The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	708232	716052	2763777		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|708232_709288_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|709287_709974_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037805.1|709948_710422_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093557.1|710762_711203_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000637685.1|711483_712068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062968.1|712166_712880_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|712883_713303_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|713304_713973_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604516.1|714323_714917_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	44.0	3.1e-39
WP_001217786.1|714900_716052_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	36.1	2.1e-23
>prophage 2
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	728022	742338	2763777		uncultured_Caudovirales_phage(50.0%)	15	NA	NA
WP_000663034.1|728022_729081_+	histidinol-phosphate transaminase	NA	A0A0H3TLT9	Faustovirus	26.9	1.5e-20
WP_001825709.1|730082_730250_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000429003.1|730518_731436_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.8e-07
WP_014936998.1|731526_731634_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193750.1|731705_733211_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_071938133.1|733272_733479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000930016.1|733550_734051_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	66.2	2.7e-52
WP_138766939.1|734070_734937_-	EamA family transporter	NA	NA	NA	NA	NA
WP_078064764.1|735321_735471_+	ribonucleoside-diphosphate reductase	NA	NA	NA	NA	NA
WP_000692521.1|735738_736137_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855505.1|736099_738205_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|738324_739296_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000876311.1|739665_740637_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	80.2	7.8e-141
WP_001245567.1|740623_741580_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.6e-05
WP_000616865.1|741576_742338_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	30.1	7.2e-17
>prophage 3
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	985703	994176	2763777		Synechococcus_phage(33.33%)	9	NA	NA
WP_001807816.1|985703_986186_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010409.1|986172_987297_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174055.1|987300_988005_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	2.1e-47
WP_000848351.1|988004_988268_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666799.1|988269_988941_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032750.1|988933_991123_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.4	1.3e-140
WP_000483707.1|991101_992586_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	8.5e-46
WP_000030815.1|992578_993607_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.1	2.9e-61
WP_000238668.1|993609_994176_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	2.7e-29
>prophage 4
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	1228219	1300437	2763777	protease,tail,transposase,holin,portal,head,integrase,tRNA,capsid	Staphylococcus_phage(90.67%)	94	1239881:1239896	1248743:1248758
WP_000121214.1|1228219_1229167_+|transposase	IS30-like element ISSau1 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	99.7	1.9e-184
WP_000655666.1|1229205_1229499_+	thiamine-binding protein	NA	NA	NA	NA	NA
WP_001001522.1|1229632_1231177_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_000282384.1|1231177_1231543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000842283.1|1231569_1232061_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA	NA
WP_000073346.1|1232363_1234982_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.7	1.9e-40
WP_000516257.1|1234994_1237004_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	29.5	5.3e-59
WP_001072706.1|1237009_1237552_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_138766965.1|1238026_1238845_+	MIP family channel protein	NA	M1H4F4	Acanthocystis_turfacea_Chlorella_virus	35.1	3.1e-26
WP_000417370.1|1238973_1240470_+	glycerol kinase GlpK	NA	NA	NA	NA	NA
1239881:1239896	attL	GTTCAATCTTTGTTTC	NA	NA	NA	NA
WP_001218598.1|1240627_1242301_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA	NA
WP_000857185.1|1242932_1243970_-|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	100.0	4.5e-179
