The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	1040781	1047896	5305706	transposase	Salmonella_phage(33.33%)	6	NA	NA
WP_000603518.1|1040781_1041543_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.7	7.7e-19
WP_012579081.1|1042008_1042932_-|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	2.2e-177
WP_012579082.1|1043011_1043887_-	class A extended-spectrum beta-lactamase CTX-M-24	NA	A0A1B0VBP7	Salmonella_phage	99.3	2.3e-152
WP_000608644.1|1044136_1045399_-|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
WP_000256426.1|1045836_1047255_+	sugar porter family MFS transporter	NA	O13311	Aichi_virus	26.9	1.8e-24
WP_000502112.1|1047437_1047896_+|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	32.3	1.0e-13
>prophage 2
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	1134016	1188062	5305706	tRNA,transposase	Escherichia_phage(47.37%)	56	NA	NA
WP_106106683.1|1134016_1135365_-|transposase	IS3 family transposase	transposase	A0A1B1P773	Bacillus_phage	51.7	4.3e-73
WP_001130266.1|1135499_1136075_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA	NA
WP_000109536.1|1136091_1136352_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_094158903.1|1136342_1137614_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000987944.1|1137691_1138057_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_001551556.1|1138372_1140172_+	NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA	NA	NA	NA	NA
WP_001290706.1|1140171_1141884_+	assimilatory sulfite reductase (NADPH) hemoprotein subunit	NA	NA	NA	NA	NA
WP_001521160.1|1141957_1142692_+	phosphoadenosine phosphosulfate reductase	NA	NA	NA	NA	NA
WP_000956458.1|1142956_1143109_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA	NA
WP_001551555.1|1143303_1146003_+	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
WP_001551554.1|1146100_1147663_+	type I-E CRISPR-associated protein Cse1/CasA	NA	NA	NA	NA	NA
WP_000029331.1|1147659_1148196_+	type I-E CRISPR-associated protein Cse2/CasB	NA	NA	NA	NA	NA
WP_000206445.1|1148210_1149266_+	type I-E CRISPR-associated protein Cas7/Cse4/CasC	NA	NA	NA	NA	NA
WP_001551553.1|1149276_1150023_+	type I-E CRISPR-associated protein Cas5/CasD	NA	NA	NA	NA	NA
WP_000281438.1|1150004_1150655_+	type I-E CRISPR-associated protein Cas6/Cse3/CasE	NA	NA	NA	NA	NA
WP_060579132.1|1150651_1151539_+	type I-E CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_001067858.1|1151572_1152277_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_000027057.1|1152748_1153609_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_138585042.1|1153885_1154290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001067858.1|1154266_1154971_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_000301062.1|1155308_1155737_+	transporter	NA	NA	NA	NA	NA
WP_001551545.1|1155775_1156120_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA	NA
WP_001272891.1|1156406_1158968_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.7	2.7e-31
WP_001141345.1|1159073_1159730_+	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	47.0	5.0e-51
WP_001295181.1|1159780_1160548_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	2.5e-70
WP_000847985.1|1160743_1161652_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.9	3.0e-118
WP_001551546.1|1161648_1162911_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.2	3.7e-135
WP_001278994.1|1162907_1163546_+	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_001136925.1|1163550_1164327_+	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_000104457.1|1164415_1165780_+	GntP family transporter	NA	NA	NA	NA	NA
WP_000562982.1|1165818_1166055_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001551547.1|1166065_1167493_-	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_001237173.1|1167492_1168086_-	UbiX family flavin prenyltransferase	NA	NA	NA	NA	NA
WP_001208066.1|1168232_1168640_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000081550.1|1168760_1169753_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_001272592.1|1169815_1170955_-	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000254708.1|1171094_1171721_-	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001295182.1|1171714_1172476_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
WP_000568924.1|1172456_1173506_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_001219242.1|1173502_1173982_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_000246131.1|1173981_1174692_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000517476.1|1174710_1175022_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_001551549.1|1175215_1175539_-	DUF3561 family protein	NA	NA	NA	NA	NA
WP_001173673.1|1175588_1176194_-	adenylyl-sulfate kinase	NA	A0A2K9L4R9	Tupanvirus	38.1	4.2e-28
WP_001551550.1|1176193_1177621_-	sulfate adenylyltransferase subunit CysN	NA	A0A1V0SGC3	Hokovirus	31.4	9.7e-31
WP_000372108.1|1177622_1178531_-	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
WP_001551551.1|1178782_1179820_+	alkaline phosphatase isozyme conversion aminopeptidase	NA	NA	NA	NA	NA
WP_000063172.1|1180514_1180808_-	type I-E CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA	NA
WP_001067858.1|1180930_1181635_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_012477590.1|1181668_1182589_-|transposase	IS4 family transposase	transposase	A4KWT9	Enterobacteria_phage	100.0	2.7e-175
WP_000557454.1|1183803_1184664_+	aminoglycoside N-acetyltransferase AAC(3)-IId	NA	NA	NA	NA	NA
WP_000587837.1|1184676_1185219_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_000951934.1|1185700_1185892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001330846.1|1185897_1186143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060579135.1|1186193_1187321_+	DUF3883 domain-containing protein	NA	NA	NA	NA	NA
WP_001067855.1|1187357_1188062_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 3
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	1339760	1381526	5305706	holin,tail,integrase,head,terminase	Salmonella_phage(53.33%)	55	1339498:1339515	1381734:1381751
1339498:1339515	attL	TTCACACATATCACAATT	NA	NA	NA	NA
WP_001138334.1|1339760_1341158_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_001291429.1|1341154_1341355_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_001551511.1|1341351_1342746_-	DEAD/DEAH box helicase	NA	Q3LZN8	Bacteriophage	73.5	1.0e-210
WP_001551510.1|1342808_1343726_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001551509.1|1343741_1344026_-	VRR-NUC domain-containing protein	NA	B6SD64	Bacteriophage	68.2	8.3e-27
WP_001551508.1|1344025_1344220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001551506.1|1344455_1345217_-	nucleotide-binding protein	NA	NA	NA	NA	NA
WP_001551504.1|1345281_1347345_-	hypothetical protein	NA	Q775A3	Bordetella_phage	67.7	6.7e-275
WP_000551014.1|1347391_1348021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000769005.1|1348073_1348622_-	DUF2815 family protein	NA	Q775A5	Bordetella_phage	65.9	2.1e-66
WP_001551502.1|1348637_1349939_-	DUF2800 domain-containing protein	NA	B6SCX9	Bacteriophage	55.5	5.2e-132
WP_001551501.1|1349941_1350844_-	hypothetical protein	NA	Q3LZP9	Bacteriophage	54.4	6.1e-07
WP_001551500.1|1351214_1351784_+	hypothetical protein	NA	K7P861	Enterobacteria_phage	52.7	3.2e-38
WP_001551499.1|1352159_1352834_-	helix-turn-helix transcriptional regulator	NA	B6SCU0	Bacteriophage	51.1	1.8e-59
WP_000016208.1|1352975_1353176_+	transcriptional regulator	NA	K7RWG7	Bacteriophage	50.0	1.0e-07
WP_001551498.1|1353179_1355441_+	bifunctional DNA primase/polymerase	NA	NA	NA	NA	NA
WP_000034494.1|1355756_1356047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551497.1|1356072_1356495_+	hypothetical protein	NA	Q8W638	Enterobacteria_phage	65.0	8.0e-42
WP_000781776.1|1357027_1357369_+|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	91.9	2.8e-53
WP_001194119.1|1357372_1357849_+	glycoside hydrolase family protein	NA	Q8SBE0	Shigella_phage	96.2	2.1e-86
WP_001551496.1|1357832_1358357_+	hypothetical protein	NA	K7P6W1	Enterobacteria_phage	67.7	2.6e-42
WP_000162796.1|1358418_1358991_+|terminase	terminase small subunit	terminase	A0A2H4J480	uncultured_Caudovirales_phage	69.6	1.4e-60
WP_001551495.1|1358993_1360616_+	hypothetical protein	NA	A0A0M5M1R6	Salmonella_phage	95.6	0.0e+00
