assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005886545.1_ASM588654v1	NZ_CP035648	Enterococcus faecium strain UAMSEF_01 chromosome, complete genome	1	2349701-2349810	1	CRISPRCasFinder	no		cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	Orphan	CTTTGCTCAACCAGTATTATTCATCA	26	0	0	NA	NA	NA	1	1	Orphan	cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	NA,NA	NA|322aa|up_9|NZ_CP035648.1_2338059_2339025_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit	NA|360aa|up_8|NZ_CP035648.1_2339172_2340252_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|380aa|up_7|NZ_CP035648.1_2340501_2341641_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|238aa|up_6|NZ_CP035648.1_2341949_2342663_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|234aa|up_5|NZ_CP035648.1_2342916_2343618_-	cd01399, GlcN6P_deaminase, GlcN6P_deaminase: Glucosamine-6-phosphate (GlcN6P) deaminase subfamily; GlcN6P deaminase catalyzes the reversible conversion of GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium	NA|511aa|up_4|NZ_CP035648.1_2343851_2345384_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|283aa|up_3|NZ_CP035648.1_2345773_2346623_-	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|230aa|up_2|NZ_CP035648.1_2347908_2348598_-	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|123aa|up_1|NZ_CP035648.1_2348703_2349072_-	PRK00157, rplL, 50S ribosomal protein L7/L12; Reviewed	NA|168aa|up_0|NZ_CP035648.1_2349124_2349628_-	PRK00099, rplJ, 50S ribosomal protein L10; Reviewed	NA|230aa|down_0|NZ_CP035648.1_2350037_2350727_-	PRK05424, rplA, 50S ribosomal protein L1; Validated	NA|141aa|down_1|NZ_CP035648.1_2350830_2351253_-	PRK00140, rplK, 50S ribosomal protein L11; Validated	NA|223aa|down_2|NZ_CP035648.1_2351595_2352264_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|down_3|NZ_CP035648.1_2352276_2353149_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|340aa|down_4|NZ_CP035648.1_2353239_2354259_-	cd04737, LOX_like_FMN, L-Lactate oxidase (LOX) FMN-binding domain	NA|296aa|down_5|NZ_CP035648.1_2354431_2355319_-	pfam06028, DUF915, Alpha/beta hydrolase of unknown function (DUF915)	NA|182aa|down_6|NZ_CP035648.1_2355395_2355941_-	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|57aa|down_7|NZ_CP035648.1_2356041_2356212_-	pfam00584, SecE, SecE/Sec61-gamma subunits of protein translocation complex	NA|51aa|down_8|NZ_CP035648.1_2356235_2356388_-	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|215aa|down_9|NZ_CP035648.1_2356549_2357194_+	cd02205, CBS_pair_SF, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains superfamily
GCF_005886545.1_ASM588654v1	NZ_CP035649	Enterococcus faecium strain UAMSEF_01 plasmid unnamed1, complete sequence	1	430-557	1	CRISPRCasFinder	no		RT,DEDDh	Orphan	TCAGAGGGTATGAAAATCATACC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,cas14j,DEDDh,cas2,DinG,csa3,RT	NA,NA|111aa|down_0|NZ_CP035649.1_1864_2197_+,NA|80aa|down_3|NZ_CP035649.1_5053_5293_+,NA|70aa|down_4|NZ_CP035649.1_5359_5569_+,NA|275aa|down_8|NZ_CP035649.1_9093_9918_+,NA|83aa|down_9|NZ_CP035649.1_9927_10176_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|111aa|down_0|NZ_CP035649.1_1864_2197_+	NA	NA|114aa|down_1|NZ_CP035649.1_2815_3157_+	pfam17400, DUF5406, Family of unknown function (DUF5406)	NA|417aa|down_2|NZ_CP035649.1_3393_4644_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|80aa|down_3|NZ_CP035649.1_5053_5293_+	NA	NA|70aa|down_4|NZ_CP035649.1_5359_5569_+	NA	NA|224aa|down_5|NZ_CP035649.1_5628_6300_+	cd06165, Sortase_A, Sortase domain found in class A sortases	NA|659aa|down_6|NZ_CP035649.1_6352_8329_+	pfam16569, GramPos_pilinBB, Gram-positive pilin backbone subunit 2, Cna-B-like domain	NA|252aa|down_7|NZ_CP035649.1_8341_9097_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|275aa|down_8|NZ_CP035649.1_9093_9918_+	NA	NA|83aa|down_9|NZ_CP035649.1_9927_10176_+	NA
