429505_+|transposase	IS3 family transposase	transposase	A0A2I7SC85	Paenibacillus_phage	54.2	3.2e-80
WP_138807214.1|1429753_1429954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010710357.1|1429943_1430300_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_010710358.1|1430405_1431950_+|transposase	IS66 family transposase	transposase	NA	NA	NA	NA
WP_138807216.1|1431991_1433188_+|transposase	IS21 family transposase	transposase	A0A059NT83	Lactococcus_phage	52.6	2.1e-103
WP_010710361.1|1434024_1435539_+|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	39.4	1.2e-50
>prophage 6
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	1754843	1769470	2825273	tail,holin	Enterococcus_phage(50.0%)	16	NA	NA
WP_002398986.1|1754843_1755968_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A139ZVY1	Enterococcus_phage	43.8	6.6e-75
WP_002357842.1|1756086_1756482_-|holin	phage holin family protein	holin	F0PIJ6	Enterococcus_phage	48.9	2.8e-33
WP_002365555.1|1756505_1758275_-	hypothetical protein	NA	A0A097BYA8	Enterococcus_phage	64.3	8.0e-144
WP_002365554.1|1758307_1759765_-	phage minor structural protein	NA	C9E2K6	Enterococcus_phage	48.0	6.6e-176
WP_002365553.1|1759777_1760704_-|tail	phage tail family protein	tail	C9E2K5	Enterococcus_phage	78.6	9.0e-147
WP_138807241.1|1760705_1763639_-	hypothetical protein	NA	A0A1U9WR55	Streptococcus_virus	25.0	1.9e-09
WP_002382238.1|1763628_1763922_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002357848.1|1764014_1764374_-	hypothetical protein	NA	A0A0F6N4J9	Staphylococcus_phage	32.2	7.6e-09
WP_002365550.1|1764406_1764919_-|tail	phage major tail protein, TP901-1 family	tail	W6LP72	Streptococcus_phage	49.4	8.8e-35
WP_002398212.1|1764931_1765348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002360491.1|1765568_1765976_-	RinA family phage transcriptional activator	NA	NA	NA	NA	NA
WP_002363798.1|1765995_1766388_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002365547.1|1766454_1767297_-	ATP-binding protein	NA	A0A0P0I3L9	Lactobacillus_phage	30.7	6.3e-30
WP_002393201.1|1767315_1768071_-	DnaD domain protein	NA	A0A0K0MX39	Streptococcus_phage	56.0	8.7e-31
WP_002360496.1|1768467_1768950_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	47.7	2.6e-20
WP_002382232.1|1768984_1769470_+	toxin	NA	A0A097BY56	Enterococcus_phage	70.5	4.4e-60
>prophage 7
NZ_CP030042	Enterococcus faecalis strain C25 chromosome, complete genome	2825273	2129549	2137463	2825273		uncultured_Caudovirales_phage(16.67%)	11	NA	NA
WP_138807273.1|2129549_2130725_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	47.7	5.6e-85
WP_002361365.1|2130740_2131256_-	GrpB family protein	NA	A0A2K5B2B6	Erysipelothrix_phage	48.8	7.7e-39
WP_162301534.1|2131273_2131768_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002370721.1|2131835_2132195_-	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
WP_002397944.1|2132262_2132643_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002355799.1|2132688_2133048_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002355798.1|2133108_2133309_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_002355797.1|2133422_2133944_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	33.3	3.0e-14
WP_002355796.1|2134343_2135414_-	helix-turn-helix domain-containing protein	NA	A0A288TXV8	Enterococcus_phage	49.0	7.6e-89
WP_002361357.1|2135454_2136411_-	ATP-binding cassette domain-containing protein	NA	A0A1J0FA64	Only_Syngen_Nebraska_virus	23.9	4.2e-06
WP_002364714.1|2136410_2137463_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.1	2.0e-17