WP_001551494.1|1360615_1362082_+	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	92.0	6.0e-262
WP_136759112.1|1361972_1362707_+|head	phage head morphogenesis protein	head	A0A0M4REK0	Salmonella_phage	85.1	5.2e-97
WP_001551492.1|1362721_1363942_+	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	88.0	9.3e-200
WP_001066732.1|1363945_1364452_+	hypothetical protein	NA	A0A0M4QWZ6	Salmonella_phage	79.9	3.7e-70
WP_001551491.1|1364463_1365405_+	DUF2184 domain-containing protein	NA	A0A0M3ULD3	Salmonella_phage	86.6	1.6e-154
WP_001107515.1|1365446_1365668_+	hypothetical protein	NA	A0A0M4RTX5	Salmonella_phage	68.6	7.7e-12
WP_001551489.1|1365633_1366041_+	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	94.8	1.5e-69
WP_001551487.1|1366037_1366592_+	hypothetical protein	NA	A0A0M4S631	Salmonella_phage	83.7	7.4e-80
WP_001551486.1|1366578_1366968_+	hypothetical protein	NA	A0A0M3ULK0	Salmonella_phage	95.3	3.3e-66
WP_001349562.1|1366942_1367506_+	hypothetical protein	NA	A0A0M4R331	Salmonella_phage	76.3	3.4e-80
WP_001551485.1|1367509_1368655_+	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	73.5	5.2e-160
WP_000109249.1|1368665_1369106_+	DUF3277 family protein	NA	A0A2H4J619	uncultured_Caudovirales_phage	75.3	7.0e-57
WP_000393954.1|1369109_1369562_+	hypothetical protein	NA	A0A0M4S6U8	Salmonella_phage	72.7	4.7e-56
WP_023141050.1|1369573_1369750_+	hypothetical protein	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	70.0	1.6e-12
WP_001551484.1|1369739_1371725_+	hypothetical protein	NA	A0A0M4REK7	Salmonella_phage	53.3	3.8e-174
WP_001298404.1|1371724_1372312_+	hypothetical protein	NA	A0A0M3ULD5	Salmonella_phage	88.0	3.4e-83
WP_000155119.1|1372311_1372614_+	hypothetical protein	NA	A0A0M4R5B7	Salmonella_phage	92.0	2.2e-49
WP_072201605.1|1372616_1373255_+	hypothetical protein	NA	A0A0M4QX01	Salmonella_phage	87.3	1.3e-96
WP_072201604.1|1373261_1373681_+	hypothetical protein	NA	A0A0M4QX01	Salmonella_phage	72.9	4.6e-50
WP_001551482.1|1373680_1374016_+	hypothetical protein	NA	A0A0M4RTY3	Salmonella_phage	71.2	1.7e-23
WP_001551481.1|1374012_1374525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551480.1|1374585_1375338_+	hypothetical protein	NA	A0A0M5M1K7	Salmonella_phage	65.5	8.5e-87
WP_001270631.1|1375337_1375691_+	hypothetical protein	NA	A0A0M4R339	Salmonella_phage	88.9	1.5e-54
WP_001551479.1|1375690_1376890_+	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	83.6	4.9e-185
WP_000049943.1|1376886_1377567_+	DUF2612 domain-containing protein	NA	A0A0M5M1K4	Salmonella_phage	78.8	1.5e-103
WP_001551478.1|1377566_1378361_+	hypothetical protein	NA	K7PH60	Enterobacterial_phage	91.0	6.9e-79
WP_024192484.1|1378360_1378954_+|tail	phage tail protein	tail	Q9MCR5	Enterobacteria_phage	64.9	7.0e-60
WP_001174919.1|1378925_1379366_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	66.7	1.5e-51
WP_077634188.1|1379368_1379767_-|tail	phage tail protein	tail	A0A0F7LBW5	Escherichia_phage	37.3	8.1e-12
WP_000904955.1|1379793_1380108_+	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	89.9	1.6e-39
WP_001039127.1|1380112_1380958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001253100.1|1381259_1381526_-	hypothetical protein	NA	A0A0M3ULK3	Salmonella_phage	83.0	2.7e-35
1381734:1381751	attR	TTCACACATATCACAATT	NA	NA	NA	NA
>prophage 4
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	1595207	1634176	5305706	holin,portal,head,terminase,protease,lysis	Enterobacteria_phage(50.0%)	59	NA	NA
WP_001551412.1|1595207_1596641_-	glycoside hydrolase family 32 protein	NA	F8WPR5	Bacillus_phage	25.0	5.3e-29
WP_001551411.1|1596856_1597780_+	aminoimidazole riboside kinase	NA	NA	NA	NA	NA
WP_001197021.1|1597841_1599089_+	MFS transporter	NA	NA	NA	NA	NA
WP_001316510.1|1599168_1599321_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001163428.1|1599618_1599819_-	response regulator inhibitor TorI	NA	K7P7V0	Enterobacteria_phage	100.0	2.4e-33
WP_000545716.1|1599876_1600044_-	hypothetical protein	NA	K7P728	Enterobacteria_phage	92.7	9.2e-26
WP_029701309.1|1600115_1600400_-	RNA-binding protein	NA	A0A2D1GLL3	Escherichia_phage	94.7	9.4e-47
WP_029701304.1|1600392_1601184_-	DUF551 domain-containing protein	NA	A0A0H4IU61	Shigella_phage	51.8	1.0e-58
WP_000951706.1|1601180_1601390_-	hypothetical protein	NA	A0A077SL56	Escherichia_phage	100.0	4.2e-36
WP_029701302.1|1601391_1602084_-	ead/Ea22-like family protein	NA	A0A088CC42	Shigella_phage	55.4	1.2e-82
WP_029701301.1|1602070_1602325_-	hypothetical protein	NA	A0A1V0E5L1	Salmonella_phage	95.2	3.2e-38
WP_032153684.1|1602321_1602489_-	DUF2737 family protein	NA	Q716F2	Shigella_phage	98.2	5.0e-24
WP_029701300.1|1602485_1602767_-	hypothetical protein	NA	K7P7M4	Enterobacteria_phage	96.8	2.8e-43
WP_000753555.1|1602783_1603098_-	hypothetical protein	NA	K7PLT4	Enterobacteria_phage	100.0	1.2e-50
WP_032153683.1|1603109_1603592_-	siphovirus Gp157 family protein	NA	K7P6T5	Enterobacteria_phage	97.5	6.1e-78
WP_060579119.1|1603575_1604487_-	DNA recombinase	NA	K7PKG9	Enterobacteria_phage	98.3	4.1e-168
WP_000604111.1|1604483_1604792_-	hypothetical protein	NA	K7PJM4	Enterobacteria_phage	100.0	1.1e-53
WP_001243355.1|1604876_1605029_-	host cell division inhibitory peptide Kil	NA	A5VWA5	Enterobacteria_phage	100.0	4.7e-21
WP_000638547.1|1605013_1605145_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	A5VWA4	Enterobacteria_phage	100.0	1.4e-16
WP_060579118.1|1605169_1606138_-	hypothetical protein	NA	K7P7J7	Enterobacteria_phage	99.4	7.7e-56
WP_000167595.1|1606281_1606752_-	hypothetical protein	NA	A0A1I9LJN4	Stx_converting_phage	100.0	3.7e-88
WP_072201588.1|1606760_1607138_-	antitermination protein	NA	A4KWR0	Enterobacteria_phage	99.1	3.1e-53
WP_001519589.1|1607483_1608179_-	LexA family transcriptional regulator	NA	A0A0N7BTS4	Escherichia_phage	96.5	1.3e-129
WP_000067728.1|1608254_1608470_+	helix-turn-helix transcriptional regulator	NA	A0A0N7C2U7	Escherichia_phage	98.6	8.2e-35
WP_000251073.1|1608589_1608883_+	hypothetical protein	NA	K7P6Y2	Enterobacteria_phage	100.0	2.8e-46
WP_060579117.1|1609063_1609954_+	hypothetical protein	NA	K7PH45	Enterobacterial_phage	98.6	1.9e-157
WP_029701292.1|1609943_1611380_+	AAA family ATPase	NA	A0A220NRL4	Escherichia_phage	99.2	3.3e-273
WP_029701290.1|1611455_1611662_+	hypothetical protein	NA	K7P7Y0	Enterobacteria_phage	95.6	1.5e-30
WP_029701287.1|1611770_1612109_+	hypothetical protein	NA	A0A2I6PIG0	Escherichia_phage	67.0	2.3e-31
WP_029701286.1|1612111_1612522_+	recombination protein NinB	NA	K7PJW4	Enterobacteria_phage	99.3	7.2e-72
WP_001254255.1|1612518_1612695_+	NinE family protein	NA	A5VW90	Enterobacteria_phage	100.0	4.6e-28
WP_025748956.1|1612697_1613051_+	DUF2591 domain-containing protein	NA	K7PH48	Enterobacterial_phage	73.0	4.5e-38
WP_000950943.1|1613050_1613227_+	protein ninF	NA	A0A220NRM2	Escherichia_phage	98.3	2.5e-26
WP_001286917.1|1613219_1613432_+	hypothetical protein	NA	K7PK10	Enterobacteria_phage	100.0	1.6e-35
WP_025748957.1|1613424_1613715_+	DUF1364 domain-containing protein	NA	A0A192Y6R9	Salmonella_phage	97.9	1.9e-50
WP_000006226.1|1613711_1614074_+	RusA family crossover junction endodeoxyribonuclease	NA	K7P6I9	Enterobacteria_phage	99.2	3.5e-62
WP_000994516.1|1614070_1614259_+	protein ninH	NA	A5VW84	Enterobacteria_phage	100.0	5.5e-27
WP_021530015.1|1614255_1614774_+	DUF1133 family protein	NA	A5VW83	Enterobacteria_phage	98.3	6.5e-94
WP_000783734.1|1615283_1615607_+|holin	phage holin, lambda family	holin	G5DA93	Enterobacteria_phage	100.0	1.3e-52
WP_000229390.1|1615590_1616067_+	glycoside hydrolase family protein	NA	G5DA94	Enterobacteria_phage	100.0	9.8e-89
WP_029701281.1|1616063_1616531_+|lysis	lysis protein	lysis	A0A291AWW3	Escherichia_phage	95.5	6.7e-74
WP_001139680.1|1616518_1616671_+	hypothetical protein	NA	K7PKL2	Enterobacteria_phage	100.0	1.2e-21
WP_029701280.1|1616910_1617249_+	hypothetical protein	NA	A0A1W6DXZ5	Salmonella_phage	88.3	2.1e-48
WP_000807788.1|1617352_1617595_+	DUF2560 family protein	NA	A5VW77	Enterobacteria_phage	100.0	1.3e-36
WP_021566250.1|1617597_1618038_+	hypothetical protein	NA	C7U0W1	Enterobacteria_phage	100.0	3.5e-80
WP_060579116.1|1618034_1619447_+|terminase	PBSX family phage terminase large subunit	terminase	Q716H3	Shigella_phage	99.8	5.8e-278
WP_000852333.1|1619449_1621576_+|portal	portal protein p19	portal	Q9AYZ9	Salmonella_phage	99.6	0.0e+00
