assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005944105.1_ASM594410v1	NZ_CP040719	Rhodococcus pyridinivorans strain YF3 chromosome, complete genome	1	212831-212946	1	CRISPRCasFinder	no		cas3,c2c9_V-U4,WYL,DEDDh,DinG,cas4,Cas9_archaeal,csa3	Orphan	CCGTACTGAGGAGCGCCGAACTGGGG	26	0	0	NA	NA	NA	2	2	Orphan	cas3,c2c9_V-U4,WYL,DEDDh,DinG,cas4,Cas9_archaeal,csa3	NA,NA|88aa|down_7|NZ_CP040719.1_220868_221132_-,NA|477aa|down_9|NZ_CP040719.1_223166_224597_+	NA|630aa|up_9|NZ_CP040719.1_199874_201764_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|346aa|up_8|NZ_CP040719.1_201907_202945_+	pfam12802, MarR_2, MarR family	NA|294aa|up_7|NZ_CP040719.1_203025_203907_-	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator	NA|201aa|up_6|NZ_CP040719.1_203979_204582_+	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|300aa|up_5|NZ_CP040719.1_204586_205486_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|140aa|up_4|NZ_CP040719.1_205489_205909_-	pfam12900, Pyridox_ox_2, Pyridoxamine 5'-phosphate oxidase	NA|914aa|up_3|NZ_CP040719.1_206057_208799_+	cd02089, P-type_ATPase_Ca_prok, prokaryotic P-type Ca(2+)-ATPase similar to Synechococcus elongatus sp	NA|413aa|up_2|NZ_CP040719.1_208960_210199_+	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|415aa|up_1|NZ_CP040719.1_210210_211455_+	PRK00112, tgt, queuine tRNA-ribosyltransferase; Provisional	NA|244aa|up_0|NZ_CP040719.1_211474_212206_-	pfam02592, Vut_1, Putative vitamin uptake transporter	NA|311aa|down_0|NZ_CP040719.1_214206_215139_-	PRK05710, PRK05710, tRNA glutamyl-Q(34) synthetase GluQRS	NA|300aa|down_1|NZ_CP040719.1_215148_216048_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|463aa|down_2|NZ_CP040719.1_216171_217560_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|246aa|down_3|NZ_CP040719.1_217556_218294_+	TIGR01963, D-beta-hydroxybutyrate_dehydrogenase, 3-hydroxybutyrate dehydrogenase	NA|195aa|down_4|NZ_CP040719.1_218347_218932_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|222aa|down_5|NZ_CP040719.1_218985_219651_-	pfam06912, DUF1275, Protein of unknown function (DUF1275)	NA|368aa|down_6|NZ_CP040719.1_219741_220845_+	pfam07510, DUF1524, Protein of unknown function (DUF1524)	NA|88aa|down_7|NZ_CP040719.1_220868_221132_-	NA	NA|431aa|down_8|NZ_CP040719.1_221564_222857_+	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase	NA|477aa|down_9|NZ_CP040719.1_223166_224597_+	NA
GCF_005944105.1_ASM594410v1	NZ_CP040720	Rhodococcus pyridinivorans strain YF3 plasmid unnamed1, complete sequence	1	171638-171855	1	CRISPRCasFinder	no		csa3	Orphan	TCGACACCGACGGGGACGGCCGG	23	0	0	NA	NA	NA	5	5	Orphan	cas3,c2c9_V-U4,WYL,DEDDh,DinG,cas4,Cas9_archaeal,csa3	NA|105aa|up_9|NZ_CP040720.1_163828_164143_-,NA|535aa|up_7|NZ_CP040720.1_164650_166255_+,NA|104aa|up_6|NZ_CP040720.1_166656_166968_-,NA|135aa|up_5|NZ_CP040720.1_167060_167465_-,NA|105aa|up_4|NZ_CP040720.1_167583_167898_-,NA|79aa|up_1|NZ_CP040720.1_169887_170124_-,NA|86aa|up_0|NZ_CP040720.1_170292_170550_-,NA|421aa|down_1|NZ_CP040720.1_174362_175625_+,NA|106aa|down_2|NZ_CP040720.1_175614_175932_+,NA|140aa|down_4|NZ_CP040720.1_178656_179076_-,NA|93aa|down_9|NZ_CP040720.1_184594_184873_-	NA|105aa|up_9|NZ_CP040720.1_163828_164143_-	NA	NA|87aa|up_8|NZ_CP040720.1_164269_164530_-	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3	NA|535aa|up_7|NZ_CP040720.1_164650_166255_+	NA	NA|104aa|up_6|NZ_CP040720.1_166656_166968_-	NA	NA|135aa|up_5|NZ_CP040720.1_167060_167465_-	NA	NA|105aa|up_4|NZ_CP040720.1_167583_167898_-	NA	NA|147aa|up_3|NZ_CP040720.1_168023_168464_-	cd04673, Nudix_Hydrolase_15, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|151aa|up_2|NZ_CP040720.1_168577_169030_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|79aa|up_1|NZ_CP040720.1_169887_170124_-	NA	NA|86aa|up_0|NZ_CP040720.1_170292_170550_-	NA	NA|106aa|down_0|NZ_CP040720.1_172044_172362_+	pfam01025, GrpE, GrpE	NA|421aa|down_1|NZ_CP040720.1_174362_175625_+	NA	NA|106aa|down_2|NZ_CP040720.1_175614_175932_+	NA	NA|407aa|down_3|NZ_CP040720.1_176439_177659_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|140aa|down_4|NZ_CP040720.1_178656_179076_-	NA	NA|276aa|down_5|NZ_CP040720.1_179370_180198_-	cd07326, M56_BlaR1_MecR1_like, Peptidase M56-like including those in BlaR1 and MecR1, integral membrane metallopeptidase	NA|121aa|down_6|NZ_CP040720.1_180296_180659_-	pfam03965, Penicillinase_R, Penicillinase repressor	NA|356aa|down_7|NZ_CP040720.1_180933_182001_-	PRK04207, PRK04207, type II glyceraldehyde-3-phosphate dehydrogenase	NA|814aa|down_8|NZ_CP040720.1_182068_184510_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|93aa|down_9|NZ_CP040720.1_184594_184873_-	NA