WP_001549185.1|1244161_1244875_-	toxin MazF	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000694772.1|1244953_1245136_-	hypothetical protein	NA	A0A2I6PDF8	Staphylococcus_phage	100.0	6.9e-27
WP_031896415.1|1245339_1245681_-	hypothetical protein	NA	A0A2I6PF04	Staphylococcus_phage	99.1	6.0e-56
WP_138766966.1|1245686_1246619_-	ATP-dependent helicase	NA	A0A2I6PEZ7	Staphylococcus_phage	99.7	7.4e-173
WP_001031454.1|1246634_1247348_-	helix-turn-helix transcriptional regulator	NA	M9NUL0	Staphylococcus_phage	100.0	1.2e-130
WP_031929273.1|1247310_1247484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000854072.1|1247480_1247744_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PF09	Staphylococcus_phage	100.0	7.2e-41
WP_001025404.1|1247759_1247975_+	DUF2829 domain-containing protein	NA	A0A0H3U4C7	Staphylococcus_phage	100.0	4.8e-35
WP_000128907.1|1247963_1248293_-	hypothetical protein	NA	M9NS98	Staphylococcus_phage	100.0	2.7e-53
WP_001148605.1|1248343_1249096_+	oxidoreductase	NA	M9NTH5	Staphylococcus_phage	100.0	1.1e-139
1248743:1248758	attR	GAAACAAAGATTGAAC	NA	NA	NA	NA
WP_001148862.1|1249111_1249309_+	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_000762521.1|1249295_1249676_-	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001120201.1|1249730_1250054_+	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000048129.1|1250050_1250212_+	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|1250306_1250609_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|1250613_1250874_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|1250882_1251146_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_031896414.1|1251154_1253098_+	AAA family ATPase	NA	S4V9K6	Staphylococcus_phage	99.5	0.0e+00
WP_000138475.1|1253099_1254020_+	recombinase	NA	A0A2I6PDH5	Staphylococcus_phage	100.0	2.3e-166
WP_071621397.1|1254100_1254718_+	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000934760.1|1254718_1255189_+	single-stranded DNA-binding protein	NA	A0EWX3	Staphylococcus_phage	99.4	7.4e-81
WP_031833239.1|1255218_1256103_+	DnaD domain protein	NA	A0A1W6JPN9	Staphylococcus_phage	100.0	1.7e-139
WP_000338527.1|1256109_1256328_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	98.6	4.0e-37
WP_000401965.1|1256336_1256792_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A1P8L6F2	Staphylococcus_phage	99.3	5.9e-83
WP_000101275.1|1256804_1257173_+	hypothetical protein	NA	I1W656	Staphylococcus_phage	100.0	6.3e-51
WP_000131384.1|1257176_1257419_+	hypothetical protein	NA	M1T302	Staphylococcus_phage	97.5	2.5e-40
WP_031875643.1|1257432_1257687_+	DUF1024 family protein	NA	A0A2I6PE79	Staphylococcus_phage	98.8	6.5e-39
WP_001066447.1|1257836_1258373_+	hypothetical protein	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
WP_001282074.1|1258409_1258655_+	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_000195803.1|1258651_1258858_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592207.1|1258854_1259241_+	hypothetical protein	NA	W5R986	Staphylococcus_phage	100.0	3.0e-64
WP_000595265.1|1259237_1259387_+	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000265043.1|1259386_1259587_+	DUF1514 family protein	NA	A0A2I6PDV9	Staphylococcus_phage	100.0	1.4e-28
WP_000590122.1|1259614_1260031_+	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_000988336.1|1260262_1260562_+	HNH endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
WP_000402904.1|1260691_1261036_+	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000025274.1|1262708_1263896_+|portal	phage portal protein	portal	A0A2I6PDI1	Staphylococcus_phage	100.0	1.0e-219
WP_000642728.1|1263879_1264617_+|protease	Clp protease ClpP	protease	G4KNQ2	Staphylococcus_phage	100.0	1.8e-129
WP_138766967.1|1264640_1265786_+|capsid	phage major capsid protein	capsid	G4KNQ3	Staphylococcus_phage	99.7	6.2e-214
WP_138766968.1|1265805_1266066_+	hypothetical protein	NA	A0A0H3U504	Staphylococcus_phage	98.8	5.4e-41
WP_000150936.1|1266078_1266363_+|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000755150.1|1266346_1266709_+|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_138766969.1|1266705_1267110_+	hypothetical protein	NA	G4KNQ5	Staphylococcus_phage	98.5	4.8e-68
WP_000565498.1|1267106_1267514_+	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000268740.1|1267514_1268159_+|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	100.0	6.5e-120
WP_071621395.1|1268200_1268425_+	hypothetical protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_001096355.1|1268474_1268825_+	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_061819789.1|1269069_1273614_+|tail	phage tail tape measure protein	tail	A0A075M036	Staphylococcus_phage	98.6	0.0e+00