WP_000426735.1|1621589_1622474_+	hypothetical protein	NA	Q716H1	Shigella_phage	99.7	8.1e-145
WP_060579115.1|1622485_1623757_+|head	head protein	head	Q9AYZ7	Salmonella_phage	99.5	7.3e-240
WP_060579114.1|1623799_1623985_+	hypothetical protein	NA	Q716G9	Shigella_phage	98.4	7.8e-26
WP_000246750.1|1623959_1624442_+	packaged DNA stabilization protein p27	NA	Q716G8	Shigella_phage	100.0	3.8e-88
WP_060579113.1|1624450_1625869_+	hypothetical protein	NA	Q716G7	Shigella_phage	98.7	6.6e-274
WP_021529423.1|1625871_1626366_+	hypothetical protein	NA	A0A1U9HWQ1	Salmonella_phage	46.0	5.1e-32
WP_029701273.1|1626365_1627067_+	hypothetical protein	NA	A5VW68	Enterobacteria_phage	98.3	3.9e-118
WP_029701271.1|1627066_1627522_+	DUF2824 family protein	NA	A5VW67	Enterobacteria_phage	99.3	5.2e-87
WP_029701269.1|1627524_1628217_+	hypothetical protein	NA	G5DA80	Enterobacteria_phage	99.1	3.5e-111
WP_029701268.1|1628226_1629615_+	DNA transfer protein	NA	A0A220NR03	Salmonella_phage	65.1	8.2e-152
WP_029701266.1|1629614_1631612_+	hypothetical protein	NA	Q716G2	Shigella_phage	98.3	0.0e+00
WP_029701265.1|1631776_1634176_+|head	phage head protein	head	A5VW57	Enterobacteria_phage	90.6	3.0e-77
>prophage 5
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	1883878	1893321	5305706		Enterobacteria_phage(85.71%)	10	NA	NA
WP_000569343.1|1883878_1884805_+	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
WP_000783134.1|1884809_1885541_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216963.1|1885521_1885629_-	protein YohO	NA	NA	NA	NA	NA
WP_001240398.1|1885688_1886420_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.0	2.8e-111
WP_001295431.1|1886641_1888327_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_001308766.1|1888323_1889043_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001551352.1|1889089_1889560_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	99.4	5.2e-82
WP_001295429.1|1889601_1890063_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
WP_001551351.1|1890187_1892188_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
WP_001551350.1|1892184_1893321_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	5.0e-163
>prophage 6
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	1987156	1994891	5305706		Enterobacteria_phage(33.33%)	8	NA	NA
WP_001116045.1|1987156_1988551_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	31.9	2.4e-18
WP_000183029.1|1988725_1989619_+	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.4	1.3e-46
WP_000699453.1|1989991_1991077_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.6	2.6e-100
WP_001023648.1|1991076_1991976_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.6	8.2e-28
WP_000857507.1|1992034_1992910_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	8.6e-107
WP_032139969.1|1992927_1993338_+	WxcM-like domain-containing protein	NA	NA	NA	NA	NA
WP_001332228.1|1993324_1993792_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_001033086.1|1993784_1994891_+	DegT/DnrJ/EryC1/StrS family aminotransferase	NA	E5ES42	Bathycoccus_sp._RCC1105_virus	32.6	5.9e-44
>prophage 7
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	2344116	2387784	5305706	portal,tail,capsid,integrase,head,terminase,lysis	Enterobacteria_phage(58.49%)	59	2341512:2341525	2361326:2361339
2341512:2341525	attL	ATAAAATTATGTAT	NA	NA	NA	NA
WP_001196928.1|2344116_2345325_+|integrase	site-specific integrase	integrase	I6R9B6	Salmonella_phage	74.9	4.7e-180
WP_001354056.1|2345282_2345513_-	hypothetical protein	NA	A0A1P8DTG1	Proteus_phage	55.7	2.9e-14
WP_000488401.1|2345603_2345882_-	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	96.7	1.4e-47
WP_000763364.1|2345929_2346148_-	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	95.8	1.8e-34
WP_001386642.1|2346246_2346528_-	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
WP_000548531.1|2346538_2346730_-	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	100.0	7.3e-27
WP_000682318.1|2346702_2346885_-	DUF1317 domain-containing protein	NA	A0A0N7CHV0	Escherichia_phage	98.3	1.3e-28
WP_000186804.1|2346881_2347562_-	YqaJ viral recombinase family protein	NA	A0A0N6WET1	Escherichia_phage	98.7	1.3e-131
WP_000100847.1|2347558_2348344_-	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
WP_000995443.1|2348349_2348646_-	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	99.0	4.7e-49
WP_023148105.1|2348721_2349012_-	hypothetical protein	NA	K7P6H3	Enterobacteria_phage	85.1	5.0e-27
WP_000858975.1|2349523_2350213_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	75.0	2.8e-92
WP_001067458.1|2350317_2350548_+	helix-turn-helix domain-containing protein	NA	A0A2H4FNF3	Salmonella_phage	68.0	1.5e-21
WP_001182891.1|2350617_2351157_+	hypothetical protein	NA	K7PJT7	Enterobacteria_phage	67.6	6.8e-62
WP_001551200.1|2351243_2352173_+	replication protein	NA	A0A0M5M7Y1	Salmonella_phage	64.1	8.0e-111
WP_000788813.1|2352169_2352871_+	hypothetical protein	NA	M1FJ72	Enterobacteria_phage	99.1	3.8e-129
WP_000145915.1|2352867_2353170_+	protein ren	NA	A0A0N6WES4	Escherichia_phage	95.7	1.1e-42
WP_001070450.1|2353237_2353570_+	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA	NA
WP_001299444.1|2353617_2353767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551199.1|2353824_2355351_+	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	31.1	1.2e-31
WP_001445652.1|2355815_2356367_+	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA	NA
WP_000881075.1|2356376_2357174_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001303586.1|2357290_2357392_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001054342.1|2357388_2357844_+	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	66.9	5.4e-60
WP_000224916.1|2357843_2358014_+	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	67.9	1.5e-12
WP_000774479.1|2358006_2358297_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
WP_001099655.1|2358293_2358656_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	97.4	7.3e-60
WP_000971071.1|2358652_2358793_+	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	2.5e-08
WP_001204777.1|2358878_2359256_+	antitermination protein	NA	Q777W5	Enterobacteria_phage	84.2	7.3e-55
WP_000780581.1|2359411_2359936_-	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	54.1	1.1e-48
WP_001563769.1|2360128_2361088_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA	NA
WP_000839582.1|2362358_2362574_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	98.6	1.2e-33
2361326:2361339	attR	ATACATAATTTTAT	NA	NA	NA	NA
WP_001135296.1|2362573_2363071_+	lysozyme	NA	M1FJA0	Enterobacteria_phage	97.0	1.6e-89
WP_001228695.1|2363287_2363470_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.3	2.9e-17
WP_000738421.1|2363560_2363854_-	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	90.7	5.9e-44
WP_000453587.1|2364522_2365068_+	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.9	1.4e-94
WP_001027295.1|2365042_2366968_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.7	0.0e+00
WP_000198149.1|2366964_2367171_+|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_001563772.1|2367167_2368769_+|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	99.1	4.2e-309
WP_001563773.1|2368749_2370069_+	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	98.9	4.8e-234
WP_001563774.1|2370078_2370411_+|head	head decoration protein	head	C6ZCY1	Enterobacteria_phage	99.1	2.5e-54
WP_000063277.1|2370466_2371492_+|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	99.7	2.7e-192
WP_000158862.1|2371533_2371932_+	DNA-packaging protein FI	NA	A0A0K2FIR1	Enterobacteria_phage	83.3	1.2e-50
WP_000752974.1|2371943_2372297_+|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	97.4	2.9e-61
WP_000975083.1|2372308_2372887_+|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	99.0	1.7e-79
WP_000683138.1|2372883_2373279_+|tail	tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	99.2	5.0e-70
WP_001563775.1|2373286_2374027_+|tail	phage tail protein	tail	A0A2I6TC77	Escherichia_phage	98.8	2.5e-131
WP_001563776.1|2374042_2374456_+|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	93.6	5.4e-67
WP_000459472.1|2374437_2374872_+|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	98.3	3.8e-63
