assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005849285.1_ASM584928v1	NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	1	1071099-1073441	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	Type II-A, Type II-B,Type II-B, or Type II-C?,Type II-C	GTTGCAGCTGGACCTCAATTTCTGAAATGCTATGAT,GTTGCAGCTGGACCTCAATTTCTGAAATGCTATGAT,GTTGCAGCTGGACCTCAATTTCTGAAATGCTATGAT	36,36,36	0	0	NA	NA	NA:NA:NA	35,35,21	35	TypeII-A,TypeII-B,TypeII-B,orTypeII-C?,TypeII-C	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	NA|43aa|up_8|NZ_CP040517.1_1059557_1059686_+,NA|351aa|up_4|NZ_CP040517.1_1064963_1066016_-,NA	NA|490aa|up_9|NZ_CP040517.1_1057623_1059093_-	pfam08386, Abhydrolase_4, TAP-like protein	NA|43aa|up_8|NZ_CP040517.1_1059557_1059686_+	NA	NA|722aa|up_7|NZ_CP040517.1_1059663_1061829_+	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|632aa|up_6|NZ_CP040517.1_1061930_1063826_+	pfam00144, Beta-lactamase, Beta-lactamase	NA|360aa|up_5|NZ_CP040517.1_1063878_1064958_-	pfam11175, DUF2961, Protein of unknown function (DUF2961)	NA|351aa|up_4|NZ_CP040517.1_1064963_1066016_-	NA	NA|353aa|up_3|NZ_CP040517.1_1066150_1067209_-	cd03875, M28_Fxna_like, M28 Zn-peptidase Endoplasmic reticulum metallopeptidase 1	NA|487aa|up_2|NZ_CP040517.1_1067251_1068712_-	COG5476, COG5476, Uncharacterized conserved protein [Function unknown]	NA|428aa|up_1|NZ_CP040517.1_1068952_1070236_+	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|210aa|up_0|NZ_CP040517.1_1070279_1070909_-	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain	cas2|102aa|down_0|NZ_CP040517.1_1073513_1073819_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|303aa|down_1|NZ_CP040517.1_1073847_1074756_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1040aa|down_2|NZ_CP040517.1_1074757_1077877_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|248aa|down_3|NZ_CP040517.1_1079038_1079782_-	cd10432, BI-1-like_bacterial, Bacterial BAX inhibitor (BI)-1/YccA-like proteins	NA|164aa|down_4|NZ_CP040517.1_1079954_1080446_-	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase	NA|262aa|down_5|NZ_CP040517.1_1080568_1081354_+	PRK00481, PRK00481, NAD-dependent deacetylase; Provisional	NA|100aa|down_6|NZ_CP040517.1_1081350_1081650_+	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|255aa|down_7|NZ_CP040517.1_1081728_1082493_-	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs	NA|305aa|down_8|NZ_CP040517.1_1082594_1083509_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|329aa|down_9|NZ_CP040517.1_1083505_1084492_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
GCF_005849285.1_ASM584928v1	NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	2	2029719-2031738	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,cas2,cas1,csx16,csx1	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	Type III-C,Type III-B,Type III-D,Type III-A	GTTTGAATAACGCCCCGTTCTTCAGGGGATTGAGAC,GTTTGAATAACGCCCCGTTCTTCAGGGGATTGAGAC,GTTTGAATAACGCCCCGTTCTTCAGGGGATTGAGAC	36,36,36	0	0	NA	NA	NA:NA:NA	27,28,28	28	TypeIII-C,TypeIII-B,TypeIII-D,TypeIII-A	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	csm4gr5|314aa|up_5|NZ_CP040517.1_2024412_2025354_+,NA	NA|146aa|up_9|NZ_CP040517.1_2019838_2020276_+	PRK11920, rirA, iron-responsive transcriptional regulator RirA	cas10|853aa|up_8|NZ_CP040517.1_2020719_2023278_+	cd09680, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm2gr11|130aa|up_7|NZ_CP040517.1_2023292_2023682_+	pfam03750, Csm2_III-A, Csm2 Type III-A	csm3gr7|232aa|up_6|NZ_CP040517.1_2023699_2024395_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|314aa|up_5|NZ_CP040517.1_2024412_2025354_+	NA	csm5gr7|478aa|up_4|NZ_CP040517.1_2025350_2026784_+	TIGR01899, cas_TM1807_csm5, CRISPR type III-A/MTUBE-associated RAMP protein Csm5	cas6|315aa|up_3|NZ_CP040517.1_2026771_2027716_+	cd09760, Cas6_III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas2|94aa|up_2|NZ_CP040517.1_2027881_2028163_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|323aa|up_1|NZ_CP040517.1_2028189_2029158_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|147aa|up_0|NZ_CP040517.1_2029129_2029570_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|196aa|down_0|NZ_CP040517.1_2031843_2032431_+	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	csx16|109aa|down_1|NZ_CP040517.1_2032522_2032849_+	pfam09652, Cas_VVA1548, Putative CRISPR-associated protein (Cas_VVA1548)	csx1|384aa|down_2|NZ_CP040517.1_2032845_2033997_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	csx1|351aa|down_3|NZ_CP040517.1_2033993_2035046_+	TIGR02584, hypothetical_protein_NE0113, CRISPR-associated protein, NE0113 family	NA|481aa|down_4|NZ_CP040517.1_2036730_2038173_-	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like	NA|334aa|down_5|NZ_CP040517.1_2038263_2039265_-	PRK13971, PRK13971, 4-hydroxyproline epimerase	NA|303aa|down_6|NZ_CP040517.1_2039330_2040239_-	cd00408, DHDPS-like, Dihydrodipicolinate synthase family	NA|420aa|down_7|NZ_CP040517.1_2040495_2041755_+	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|252aa|down_8|NZ_CP040517.1_2042387_2043142_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|166aa|down_9|NZ_CP040517.1_2043215_2043713_+	pfam05544, Pro_racemase, Proline racemase
GCF_005849285.1_ASM584928v1	NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	3	2283990-2284166	3	PILER-CR	no		DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	Orphan	CAACACCGACGACAATAGCGATGACGACGGTTACGATAATGACGGCAC	48	1	1	2284107-2284135	NZ_CP040517.1_2284273-2284301	NA	2	2	Orphan	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	NA|106aa|up_5|NZ_CP040517.1_2276755_2277073_-,NA|154aa|down_0|NZ_CP040517.1_2284841_2285303_+,NA|282aa|down_8|NZ_CP040517.1_2296800_2297646_-	NA|307aa|up_9|NZ_CP040517.1_2271655_2272576_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|300aa|up_8|NZ_CP040517.1_2272717_2273617_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|499aa|up_7|NZ_CP040517.1_2273606_2275103_-	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|527aa|up_6|NZ_CP040517.1_2275099_2276680_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|106aa|up_5|NZ_CP040517.1_2276755_2277073_-	NA	NA|260aa|up_4|NZ_CP040517.1_2277453_2278233_+	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold	NA|227aa|up_3|NZ_CP040517.1_2278232_2278913_+	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_2|NZ_CP040517.1_2278909_2279980_+	TIGR02142, Molybdenum_import_ATP-binding_protein_ModC, molybdenum ABC transporter, ATP-binding protein	NA|492aa|up_1|NZ_CP040517.1_2280338_2281814_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|436aa|up_0|NZ_CP040517.1_2281806_2283114_+	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation	NA|154aa|down_0|NZ_CP040517.1_2284841_2285303_+	NA	NA|239aa|down_1|NZ_CP040517.1_2285565_2286282_+	cd02423, Peptidase_C39G, A sub-family of peptidase family C39	NA|394aa|down_2|NZ_CP040517.1_2286290_2287472_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|896aa|down_3|NZ_CP040517.1_2287735_2290423_+	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|430aa|down_4|NZ_CP040517.1_2290391_2291681_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|715aa|down_5|NZ_CP040517.1_2291730_2293875_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|364aa|down_6|NZ_CP040517.1_2293934_2295026_-	pfam06032, DUF917, Protein of unknown function (DUF917)	NA|528aa|down_7|NZ_CP040517.1_2295022_2296606_-	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|282aa|down_8|NZ_CP040517.1_2296800_2297646_-	NA	NA|460aa|down_9|NZ_CP040517.1_2297832_2299212_-	PRK07480, PRK07480, putative aminotransferase; Validated
GCF_005849285.1_ASM584928v1	NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	4	2284324-2284415	3	CRISPRCasFinder	no		DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	Orphan	GATGACTGGCTCGACAATGACGG	23	0	0	NA	NA	NA	1	1	Orphan	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	NA|106aa|up_5|NZ_CP040517.1_2276755_2277073_-,NA|154aa|down_0|NZ_CP040517.1_2284841_2285303_+,NA|282aa|down_8|NZ_CP040517.1_2296800_2297646_-	NA|307aa|up_9|NZ_CP040517.1_2271655_2272576_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|300aa|up_8|NZ_CP040517.1_2272717_2273617_+	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p	NA|499aa|up_7|NZ_CP040517.1_2273606_2275103_-	cd07786, FGGY_EcGK_like, Escherichia coli glycerol kinase-like proteins; belongs to the FGGY family of carbohydrate kinases	NA|527aa|up_6|NZ_CP040517.1_2275099_2276680_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|106aa|up_5|NZ_CP040517.1_2276755_2277073_-	NA	NA|260aa|up_4|NZ_CP040517.1_2277453_2278233_+	cd13539, PBP2_AvModA, Substrate binding domain of ModA/WtpA from Azotobacter vinelandii and its closest homologs;the type 2 periplasmic binding protein