WP_000567408.1|1273610_1275095_+|tail	phage tail protein	tail	A0A2I6PDJ0	Staphylococcus_phage	100.0	1.2e-297
WP_138766970.1|1275110_1278893_+	hypothetical protein	NA	A0A068A201	Staphylococcus_phage	99.0	0.0e+00
WP_001000058.1|1278885_1279038_+	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_001262621.1|1279083_1279371_+	hypothetical protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
WP_000340977.1|1279426_1279801_+	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_000750412.1|1280173_1280947_+	staphylococcal enterotoxin type A	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
WP_011447039.1|1281055_1281232_+|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_031762631.1|1281284_1281392_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000611512.1|1281443_1281698_+|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_000861038.1|1281709_1282465_+	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000920038.1|1282655_1283147_+	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_001793418.1|1283593_1283749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001791825.1|1283675_1283930_+	hypothetical protein	NA	Q4ZCK0	Staphylococcus_virus	93.0	8.0e-13
WP_001110820.1|1283836_1284133_+	peptidoglycan hydrolase	NA	A0A1P8L6B4	Staphylococcus_phage	95.9	1.6e-49
WP_000702263.1|1284643_1284994_+	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001791826.1|1285046_1285307_-	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_001789576.1|1285285_1285594_-	hypothetical protein	NA	M9NTD8	Staphylococcus_phage	100.0	3.2e-40
WP_000669791.1|1285617_1285797_-	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001807854.1|1286704_1287640_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_000561357.1|1287654_1287888_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_000448080.1|1288109_1288586_-	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	38.0	1.6e-22
WP_000068615.1|1288697_1289936_+	GTPase HflX	NA	NA	NA	NA	NA
WP_000652039.1|1289954_1291193_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000624945.1|1291436_1291805_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001126603.1|1291823_1293164_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001807853.1|1293682_1293880_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	50.0	9.9e-11
WP_074347689.1|1294566_1294794_+	hypothetical protein	NA	A0A1W6JNK0	Staphylococcus_phage	72.1	1.9e-18
WP_001002341.1|1295089_1295296_+	hypothetical protein	NA	A0A2H4PQT0	Staphylococcus_phage	55.2	5.5e-12
WP_001788716.1|1295996_1296107_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000006110.1|1296499_1296685_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	78.7	2.4e-19
WP_000477489.1|1297195_1297612_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000974166.1|1298043_1298628_-	ATP-binding protein	NA	A0A059NT77	Lactococcus_phage	42.6	4.4e-30
WP_000585092.1|1299276_1299528_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074347678.1|1299597_1300437_+|head	head morphogenesis protein	head	A0A1J0MFV1	Staphylococcus_phage	50.7	1.1e-29
>prophage 5
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	1572501	1580813	2763777	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
WP_001213908.1|1572501_1573287_-	metal ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
WP_000924214.1|1573412_1574303_-	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
WP_001062171.1|1574312_1575659_-	DEAD/DEAH box helicase	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
WP_000683941.1|1575772_1576873_-	Nif3-like dinuclear metal center hexameric protein	NA	A0A1S5V250	Saudi_moumouvirus	30.6	1.0e-08
WP_000624563.1|1576875_1577553_-|tRNA	tRNA (adenine-N(1))-methyltransferase	tRNA	NA	NA	NA	NA
WP_001283055.1|1577683_1578790_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
WP_001217255.1|1579013_1580813_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	3.5e-54
>prophage 6
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	1650234	1659277	2763777	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1650234_1650753_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595008.1|1650774_1653048_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	2.1e-64
WP_000749801.1|1653250_1655530_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_138766984.1|1655804_1656065_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	6.3e-05
WP_001112045.1|1656083_1657223_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019177.1|1657245_1658271_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005766.1|1658272_1659277_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 7