WP_001563777.1|2374864_2377444_+|tail	phage tail tape measure protein	tail	A0A2R9YJM8	Escherichia_phage	88.1	0.0e+00
WP_001563778.1|2377440_2377770_+|tail	phage tail protein	tail	A0A0K2FIE9	Enterobacteria_phage	98.2	1.4e-57
WP_001563779.1|2377769_2378468_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	98.3	4.7e-132
WP_000194780.1|2378472_2379216_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.8	2.5e-147
WP_071591506.1|2379152_2379785_+|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	99.0	8.5e-96
WP_001563780.1|2379845_2383325_+	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	89.9	0.0e+00
WP_001563781.1|2383392_2383992_+	Ail/Lom family outer membrane beta-barrel protein	NA	Q9EV15	Enterobacteria_phage	88.4	8.6e-98
WP_021561299.1|2384056_2386456_+|tail	phage tail fiber protein	tail	A0A0E3M194	Enterobacteria_phage	57.7	2.9e-136
WP_001550853.1|2386452_2386734_+	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	48.9	1.2e-17
WP_001550854.1|2386743_2387784_+|tail	tail fiber domain-containing protein	tail	A0A0E3M4A9	Enterobacteria_phage	67.9	1.7e-125
>prophage 8
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	2514479	2527604	5305706	capsid,integrase,head,terminase,protease	uncultured_Caudovirales_phage(28.57%)	19	2501235:2501249	2525039:2525053
2501235:2501249	attL	GCTAAAACCGCCATC	NA	NA	NA	NA
WP_023063565.1|2514479_2515718_+|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	52.7	4.0e-126
WP_001302637.1|2516135_2516345_+	AlpA family phage regulatory protein	NA	A0A2H4JB58	uncultured_Caudovirales_phage	66.1	1.8e-15
WP_032300391.1|2516355_2517171_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075827259.1|2517103_2517394_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
WP_001113142.1|2517386_2517707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023063568.1|2517713_2518013_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_023063569.1|2518009_2519827_+	DNA primase phage-associated	NA	Q7M2A8	Enterobacteria_phage	47.9	1.1e-127
WP_024210327.1|2520114_2520360_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000126638.1|2520356_2520779_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
WP_126856877.1|2520744_2520942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001281836.1|2521052_2522093_+|capsid	phage capsid protein	capsid	C6ZCY2	Enterobacteria_phage	42.7	6.7e-66
WP_000190775.1|2522102_2522444_+|head	head decoration protein	head	NA	NA	NA	NA
WP_000572593.1|2522453_2522798_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_001390169.1|2522865_2523000_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023063570.1|2522999_2523542_+|terminase	terminase small subunit	terminase	O64316	Escherichia_phage	48.1	2.9e-36
WP_000133431.1|2523615_2523897_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001334712.1|2524021_2524216_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000520781.1|2524976_2525297_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
2525039:2525053	attR	GCTAAAACCGCCATC	NA	NA	NA	NA
WP_000934041.1|2525327_2527604_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	1.9e-166
>prophage 9
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	2773040	2825185	5305706	holin,portal,tail,capsid,integrase,head,terminase,lysis	Escherichia_phage(36.84%)	72	2766495:2766509	2793636:2793650
2766495:2766509	attL	AACTGGCGAAACGTA	NA	NA	NA	NA
WP_000074983.1|2773040_2774159_-|integrase	tyrosine-type recombinase/integrase	integrase	Q77Z04	Phage_21	44.2	7.7e-84
WP_000003742.1|2774127_2774397_-	excisionase	NA	NA	NA	NA	NA
WP_000102155.1|2774458_2776915_-	exonuclease	NA	V5UQJ3	Shigella_phage	42.6	3.3e-103
WP_001093951.1|2776992_2777196_-	DUF1482 family protein	NA	NA	NA	NA	NA
WP_000450218.1|2777192_2777381_-	cell division inhibitor	NA	NA	NA	NA	NA
WP_000935596.1|2777391_2778246_-	hypothetical protein	NA	A0A0P0ZE80	Stx2-converting_phage	63.2	3.6e-65
WP_000394557.1|2778776_2779151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000379564.1|2779162_2779315_-	DUF1391 domain-containing protein	NA	NA	NA	NA	NA
WP_000787428.1|2779521_2779929_-	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	49.6	9.8e-29
WP_000912294.1|2780005_2780233_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000705383.1|2780216_2780768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000020541.1|2780739_2781780_+	DNA-binding protein	NA	A0A0U2RT81	Escherichia_phage	87.2	1.0e-90
WP_001403041.1|2781811_2782234_+	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	89.3	2.8e-71
WP_000450706.1|2782267_2783038_+	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	68.4	1.1e-86
WP_001141099.1|2783053_2783446_+	DUF977 family protein	NA	A0A088CBK9	Shigella_phage	63.3	1.5e-39
WP_001266130.1|2783442_2783739_+	DUF4406 domain-containing protein	NA	A0A0U2SAZ1	Escherichia_phage	95.8	1.2e-47
WP_001209475.1|2783735_2784197_+	ead/Ea22-like family protein	NA	Q8VNQ2	Enterobacteria_phage	94.0	2.6e-38
WP_000403791.1|2784174_2784531_+	hypothetical protein	NA	A0A2R2Z307	Escherichia_phage	98.3	1.1e-57
WP_000137947.1|2784626_2785034_+	hypothetical protein	NA	A0A0N7KZJ2	Stx2-converting_phage	60.4	6.1e-23
WP_001229301.1|2785035_2785401_+	HNH endonuclease	NA	A0A2R2Z2X9	Escherichia_phage	99.2	1.9e-68
WP_000208092.1|2785397_2786384_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	41.5	1.8e-44
WP_000786207.1|2786504_2786684_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000813254.1|2786942_2787098_+	type I toxin-antitoxin system toxin HokD	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
WP_001309416.1|2787314_2787566_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001309417.1|2787632_2787911_+	hypothetical protein	NA	I6PCV7	Cronobacter_phage	45.3	6.3e-11
WP_001265256.1|2787912_2788971_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	48.3	1.8e-90
WP_000140038.1|2788971_2789340_+	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	62.8	2.4e-34
WP_001064909.1|2789332_2790022_+	antiterminator	NA	I6PDF8	Cronobacter_phage	48.1	7.1e-56
WP_001309418.1|2790234_2790432_+	hypothetical protein	NA	S5MQK8	Escherichia_phage	93.8	1.7e-26
WP_000871291.1|2790801_2791137_-	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	74.8	5.2e-44
WP_001309419.1|2791382_2791586_+	DUF1737 domain-containing protein	NA	H6WZJ9	Escherichia_phage	96.8	2.7e-27
WP_000284506.1|2791893_2792109_+|holin	holin	holin	Q9ZWW2	Enterobacteria_phage	100.0	6.9e-34
WP_001037013.1|2792113_2793004_+	YdfR family protein	NA	Q08JA0	Stx2-converting_phage	70.9	1.2e-108
WP_001092866.1|2793040_2793574_+	lysozyme	NA	Q6H9V6	Enterobacteria_phage	97.2	6.7e-102
WP_001322430.1|2793516_2793732_-	hypothetical protein	NA	Q8VNN9	Enterobacteria_phage	90.2	1.1e-23
2793636:2793650	attR	AACTGGCGAAACGTA	NA	NA	NA	NA
WP_001446668.1|2793730_2793913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001280932.1|2793927_2794059_+	hypothetical protein	NA	A0A0P0ZG36	Escherichia_phage	79.1	2.6e-07
WP_032142285.1|2794061_2794529_+|lysis	lysis protein	lysis	Q6H9V3	Enterobacteria_phage	84.4	6.7e-66
WP_000830178.1|2794839_2795166_+	TonB family protein	NA	H6WZK5	Escherichia_phage	72.2	3.7e-39
WP_001322427.1|2795288_2795642_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012602757.1|2795529_2795850_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000235436.1|2796124_2796634_+|terminase	terminase	terminase	A0A1I9KFT4	Aeromonas_phage	32.7	1.6e-12
WP_001309424.1|2796605_2798534_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	66.4	1.4e-261
WP_000258993.1|2798517_2798724_+|head,tail	head-tail joining protein	head,tail	K7PM10	Enterobacteria_phage	55.4	3.0e-10
WP_001322425.1|2798720_2800313_+|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	61.1	4.9e-185
WP_001253887.1|2800302_2801751_+	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	53.1	9.9e-100
WP_000256814.1|2801787_2802135_+|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	59.1	6.8e-23
WP_000522603.1|2802192_2803221_+|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	62.2	1.4e-116
WP_000201530.1|2803272_2803647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001204533.1|2803639_2803993_+|tail	tail attachment protein	tail	A0A0K2FJB7	Enterobacteria_phage	70.1	1.9e-41
WP_000974996.1|2804008_2804542_+|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	64.6	2.5e-56