fold	NA|227aa|up_3|NZ_CP040517.1_2278232_2278913_+	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism]	NA|357aa|up_2|NZ_CP040517.1_2278909_2279980_+	TIGR02142, Molybdenum_import_ATP-binding_protein_ModC, molybdenum ABC transporter, ATP-binding protein	NA|492aa|up_1|NZ_CP040517.1_2280338_2281814_+	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]	NA|436aa|up_0|NZ_CP040517.1_2281806_2283114_+	pfam13557, Phenol_MetA_deg, Putative MetA-pathway of phenol degradation	NA|154aa|down_0|NZ_CP040517.1_2284841_2285303_+	NA	NA|239aa|down_1|NZ_CP040517.1_2285565_2286282_+	cd02423, Peptidase_C39G, A sub-family of peptidase family C39	NA|394aa|down_2|NZ_CP040517.1_2286290_2287472_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|896aa|down_3|NZ_CP040517.1_2287735_2290423_+	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription]	NA|430aa|down_4|NZ_CP040517.1_2290391_2291681_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|715aa|down_5|NZ_CP040517.1_2291730_2293875_-	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel	NA|364aa|down_6|NZ_CP040517.1_2293934_2295026_-	pfam06032, DUF917, Protein of unknown function (DUF917)	NA|528aa|down_7|NZ_CP040517.1_2295022_2296606_-	COG0145, HyuA, N-methylhydantoinase A/acetone carboxylase, beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|282aa|down_8|NZ_CP040517.1_2296800_2297646_-	NA	NA|460aa|down_9|NZ_CP040517.1_2297832_2299212_-	PRK07480, PRK07480, putative aminotransferase; Validated
GCF_005849285.1_ASM584928v1	NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	5	3033190-3034743	4,3,4	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	Type II-A, Type II-B,Type II-B, or Type II-C?,Type II-C	GTCATAGCTTCCCTTTTCACACCGATAGGCTATGAT,GTCATAGCTTCCCTTTTCACACCGATAGGCTATGAT,GTCATAGCTTCCCTTTTCACACCGATAGGCTATGAT	36,36,36	0	0	NA	NA	NA:NA:NA	23,23,20	23	TypeII-A,TypeII-B,TypeII-B,orTypeII-C?,TypeII-C	DEDDh,csa3,DinG,WYL,cas2,cas1,cas9,cas3,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,cas6,csx16,csx1	NA|65aa|up_7|NZ_CP040517.1_3019815_3020010_+,NA|58aa|up_0|NZ_CP040517.1_3032984_3033158_-,NA	NA|544aa|up_9|NZ_CP040517.1_3016293_3017925_-	PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated	NA|457aa|up_8|NZ_CP040517.1_3018340_3019711_+	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain	NA|65aa|up_7|NZ_CP040517.1_3019815_3020010_+	NA	NA|379aa|up_6|NZ_CP040517.1_3020212_3021349_+	cd06164, S2P-M50_SpoIVFB_CBS, SpoIVFB Site-2 protease (S2P), a zinc metalloprotease (MEROPS family M50B), regulates intramembrane proteolysis (RIP), and is involved in the pro-sigmaK pathway of bacterial spore formation	NA|514aa|up_5|NZ_CP040517.1_3021385_3022927_-	PRK08312, PRK08312, indolepyruvate oxidoreductase subunit beta family protein	NA|724aa|up_4|NZ_CP040517.1_3022939_3025111_-	COG4231, COG4231, Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	NA|262aa|up_3|NZ_CP040517.1_3025258_3026044_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|457aa|up_2|NZ_CP040517.1_3026568_3027939_+	COG5388, COG5388, Uncharacterized protein conserved in bacteria [Function unknown]	NA|1618aa|up_1|NZ_CP040517.1_3028043_3032897_+	pfam05088, Bac_GDH, Bacterial NAD-glutamate dehydrogenase	NA|58aa|up_0|NZ_CP040517.1_3032984_3033158_-	NA	cas2|114aa|down_0|NZ_CP040517.1_3034789_3035131_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_1|NZ_CP040517.1_3035137_3036043_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1028aa|down_2|NZ_CP040517.1_3036107_3039191_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|126aa|down_3|NZ_CP040517.1_3039400_3039778_-	COG2146, {NirD}, Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases [Inorganic ion transport and metabolism / General function prediction only]	NA|96aa|down_4|NZ_CP040517.1_3039795_3040083_-	PRK12863, PRK12863, YciI-like protein; Reviewed	NA|342aa|down_5|NZ_CP040517.1_3040130_3041156_-	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase	NA|370aa|down_6|NZ_CP040517.1_3041214_3042324_-	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|318aa|down_7|NZ_CP040517.1_3042434_3043388_+	PRK00072, hemC, porphobilinogen deaminase; Reviewed	NA|263aa|down_8|NZ_CP040517.1_3043384_3044173_+	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme	NA|470aa|down_9|NZ_CP040517.1_3044169_3045579_+	COG4223, COG4223, Uncharacterized protein conserved in bacteria [Function unknown]