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	1782751	1830654	2763777	protease,transposase,tRNA	Staphylococcus_phage(91.89%)	48	NA	NA
WP_138766987.1|1782751_1789300_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	94.9	1.8e-294
WP_000836471.1|1789623_1789935_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	95.1	1.3e-49
WP_001807819.1|1789956_1792374_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.1	0.0e+00
WP_001025063.1|1792669_1793842_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	5.2e-216
WP_000526541.1|1793951_1794905_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	99.3	6.4e-79
WP_000764426.1|1794901_1795465_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	95.7	7.3e-99
WP_000757543.1|1795583_1795985_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1796556_1797384_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014937042.1|1797386_1797506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001834472.1|1797517_1797709_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196354.1|1797617_1798619_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
WP_001008555.1|1798746_1799205_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	97.4	4.1e-68
WP_001159034.1|1799217_1800399_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	1.9e-226
WP_000493892.1|1800409_1801042_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
WP_000384182.1|1801048_1802080_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	99.1	3.1e-196
WP_001261673.1|1802572_1804075_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	5.0e-30
WP_000221190.1|1804717_1805032_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	1.3e-52
WP_000989103.1|1805031_1806324_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	94.7	7.5e-216
WP_001032832.1|1806410_1807265_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1807540_1807765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671058.1|1807963_1808434_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	84.6	5.0e-69
WP_001153741.1|1808546_1808990_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030475.1|1808976_1809420_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	78.6	6.4e-50
WP_001168915.1|1809717_1810353_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000492903.1|1810519_1811140_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001096494.1|1811762_1812476_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091443.1|1812734_1813037_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200546.1|1813291_1813657_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	98.3	6.9e-58
WP_000623484.1|1813653_1814007_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	82.1	2.3e-18
WP_000453302.1|1814256_1815090_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	98.9	1.7e-157
WP_000366160.1|1815301_1816210_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	99.3	1.3e-137
WP_000933822.1|1816334_1817528_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
WP_000109913.1|1817899_1819492_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	99.6	0.0e+00
WP_138767045.1|1819788_1820535_-	prolyl oligopeptidase family serine peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	97.6	2.3e-140
WP_000672013.1|1820539_1821013_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1821078_1821336_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778553.1|1821332_1822334_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	86.5	3.3e-163
WP_000348381.1|1822338_1823817_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	95.5	6.7e-277
WP_016187363.1|1823975_1824431_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	96.6	8.3e-77
WP_001825423.1|1824733_1825396_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	87.7	2.8e-49
WP_000070644.1|1825476_1826472_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	94.8	1.3e-69
WP_000669036.1|1826546_1827173_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	84.1	9.9e-81
WP_000627549.1|1827213_1827558_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	96.5	5.1e-55
WP_000414230.1|1827655_1828228_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	3.5e-24
WP_000864133.1|1828425_1828983_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A2H4PQN8	Staphylococcus_phage	98.1	1.1e-78
WP_000375476.1|1829353_1829530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000070813.1|1829540_1829924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000196442.1|1830372_1830654_-|transposase	IS3 family transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	63.4	3.2e-23