WP_000683079.1|2804538_2804934_+|tail	tail protein	tail	A0A2R9YJI2	Escherichia_phage	82.4	1.5e-58
WP_000235048.1|2804941_2805691_+|tail	phage tail protein	tail	Q687F6	Enterobacteria_phage	93.8	2.7e-125
WP_001309426.1|2805709_2806141_+|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	68.8	7.4e-43
WP_000533401.1|2806167_2806581_+|tail	phage tail assembly protein T	tail	S5MDP5	Escherichia_phage	82.8	4.6e-42
WP_000082417.1|2806561_2809123_+|tail	phage tail tape measure protein	tail	A0A2R9YJM8	Escherichia_phage	87.5	0.0e+00
WP_000847291.1|2809119_2809449_+|tail	phage tail protein	tail	Q687F2	Enterobacteria_phage	99.1	2.1e-58
WP_001309428.1|2809448_2810147_+|tail	phage minor tail protein L	tail	H6WZM3	Escherichia_phage	96.6	3.2e-128
WP_000194723.1|2810157_2810901_+|tail	phage tail protein	tail	Q6H9T4	Enterobacteria_phage	98.0	5.0e-148
WP_122991350.1|2810846_2811479_+|tail	tail assembly protein	tail	A0A0P0ZC16	Stx2-converting_phage	96.7	1.2e-102
WP_000559722.1|2811500_2811842_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000514742.1|2811822_2815515_+	DUF1983 domain-containing protein	NA	A0A0P0ZCI5	Stx2-converting_phage	85.7	0.0e+00
WP_001233148.1|2815582_2816182_+	Ail/Lom family protein	NA	H6WZM8	Escherichia_phage	94.0	7.7e-107
WP_000216486.1|2816333_2819360_+	membrane protein	NA	A0A0K2FIZ6	Escherichia_phage	54.6	1.4e-55
WP_138585047.1|2819359_2819935_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	95.3	1.2e-101
WP_000086527.1|2820032_2820623_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836769.1|2821002_2821236_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	6.4e-33
WP_120795384.1|2821304_2821418_-	Rac prophage; protein YnaM	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_001217539.1|2821844_2822093_-	DinI family protein	NA	A5LH55	Enterobacteria_phage	100.0	1.1e-38
WP_000202563.1|2822312_2823899_+	peptide chain release factor 3	NA	D0R0F5	Streptococcus_phage	25.2	2.4e-30
WP_001295748.1|2824291_2824897_+	molecular chaperone OsmY	NA	NA	NA	NA	NA
WP_000490275.1|2825023_2825185_+	DUF1328 domain-containing protein	NA	A0A0N7CBR2	Salmonella_phage	64.2	1.8e-10
>prophage 10
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	3056277	3129279	5305706	protease,tRNA,plate,transposase	Emiliania_huxleyi_virus(11.11%)	58	NA	NA
WP_001520521.1|3056277_3057630_+|protease	sigma E protease regulator RseP	protease	NA	NA	NA	NA
WP_001240896.1|3057659_3060092_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_000758956.1|3060213_3060699_+	molecular chaperone Skp	NA	NA	NA	NA	NA
WP_001139287.1|3060702_3061728_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_000210739.1|3061832_3062288_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_000565966.1|3062291_3063080_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_001550626.1|3063079_3064228_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_001550627.1|3064224_3064821_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	40.0	7.9e-27
WP_001294781.1|3064857_3068340_+	DNA polymerase III subunit alpha	NA	Q8W6C3	Saccharomonospora_phage	37.0	2.2e-209
WP_000055748.1|3068352_3069312_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
WP_001020973.1|3069409_3071551_+	lysine decarboxylase LdcC	NA	NA	NA	NA	NA
WP_000901098.1|3071607_3071997_+	VOC family protein	NA	NA	NA	NA	NA
WP_001550628.1|3072061_3073360_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_000062311.1|3073408_3073669_-	Rho-binding antiterminator	NA	NA	NA	NA	NA
WP_000417058.1|3073655_3073856_-	YaeP family protein	NA	NA	NA	NA	NA
WP_001185287.1|3074021_3074567_+	YaeQ family protein	NA	NA	NA	NA	NA
WP_000635534.1|3074563_3074986_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_000239188.1|3074999_3075710_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA	NA
WP_001550629.1|3075740_3076565_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA	NA
WP_001260708.1|3076617_3078336_-|tRNA	proline--tRNA ligase	tRNA	NA	NA	NA	NA
WP_000094022.1|3078446_3079154_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
WP_001202329.1|3079150_3079555_-	Rcs stress response system protein RcsF	NA	NA	NA	NA	NA
WP_000874224.1|3079672_3080488_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA	NA
WP_001294600.1|3080527_3081181_-	methionine ABC transporter permease MetI	NA	NA	NA	NA	NA
WP_000593994.1|3081173_3082205_-	methionine ABC transporter ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	40.2	7.2e-36
WP_001140178.1|3082391_3082964_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
WP_000997053.1|3088715_3089519_+	2,5-didehydrogluconate reductase DkgB	NA	A0A1V0SDE7	Indivirus	36.2	5.4e-39
WP_000648583.1|3089515_3090430_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001230983.1|3090670_3091471_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA	NA
WP_001550637.1|3091548_3092319_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000644685.1|3092365_3093724_-	murein transglycosylase D	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	36.0	5.8e-09
WP_001052732.1|3093795_3094551_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_001308373.1|3094584_3095307_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000917883.1|3095303_3095771_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	58.7	1.0e-50
WP_001308374.1|3095835_3096567_+	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.6	7.6e-40
WP_001086163.1|3097105_3097891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001236629.1|3098039_3098507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000908071.1|3098516_3099431_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000002621.1|3099474_3099957_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_001563736.1|3099980_3101333_-	type VI secretion system protein VasL	NA	NA	NA	NA	NA
WP_122989438.1|3101343_3104778_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_001240537.1|3104886_3106299_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_001550641.1|3106303_3107047_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA	NA
WP_032179994.1|3107043_3109863_-	type VI secretion system ATPase TssH	NA	A0A1C3S747	Escherichia_phage	30.1	5.9e-80
WP_001521863.1|3109871_3110633_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_000246418.1|3110637_3111969_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_001080149.1|3111971_3112496_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_001550643.1|3112492_3113773_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_000348804.1|3113797_3114880_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_001521865.1|3114843_3116694_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_001521866.1|3116697_3117111_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_001550644.1|3117117_3118593_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_001521869.1|3118643_3118868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001550646.1|3118902_3119403_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_001142958.1|3120099_3120618_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_001550647.1|3120827_3122969_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	24.8	1.8e-25
WP_001077735.1|3127544_3127922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024192499.1|3128142_3129279_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
>prophage 11
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	3690372	3754477	5305706	tRNA,transposase,portal,tail,capsid,integrase,head,terminase,protease,lysis	Enterobacteria_phage(51.56%)	84	3681552:3681567	3729172:3729187
3681552:3681567	attL	TGGCGTATTCCAGATT	NA	NA	NA	NA
WP_001550841.1|3690372_3691443_-|integrase	tyrosine-type recombinase/integrase	integrase	Q9MCR4	Enterobacteria_phage	99.7	4.3e-201
WP_001303849.1|3691420_3691639_-	excisionase	NA	Q77WA4	Escherichia_phage	100.0	3.7e-35
WP_000545728.1|3691678_3691846_-	hypothetical protein	NA	A0A0K2FJ46	Enterobacteria_phage	98.2	1.3e-27
WP_071591521.1|3691778_3691964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001348592.1|3692088_3692691_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000763367.1|3692901_3693123_-	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	100.0	2.9e-35
WP_001386642.1|3693221_3693503_-	cell division protein ZapA	NA	A0A0P0ZE02	Stx2-converting_phage	98.9	5.5e-47
WP_000548531.1|3693513_3693705_-	DUF1382 family protein	NA	A0A0P0ZC67	Stx2-converting_phage	100.0	7.3e-27
WP_000682318.1|3693677_3693860_-	DUF1317 domain-containing protein	NA	A0A0N7CHV0	Escherichia_phage	98.3	1.3e-28
WP_000186804.1|3693856_3694537_-	YqaJ viral recombinase family protein	NA	A0A0N6WET1	Escherichia_phage	98.7	1.3e-131
WP_001550842.1|3694533_3695319_-	phage recombination protein Bet	NA	A0A1I9LJN0	Stx_converting_phage	99.6	2.4e-148
WP_001550843.1|3695324_3695621_-	host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	99.0	6.2e-49
WP_000372937.1|3695695_3695839_-	host cell division inhibitory peptide Kil	NA	A0A0N7C2U2	Escherichia_phage	100.0	1.2e-18
WP_001198861.1|3695807_3695972_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	100.0	1.1e-26
WP_024189690.1|3696044_3696413_-	DUF2528 family protein	NA	M1FPD2	Enterobacteria_phage	99.2	5.0e-64
WP_001550845.1|3696595_3696796_-	restriction inhibitor protein ral	NA	K7P7K1	Enterobacteria_phage	100.0	1.9e-33
WP_001550846.1|3697009_3697591_+	hypothetical protein	NA	K7P6T7	Enterobacteria_phage	92.2	4.0e-92
WP_000216183.1|3697607_3697916_-	hypothetical protein	NA	A0A075B8K6	Enterobacteria_phage	70.6	7.9e-31
WP_032145726.1|3697914_3698130_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000076839.1|3698358_3699258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000250470.1|3699387_3700095_-	helix-turn-helix transcriptional regulator	NA	G9L676	Escherichia_phage	98.7	2.2e-132
WP_001180318.1|3700173_3700401_+	transcriptional regulator	NA	G9L677	Escherichia_phage	100.0	7.8e-36
WP_000438490.1|3700507_3700807_+	hypothetical protein	NA	A0A0P0ZBJ0	Stx2-converting_phage	96.0	2.0e-47
WP_000185505.1|3700839_3701739_+	replication protein	NA	A0A0K2FJ31	Enterobacteria_phage	100.0	3.8e-174
WP_001550847.1|3701735_3702437_+	replication protein P	NA	M1FJ72	Enterobacteria_phage	98.3	1.6e-127
WP_001550848.1|3702676_3706585_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
WP_072198841.1|3706785_3706887_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001053029.1|3706883_3707339_+	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	67.5	3.7e-61
WP_000224911.1|3707338_3707509_+	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	66.0	9.1e-13
WP_000774479.1|3707501_3707792_+	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
WP_001099655.1|3707788_3708151_+	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	97.4	7.3e-60
WP_000971071.1|3708147_3708288_+	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	2.5e-08
WP_001204777.1|3708373_3708751_+	antitermination protein	NA	Q777W5	Enterobacteria_phage	84.2	7.3e-55
WP_000780581.1|3708906_3709431_-	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	54.1	1.1e-48
WP_001563769.1|3709623_3710583_+	DUF523 and DUF1722 domain-containing protein	NA	NA	NA	NA	NA
WP_000839582.1|3711853_3712069_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	98.6	1.2e-33
WP_001135296.1|3712068_3712566_+	lysozyme	NA	M1FJA0	Enterobacteria_phage	97.0	1.6e-89
WP_001228695.1|3712782_3712965_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.3	2.9e-17
WP_000738423.1|3713055_3713349_-	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	91.8	2.0e-44
WP_001307652.1|3713711_3713906_-	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.8	9.7e-27
WP_000867489.1|3714293_3714839_+|terminase	terminase small subunit	terminase	A0A0K2FIG2	Enterobacteria_phage	83.3	1.2e-79
WP_138585052.1|3714813_3716739_+|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	98.8	0.0e+00
WP_000198149.1|3716735_3716942_+|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_001445654.1|3716938_3718540_+|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	98.7	3.2e-309
WP_000123230.1|3718520_3719840_+	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	98.2	6.9e-233
WP_001299443.1|3719849_3720182_+|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	100.0	1.7e-55
WP_001551189.1|3720236_3721262_+|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	96.8	7.6e-187
WP_000158895.1|3721303_3721699_+	hypothetical protein	NA	A0A2R9YJP4	Escherichia_phage	93.2	4.5e-55
WP_000752996.1|3721710_3722064_+|tail	tail attachment protein	tail	A0A2R9YJJ5	Escherichia_phage	99.1	1.5e-62
WP_000985116.1|3722075_3722654_+|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	97.9	7.8e-80
WP_000683105.1|3722650_3723046_+|tail	tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	100.0	1.0e-70
WP_001445656.1|3723053_3723794_+|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	97.6	4.7e-130
WP_000479143.1|3723809_3724232_+|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	96.4	8.2e-71
WP_000459467.1|3724213_3724648_+|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	99.2	7.6e-64
WP_001551188.1|3724640_3727202_+|tail	phage tail tape measure protein	tail	A0A0K2FI43	Enterobacteria_phage	98.5	0.0e+00
WP_000847339.1|3727198_3727528_+|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	97.2	2.8e-58
WP_001551186.1|3727527_3728226_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	97.4	8.9e-131
WP_019843054.1|3728231_3728975_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	98.4	1.2e-149
WP_000090872.1|3728911_3729544_+|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	97.1	1.2e-94
3729172:3729187	attR	TGGCGTATTCCAGATT	NA	NA	NA	NA
WP_019843055.1|3729604_3733003_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	89.9	0.0e+00
WP_001551182.1|3733070_3733670_+	Ail/Lom family outer membrane beta-barrel protein	NA	Q9EV15	Enterobacteria_phage	88.9	1.0e-98
WP_094158907.1|3733734_3736125_+|tail	phage tail protein	tail	A0A0E3M194	Enterobacteria_phage	48.5	9.9e-105
WP_000654173.1|3736121_3736403_+	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	50.0	7.0e-18
WP_060579084.1|3736412_3737117_+|tail	tail fiber domain-containing protein	tail	A0A1X7QGH6	Escherichia_phage	61.7	1.2e-58
WP_001545206.1|3737127_3737421_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001309429.1|3737532_3737670_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000240999.1|3737614_3738283_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_000937481.1|3738339_3738606_+|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	81.8	1.5e-17
WP_000799406.1|3738837_3739701_-	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.7	6.7e-11
WP_000531594.1|3739684_3740821_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	39.8	5.5e-29
WP_000359446.1|3741070_3742297_+	peptidase T	NA	NA	NA	NA	NA
WP_001295435.1|3742345_3743467_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_000735412.1|3743542_3745003_-	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
WP_001265481.1|3745002_3745674_-	two-component system response regulator PhoP	NA	NA	NA	NA	NA
WP_000423742.1|3745842_3747213_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	1.2e-107
WP_001297479.1|3747216_3747858_-	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_001295972.1|3747893_3749000_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000476103.1|3749053_3749515_-	phosphatase NudJ	NA	NA	NA	NA	NA
WP_000873387.1|3749524_3750163_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_000246191.1|3750495_3750831_-	DUF1493 family protein	NA	NA	NA	NA	NA
WP_000381622.1|3750830_3751280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001522898.1|3751861_3753112_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	98.1	6.5e-23
WP_000526135.1|3753307_3753766_+|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	32.3	2.9e-13
WP_000526135.1|3754018_3754477_+|transposase	IS200/IS605 family transposase	transposase	I4AZI8	Saccharomonospora_phage	32.3	2.9e-13
>prophage 12
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	3955805	4062349	5305706	tRNA,transposase,tail,integrase,terminase,lysis	Escherichia_phage(46.43%)	103	3946701:3946716	3989190:3989205
3946701:3946716	attL	ATCGCAGCAATAAAAA	NA	NA	NA	NA
WP_001314661.1|3955805_3957038_-	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	39.5	3.1e-17
WP_000387388.1|3957292_3958276_+	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_001551034.1|3958753_3960127_+	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_000662472.1|3960255_3961191_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.4	1.7e-145