>prophage 8
NZ_CP040229	Staphylococcus aureus strain GD487 chromosome, complete genome	2763777	1869045	1942559	2763777	tail,plate,holin,portal,head,tRNA,integrase,terminase,capsid	Staphylococcus_phage(76.47%)	89	1934074:1934092	1946718:1946736
WP_000181394.1|1869045_1869516_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_001793998.1|1869520_1870663_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_138766988.1|1870798_1871527_-	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	42.7	3.9e-36
WP_000649908.1|1871513_1872971_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000063551.1|1873227_1874289_-	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_000110011.1|1883234_1883681_-	peroxide-responsive transcriptional repressor PerR	NA	NA	NA	NA	NA
WP_000869465.1|1883777_1884728_-	2-hydroxyacid dehydrogenase	NA	NA	NA	NA	NA
WP_000939521.1|1884733_1885189_-	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
WP_001011603.1|1885269_1886559_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_001807907.1|1886851_1887946_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000597248.1|1888136_1889873_-	SAV1866 family putative multidrug efflux ABC transporter	NA	W8CYL7	Bacillus_phage	30.4	1.3e-53
WP_000251253.1|1890163_1890706_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
WP_000284749.1|1891008_1892046_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_000379101.1|1892197_1893175_+	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_014937047.1|1893278_1893509_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000886473.1|1893435_1894272_-	membrane protein	NA	NA	NA	NA	NA
WP_000535846.1|1894280_1895798_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
WP_000435806.1|1895812_1896127_-	YfhH family protein	NA	NA	NA	NA	NA
WP_001124416.1|1896104_1896923_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_000830380.1|1897183_1897993_-	monofunctional peptidoglycan glycosyltransferase SgtB	NA	NA	NA	NA	NA
WP_000163283.1|1898333_1898849_-	type 1 glutamine amidotransferase	NA	NA	NA	NA	NA
WP_001005407.1|1898978_1899140_-	hypothetical protein	NA	NA	NA	NA	NA
WP_100250272.1|1899486_1899567_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000382163.1|1899892_1900093_-	hypothetical protein	NA	W5R9N2	Staphylococcus_phage	100.0	3.7e-29
WP_000139423.1|1900079_1900190_-	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001788502.1|1900260_1900413_-	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_138766989.1|1900655_1902101_-	CHAP domain-containing protein	NA	A0A0H4ITZ3	Staphylococcus_phage	99.4	6.9e-295
WP_138766990.1|1902081_1902519_-|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	99.3	1.2e-72
WP_000398874.1|1902574_1902970_-	hypothetical protein	NA	A1KX48	Staphylococcus_virus	100.0	2.7e-68
WP_138766991.1|1902975_1904214_-|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	99.3	2.9e-209
WP_138766992.1|1904226_1906101_-	CHAP domain-containing protein	NA	Q4ZBX1	Staphylococcus_virus	99.8	0.0e+00
WP_000466769.1|1906237_1906537_-	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_001790193.1|1906577_1906751_-	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000705921.1|1906754_1907132_-	DUF2977 domain-containing protein	NA	Q4ZBX4	Staphylococcus_virus	100.0	1.6e-54
WP_029052110.1|1907131_1908955_-|plate	phage baseplate upper protein	plate	A0A0F6N3G2	Staphylococcus_phage	99.8	0.0e+00
WP_138766993.1|1908954_1910853_-	hypothetical protein	NA	Q4ZBX7	Staphylococcus_virus	99.7	0.0e+00
WP_001573307.1|1910865_1912752_-	hypothetical protein	NA	Q4ZBQ3	Staphylococcus_phage	99.8	0.0e+00
WP_138766994.1|1912762_1913704_-|tail	phage tail protein	tail	Q4ZBQ4	Staphylococcus_phage	99.7	1.5e-181
WP_138766995.1|1913718_1916862_-|terminase	terminase	terminase	Q4ZBY3	Staphylococcus_virus	99.9	0.0e+00
WP_000880587.1|1916865_1917150_-	hypothetical protein	NA	A0A0N7E0V9	Staphylococcus_phage	100.0	8.8e-45
WP_000134337.1|1917194_1917701_-	hypothetical protein	NA	Q4ZBQ7	Staphylococcus_phage	100.0	2.7e-92
WP_000057582.1|1917767_1918325_-|tail	tail protein	tail	Q4ZBQ8	Staphylococcus_phage	100.0	8.2e-103
WP_000270192.1|1918325_1918751_-	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	100.0	5.5e-75
WP_001151330.1|1918763_1919177_-	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	100.0	1.1e-75
WP_000483041.1|1919163_1919499_-|head	phage head closure protein	head	A0A0E3TAH8	Staphylococcus_phage	100.0	8.8e-60
WP_000177351.1|1919510_1919861_-|head,tail	phage head-tail adapter protein	head,tail	A0A0H3U2R5	Staphylococcus_phage	100.0	1.9e-60