WP_001551035.1|3961242_3962478_-|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.5	1.3e-238
WP_000079604.1|3962479_3962695_-	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_001551036.1|3962794_3962983_-	DUF1187 family protein	NA	A0A0U2QL97	Escherichia_phage	95.2	7.9e-26
WP_001317028.1|3962975_3963170_-	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_001551037.1|3963226_3964036_-	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.1	4.4e-105
WP_001551038.1|3964028_3966680_-	exodeoxyribonuclease VIII	NA	A0A0U2I1R6	Escherichia_phage	77.6	0.0e+00
WP_001314664.1|3966781_3967057_-	hypothetical protein	NA	A0A0U2QW85	Escherichia_phage	93.4	1.3e-40
WP_001551041.1|3967131_3967302_-	phage protein	NA	A0A0U2SHB5	Escherichia_phage	89.3	9.7e-23
WP_000560221.1|3967301_3967523_-	killing protein KilR	NA	A0A0U2RTC4	Escherichia_phage	98.6	3.1e-37
WP_001551042.1|3967943_3968096_-	DUF1391 domain-containing protein	NA	M4QQ57	Salicola_phage	55.3	6.0e-08
WP_001551043.1|3968549_3969026_-	DNA-binding transcriptional repressor RacR	NA	NA	NA	NA	NA
WP_001551044.1|3969149_3969446_+	toxin YdaS	NA	A0A0R6PH31	Moraxella_phage	43.5	1.6e-09
WP_001551045.1|3969468_3969891_+	phage protein	NA	A0A0U2RXZ9	Escherichia_phage	95.7	5.3e-70
WP_001551046.1|3969903_3970761_+	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	82.6	3.5e-68
WP_001551047.1|3970767_3971514_+	ATP-binding protein	NA	V5UQI5	Shigella_phage	78.5	2.4e-110
WP_001551048.1|3971536_3972298_+	DUF1627 domain-containing protein	NA	A0A0U2SAW4	Escherichia_phage	93.3	2.3e-119
WP_001403739.1|3972313_3972745_+	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	92.7	4.4e-64
WP_001551049.1|3972741_3972963_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000385105.1|3972938_3974093_+	AAA family ATPase	NA	A0A2H4UTU5	Bodo_saltans_virus	31.3	1.9e-13
WP_001551050.1|3974067_3976332_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_000940316.1|3976745_3977345_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	93.0	1.6e-107
WP_001551052.1|3977344_3977635_+	DUF1364 domain-containing protein	NA	A0A0U2KD41	Escherichia_phage	85.4	9.0e-45
WP_000640136.1|3977631_3978174_+	DUF1133 family protein	NA	A0A0U2S606	Escherichia_phage	74.0	1.4e-75
WP_000839599.1|3979455_3979671_+|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	98.6	2.0e-33
WP_001551053.1|3979670_3980168_+	lysozyme	NA	A0A1B5FP97	Escherichia_phage	97.6	1.4e-90
WP_001228688.1|3980384_3980570_+|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	96.5	3.6e-15
WP_001097895.1|3980766_3982224_+	Trk system potassium uptake protein TrkG	NA	NA	NA	NA	NA
WP_001291094.1|3982361_3983153_+	ParB N-terminal domain-containing protein	NA	R4TG31	Halovirus	40.2	2.8e-48
WP_001204037.1|3983145_3984078_+	hypothetical protein	NA	A0A1B1INP7	uncultured_Mediterranean_phage	54.9	1.4e-83
WP_000126788.1|3984055_3984265_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551055.1|3984268_3985363_+	hypothetical protein	NA	A0A0U2RXW9	Escherichia_phage	80.2	1.0e-112
WP_000625348.1|3985343_3986645_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	59.6	3.6e-149
WP_001551056.1|3986647_3988054_+	DUF4055 domain-containing protein	NA	G8C7P4	Escherichia_phage	69.2	2.3e-186
WP_001363932.1|3988037_3989150_+	hypothetical protein	NA	I6PD76	Cronobacter_phage	54.5	7.1e-114
WP_001551057.1|3989254_3990019_+	hypothetical protein	NA	G8C7P6	Escherichia_phage	61.4	1.8e-79
3989190:3989205	attR	TTTTTATTGCTGCGAT	NA	NA	NA	NA
WP_000918487.1|3990117_3991257_+	hypothetical protein	NA	G8C7P7	Escherichia_phage	75.0	7.4e-159
WP_000634214.1|3991479_3991875_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551058.1|3991874_3992258_+	hypothetical protein	NA	A0A0P0I456	Acinetobacter_phage	39.4	2.2e-14
WP_001551059.1|3992258_3992639_+	hypothetical protein	NA	A0A059VF88	Pseudomonas_phage	44.4	2.9e-19
WP_000673077.1|3992635_3993028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551060.1|3993054_3994017_+	hypothetical protein	NA	A0A059VG08	Pseudomonas_phage	38.6	3.8e-55
WP_122452218.1|3994167_3994527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032284309.1|3994634_3994835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060579026.1|3994998_3997497_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	35.1	1.7e-86
WP_077634177.1|3997500_3998232_+|tail	phage tail tape measure protein	tail	A0A0P0ZCJ4	Stx2-converting_phage	48.2	5.4e-54
WP_000024051.1|3998224_3998563_+|tail	phage tail protein	tail	H6WZM2	Escherichia_phage	50.0	4.0e-28
WP_001152425.1|3998562_3999261_+|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	95.3	1.9e-128
WP_032147653.1|3999266_4000010_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.3	2.8e-146
WP_050436738.1|3999946_4000555_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	91.6	7.1e-100
WP_001551065.1|4000615_4004095_+	host specificity protein J	NA	A5LH43	Enterobacteria_phage	89.5	0.0e+00
WP_001228337.1|4004162_4004762_+	Ail/Lom family outer membrane beta-barrel protein	NA	Q9EV15	Enterobacteria_phage	91.5	1.7e-101
WP_001551066.1|4004826_4007202_+|tail	phage tail fiber protein	tail	A0A1X7QGG5	Escherichia_phage	69.5	6.3e-168
WP_001518417.1|4007201_4007483_+	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	50.0	1.4e-18
WP_001551067.1|4007492_4008533_+|tail	tail fiber domain-containing protein	tail	A0A0E3M4A9	Enterobacteria_phage	67.6	4.9e-125
WP_000355602.1|4008575_4008869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000968130.1|4009220_4010078_-	iron/manganese ABC transporter permease subunit SitD	NA	NA	NA	NA	NA
WP_001101728.1|4010074_4010932_-	iron/manganese ABC transporter permease subunit SitC	NA	NA	NA	NA	NA
WP_000983720.1|4010928_4011756_-	iron/manganese ABC transporter ATP-binding protein SitB	NA	G9BWD6	Planktothrix_phage	28.5	3.8e-11
WP_000286867.1|4011755_4012670_-	iron/manganese ABC transporter substrate-binding protein SitA	NA	NA	NA	NA	NA
WP_001295593.1|4013256_4013691_-	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.4e-28
WP_000837902.1|4013831_4014965_-	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.8	4.8e-118
WP_001551068.1|4015326_4018851_-	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
WP_001295715.1|4019124_4019391_+	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_001523197.1|4019387_4019810_-	heat shock protein HslJ	NA	NA	NA	NA	NA
WP_000762229.1|4019920_4020910_-	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	2.5e-70
WP_001551069.1|4021117_4023757_+	YdbH family protein	NA	NA	NA	NA	NA
WP_000698145.1|4023753_4023939_+	YnbE family lipoprotein	NA	NA	NA	NA	NA
WP_001306533.1|4023946_4024273_+	YdbL family protein	NA	NA	NA	NA	NA
WP_001067519.1|4024444_4025350_-	transcriptional regulator FeaR	NA	NA	NA	NA	NA
WP_001551070.1|4025585_4027085_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
WP_000535436.1|4027143_4029417_-	primary-amine oxidase	NA	NA	NA	NA	NA
WP_001551071.1|4029664_4031710_-	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA	NA
WP_071591516.1|4031958_4032924_+	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
WP_000073393.1|4032935_4033223_+	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
WP_001551072.1|4033231_4033978_+	phenylacetate-CoA oxygenase subunit PaaC	NA	NA	NA	NA	NA
WP_001189203.1|4033992_4034490_+	phenylacetate degradation protein PaaD	NA	NA	NA	NA	NA
WP_001551073.1|4034497_4035568_+	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA	NA
WP_001551074.1|4035564_4036332_+	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA	NA
WP_001551075.1|4036331_4037120_+	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
WP_019842675.1|4037121_4038546_+	3-hydroxyacyl-CoA dehydrogenase PaaC	NA	NA	NA	NA	NA
WP_001551077.1|4038538_4038961_+	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
WP_001206190.1|4038960_4040166_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
WP_000632281.1|4040192_4041506_+	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
WP_001551078.1|4041606_4042557_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
WP_001551079.1|4042538_4043129_+	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA	NA
WP_060579170.1|4043459_4048481_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
WP_001563833.1|4048688_4049549_+	pyridoxine 4-dehydrogenase	NA	NA	NA	NA	NA
WP_000048949.1|4049662_4050268_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
WP_001551082.1|4050468_4054371_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	29.7	7.6e-54
WP_001523214.1|4054655_4054994_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001314706.1|4054980_4055430_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000343026.1|4055549_4055927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_060579171.1|4056042_4056843_+	YdcF family protein	NA	NA	NA	NA	NA
WP_000115969.1|4057039_4058479_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000048646.1|4058520_4059522_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_001306523.1|4059710_4060241_+	cytochrome b561	NA	A0A0U2QLA7	Escherichia_phage	43.9	2.0e-18
WP_000731833.1|4060485_4060659_+	periplasmic protein	NA	A0A0R6PKG1	Moraxella_phage	67.4	4.4e-07
WP_001309484.1|4060730_4060880_-	type I toxin-antitoxin system toxin HokB	NA	NA	NA	NA	NA
WP_085948682.1|4060979_4062349_-|transposase	IS3-like element IS150 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	99.5	4.8e-112
>prophage 13
NZ_CP040390	Escherichia coli strain A1_136 chromosome, complete genome	5305706	4368205	4423165	5305706	tRNA,holin,portal,tail,capsid,integrase,head,terminase	Enterobacteria_phage(43.4%)	69	4383874:4383888	4425146:4425160
WP_000672359.1|4368205_4370593_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_001551178.1|4370607_4371591_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	37.4	1.7e-34
WP_001386830.1|4371729_4371774_-	pheST operon leader peptide PheM	NA	NA	NA	NA	NA
WP_000124850.1|4371896_4372253_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_001124225.1|4372306_4372504_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_001700733.1|4372600_4373143_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	32.9	6.3e-15
WP_001144202.1|4373146_4375075_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	37.3	9.4e-130
WP_000877736.1|4375813_4377556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001551179.1|4378037_4378331_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016247637.1|4378373_4379414_-|tail	tail fiber domain-containing protein	tail	A0A0E3M4A9	Enterobacteria_phage	66.1	3.0e-122
WP_001518417.1|4379423_4379705_-	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	50.0	1.4e-18
WP_138585055.1|4379704_4382080_-|tail	phage tail protein	tail	A0A1X7QGG5	Escherichia_phage	69.5	6.3e-168
WP_094179059.1|4382144_4382744_-	Ail/Lom family outer membrane beta-barrel protein	NA	Q9EV15	Enterobacteria_phage	91.5	2.8e-101
WP_000515622.1|4382811_4386207_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	89.5	0.0e+00
4383874:4383888	attL	ATTGATACTGGCGGC	NA	NA	NA	NA
WP_000090882.1|4386267_4386870_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	85.1	6.2e-88
WP_024177847.1|4386806_4387550_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.0	1.8e-145
WP_001560932.1|4387554_4388253_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	97.8	6.8e-131
WP_000847355.1|4388252_4388582_-|tail	phage tail protein	tail	A0A2R9YJM0	Escherichia_phage	96.3	1.5e-56
WP_106106625.1|4388578_4391140_-|tail	phage tail tape measure protein	tail	A0A2R9YJM8	Escherichia_phage	86.3	0.0e+00
WP_000459457.1|4391132_4391567_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
WP_060579045.1|4391548_4391971_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	82.1	3.6e-58
WP_001577918.1|4391986_4392727_-|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	98.0	6.1e-130
WP_032244082.1|4392734_4393130_-	hypothetical protein	NA	A0A0K2FIF4	Enterobacteria_phage	97.7	1.4e-69
WP_021528534.1|4393126_4393705_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	99.0	7.8e-80
WP_000753019.1|4393716_4394070_-|tail	tail attachment protein	tail	A0A2R9YJJ5	Escherichia_phage	98.3	2.6e-62
WP_000158899.1|4394081_4394477_-	DNA-packaging protein FI	NA	A0A2R9YJP4	Escherichia_phage	92.4	2.0e-55
WP_000063260.1|4394518_4395544_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	97.1	3.4e-187
WP_060579022.1|4395599_4395932_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	99.1	1.4e-54
WP_000123236.1|4395941_4397261_-	S49 family peptidase	NA	A0A2I6TC87	Escherichia_phage	98.4	9.0e-233
WP_019842487.1|4397241_4398843_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	99.4	2.2e-310
WP_000198149.1|4398839_4399046_-|head,tail	Lambda prophage-derived head-to-tail joining protein W	head,tail	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_001027290.1|4399042_4400968_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	99.8	0.0e+00
WP_000453587.1|4400942_4401488_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.9	1.4e-94
WP_001307652.1|4401876_4402071_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.8	9.7e-27
WP_000548594.1|4402321_4402528_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	80.9	2.6e-22
WP_001019207.1|4402823_4402997_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
WP_001443523.1|4403169_4403325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071528545.1|4403472_4403661_-	cold-shock protein	NA	NA	NA	NA	NA
WP_000066495.1|4403671_4403884_-	cold shock protein CspI	NA	A0A1W6JNX5	Morganella_phage	74.3	1.2e-22
WP_001071778.1|4404247_4404745_-	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
WP_001101173.1|4404741_4405275_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	93.8	1.4e-96
WP_001557934.1|4405388_4405649_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072201599.1|4405596_4406148_-	YdfR family protein	NA	Q08JA0	Stx2-converting_phage	51.1	1.3e-36
WP_000839581.1|4406152_4406368_-|holin	holin	holin	A5LH82	Enterobacteria_phage	90.1	7.9e-30
WP_000066482.1|4407120_4407336_-	cold shock-like protein CspB	NA	A0A1W6JNX5	Morganella_phage	76.5	2.6e-25
WP_001589622.1|4407636_4407849_+	cold shock-like protein CspF	NA	NA	NA	NA	NA
WP_122990953.1|4407903_4407993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001589621.1|4408271_4409024_-	antitermination protein	NA	K7PGU5	Enterobacteria_phage	97.6	7.1e-134
WP_001589620.1|4409037_4410027_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	99.4	4.7e-194
WP_001072669.1|4410034_4410850_-	KilA-N domain-containing protein	NA	U5P4K5	Shigella_phage	99.3	8.5e-149
WP_000767110.1|4411012_4411408_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A0P0ZD39	Stx2-converting_phage	98.4	5.7e-66
WP_000210181.1|4411404_4411731_-	LexA family transcriptional regulator	NA	U5P451	Shigella_phage	100.0	9.2e-54
WP_021518588.1|4411727_4412381_-	phage N-6-adenine-methyltransferase	NA	S5M7S1	Escherichia_phage	99.1	4.3e-127
WP_001305611.1|4412380_4412875_-	PerC family transcriptional regulator	NA	A0A291AWV6	Escherichia_phage	99.4	1.5e-87
WP_060579161.1|4412871_4413813_-	helix-turn-helix domain-containing protein	NA	S5FM81	Shigella_phage	95.8	1.2e-135
WP_071789194.1|4413802_4413982_-	DUF4222 domain-containing protein	NA	S5M7S5	Escherichia_phage	68.5	4.6e-15
WP_060579163.1|4414157_4414715_-	hypothetical protein	NA	K7PGU3	Enterobacteria_phage	93.5	1.0e-92
WP_000205494.1|4414752_4414953_-	cell division protein	NA	NA	NA	NA	NA
WP_000450737.1|4415050_4415677_+	LexA family transcriptional regulator	NA	K7PM82	Enterobacteria_phage	48.8	1.9e-47
WP_000357060.1|4416044_4416548_-	hypothetical protein	NA	A0A077K9U2	Edwardsiella_phage	47.6	1.2e-31
WP_120785030.1|4416749_4416995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000135680.1|4417009_4417372_+	hypothetical protein	NA	Q8SBF8	Shigella_phage	100.0	8.6e-61
WP_000081305.1|4417437_4418262_+	YfdQ family protein	NA	Q8SBF9	Shigella_phage	98.9	2.3e-149
WP_000008178.1|4418389_4418926_+	5'-deoxynucleotidase	NA	A0A0P0ZCH9	Stx2-converting_phage	99.4	2.2e-100
WP_001242716.1|4418916_4419279_+	hypothetical protein	NA	K7PH61	Enterobacteria_phage	98.3	5.8e-65
WP_023154558.1|4419278_4419899_+	DUF551 domain-containing protein	NA	A5LH60	Enterobacteria_phage	93.2	2.5e-116
WP_029402496.1|4419898_4420147_+	helix-turn-helix domain-containing protein	NA	A5LH59	Enterobacteria_phage	98.4	1.7e-31
WP_053891200.1|4420343_4421570_+	dNTP triphosphohydrolase	NA	NA	NA	NA	NA
WP_001218280.1|4421941_4423165_-|integrase	site-specific integrase	integrase	A0A291AWU1	Escherichia_phage	97.8	1.5e-234
4425146:4425160	attR	GCCGCCAGTATCAAT	NA	NA	NA	NA