WP_000235168.1|1920021_1920936_-|capsid	phage major capsid protein	capsid	A0A0H3U2U7	Staphylococcus_phage	100.0	1.2e-170
WP_001019221.1|1920952_1921537_-	DUF4355 domain-containing protein	NA	A0A2H4JDY6	uncultured_Caudovirales_phage	100.0	7.3e-78
WP_138766996.1|1921632_1922583_-|head	phage head morphogenesis protein	head	A0A0H3U2Z4	Staphylococcus_phage	99.4	1.4e-174
WP_138766997.1|1922551_1923976_-|portal	phage portal protein	portal	A0A0E3T9I6	Staphylococcus_phage	99.8	2.4e-271
WP_001037578.1|1923972_1925196_-|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_000594087.1|1925188_1925683_-	hypothetical protein	NA	A0A0N9BAX3	Staphylococcus_phage	99.4	2.2e-83
WP_025174416.1|1925851_1926106_+	hypothetical protein	NA	Q4ZB48	Staphylococcus_virus	78.6	1.1e-19
WP_000286968.1|1926035_1926437_-	hypothetical protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
WP_031902440.1|1926437_1926611_-	transcriptional regulator	NA	Q4ZA36	Staphylococcus_virus	94.7	5.4e-21
WP_001799187.1|1926607_1927003_-	hypothetical protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.3e-66
WP_000608278.1|1926986_1927223_-	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_001072794.1|1927215_1927419_-	hypothetical protein	NA	B2ZYX5	Staphylococcus_phage	98.5	8.8e-31
WP_000195769.1|1927415_1927622_-	DUF1381 domain-containing protein	NA	A0A1W6JPY0	Staphylococcus_phage	97.1	1.6e-19
WP_000120374.1|1927618_1927864_-	hypothetical protein	NA	A9CR89	Staphylococcus_phage	100.0	6.5e-28
WP_138766998.1|1927900_1928410_-	dUTP pyrophosphatase	NA	Q8SDV3	Staphylococcus_phage	98.2	6.2e-89
WP_000700108.1|1928402_1928645_-	hypothetical protein	NA	A0A2I6PF40	Staphylococcus_phage	100.0	3.7e-36
WP_001065101.1|1928634_1928871_-	DUF1024 family protein	NA	A0A0H3U313	Staphylococcus_phage	100.0	5.3e-35
WP_001557190.1|1928863_1929235_-	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.6e-54
WP_001562543.1|1929243_1929486_-	phage protein	NA	A0A0F6N3E1	Staphylococcus_phage	100.0	6.6e-41
WP_000029376.1|1929489_1929846_-	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_000101252.1|1929973_1930279_-	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_000049785.1|1930465_1930870_-	DUF1064 domain-containing protein	NA	A7TWN5	Staphylococcus_phage	99.3	1.6e-71
WP_001123688.1|1930880_1931102_-	DUF3269 family protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
WP_138766999.1|1931269_1932043_-	ATP-binding protein	NA	Q4ZAS1	Staphylococcus_virus	99.2	8.6e-143
WP_000504988.1|1932052_1932856_-	replication protein	NA	A0A2H4JCF5	uncultured_Caudovirales_phage	100.0	1.1e-121
WP_050959248.1|1932827_1933523_-	hypothetical protein	NA	A0A2I6PDA6	Staphylococcus_phage	100.0	3.7e-129
WP_001099009.1|1933534_1933978_-	single-stranded DNA-binding protein	NA	A0A2I6PD99	Staphylococcus_phage	100.0	1.8e-76
WP_000840496.1|1933974_1934625_-	single-stranded DNA-binding protein	NA	A0A0F6N3I5	Staphylococcus_phage	100.0	1.1e-119
1934074:1934092	attL	AATTTGTTCCTGGTATTTT	NA	NA	NA	NA
WP_001004336.1|1934625_1935162_-	hypothetical protein	NA	A0A0F6N4M6	Staphylococcus_phage	100.0	1.4e-80
WP_001108164.1|1935174_1935507_-	DUF1108 family protein	NA	A0A2I6PDT0	Staphylococcus_phage	100.0	2.9e-55
WP_000829610.1|1935439_1935757_-	hypothetical protein	NA	A0A2I6PEL3	Staphylococcus_phage	100.0	3.9e-33
WP_000048124.1|1935849_1936011_-	DUF1270 family protein	NA	C7F7L3	Staphylococcus_phage	100.0	1.9e-20
WP_000594789.1|1936003_1936225_-	hypothetical protein	NA	B2ZYU8	Staphylococcus_phage	100.0	8.7e-32
WP_000395455.1|1936295_1936526_+	hypothetical protein	NA	C8CGY3	Staphylococcus_phage	100.0	2.3e-35
WP_001148606.1|1936692_1937445_-	oxidoreductase	NA	A0A1X9H0A0	Staphylococcus_phage	99.2	1.5e-139
WP_000933364.1|1937446_1937632_-	helix-turn-helix transcriptional regulator	NA	A0A0H4IP57	Staphylococcus_phage	98.4	1.7e-25
WP_138767000.1|1938076_1938559_+	hypothetical protein	NA	A0A0N9BAX2	Staphylococcus_phage	99.4	2.4e-82
WP_000438350.1|1938659_1938839_-	hypothetical protein	NA	A0A0H3U490	Staphylococcus_phage	96.6	4.9e-25
WP_001106623.1|1938854_1939109_-	helix-turn-helix transcriptional regulator	NA	B7T095	Staphylococcus_virus	98.8	3.1e-41
WP_000874710.1|1939298_1939937_+	LexA family transcriptional regulator	NA	A0A0E3TAG1	Staphylococcus_phage	100.0	8.8e-117
WP_000705238.1|1940002_1940170_+	hypothetical protein	NA	Q4ZDJ4	Staphylococcus_virus	100.0	1.7e-24
WP_000337827.1|1941220_1941400_-	hypothetical protein	NA	Q4ZBP0	Staphylococcus_phage	100.0	3.7e-25
WP_001145722.1|1941512_1942559_+|integrase	site-specific integrase	integrase	Q4ZB10	Staphylococcus_virus	100.0	5.5e-201
1946718:1946736	attR	AATTTGTTCCTGGTATTTT	NA	NA	NA	NA
