The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	3145891	494883	542663	3145891	portal,tail,head,tRNA,capsid,protease	Paracoccus_phage(11.76%)	54	NA	NA
WP_138379102.1|494883_497274_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_138379103.1|497291_498368_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2I2L4E3	Orpheovirus	34.8	6.8e-29
WP_138379104.1|498469_498832_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_138379105.1|498843_499041_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_138379106.1|499456_500389_+	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_138379107.1|500561_503672_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	23.8	4.6e-86
WP_138379108.1|503675_504755_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_138379109.1|505360_505564_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168190227.1|505653_506175_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	38.9	2.1e-15
WP_138379110.1|506299_508225_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.8	1.4e-120
WP_138379111.1|508426_509206_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_138379112.1|509225_510104_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_138379113.1|510132_510906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138379114.1|511044_511908_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_138379115.1|511904_513044_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_138379116.1|513048_513717_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_138379117.1|514107_514344_-	DUF3126 family protein	NA	NA	NA	NA	NA
WP_138379118.1|514353_514941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_168190228.1|515293_515611_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_138379120.1|515890_516487_+	DUF1013 domain-containing protein	NA	NA	NA	NA	NA
WP_138379121.1|516772_516943_-	DUF465 domain-containing protein	NA	NA	NA	NA	NA
WP_138379122.1|517143_517746_-	TIGR02444 family protein	NA	NA	NA	NA	NA
WP_138379123.1|517822_518062_+	DUF465 domain-containing protein	NA	NA	NA	NA	NA
WP_138379124.1|518196_518937_-	GGDEF domain-containing protein	NA	G3MA91	Bacillus_virus	30.8	1.2e-13
WP_138379125.1|519214_519709_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	48.1	2.0e-20
WP_138379126.1|519753_520851_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_138379127.1|520931_521573_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138381262.1|521758_522406_-	COQ9 family protein	NA	NA	NA	NA	NA
WP_138379128.1|522628_522835_+	30S ribosomal protein S21	NA	M1HLV7	Pelagibacter_phage	52.5	6.9e-07
WP_138379129.1|522930_523401_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_168190229.1|523387_524413_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_138379131.1|524487_525225_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379132.1|525196_526045_+	phosphotransferase	NA	NA	NA	NA	NA
WP_138379133.1|526129_526324_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379134.1|526769_527264_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379135.1|527263_528595_+	DNA-packaging protein	NA	A0A1V0DY66	Dinoroseobacter_phage	38.7	9.2e-76
WP_138379136.1|528805_530029_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	44.1	9.3e-83
WP_138381263.1|530079_530385_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379137.1|530381_530903_+|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	56.3	4.0e-35
WP_138379138.1|530906_532106_+|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	46.8	8.5e-97
WP_138379139.1|532184_532736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379140.1|532732_533059_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
WP_138379141.1|533055_533394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379142.1|533390_533798_+	DUF3168 domain-containing protein	NA	A0A0K1LLG5	Bacillus_phage	30.7	5.4e-11
WP_138379143.1|533813_534227_+|tail	phage major tail protein, TP901-1 family	tail	A0A1J0GVL1	Pseudoalteromonas_phage	31.1	3.3e-08
WP_138379144.1|534251_534587_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_138379145.1|534583_534811_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_138379146.1|534791_535133_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138379147.1|535263_535836_+|tail	phage tail tape measure protein	tail	D6PEW0	uncultured_phage	30.7	6.6e-07
WP_138379148.1|535835_538184_+	DUF2460 domain-containing protein	NA	A0A0P1KKK5	Acinetobacter_phage	37.7	3.6e-67
WP_138379149.1|538299_539142_+	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	37.5	4.2e-50
WP_138379150.1|539157_539865_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138379151.1|539881_540400_+	glycoside hydrolase	NA	NA	NA	NA	NA
WP_168190230.1|540404_542663_+	hypothetical protein	NA	M4QNR6	Tetraselmis_viridis_virus	33.6	5.0e-90
>prophage 2
NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	3145891	1266663	1273431	3145891	tRNA	uncultured_Mediterranean_phage(87.5%)	9	NA	NA
WP_138379721.1|1266663_1267479_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	38.0	7.7e-41
WP_138379722.1|1267481_1268078_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	49.7	9.2e-44
WP_138379723.1|1268228_1268462_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	66.7	2.9e-09
WP_138379724.1|1268481_1268841_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_138379725.1|1268837_1269659_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.6	3.5e-57
WP_138379726.1|1269651_1270926_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.6	3.8e-103
WP_138381297.1|1270925_1271705_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	38.4	7.9e-35
WP_138379727.1|1271704_1272361_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	45.3	5.2e-32
WP_138379728.1|1272384_1273431_+	M23 family metallopeptidase	NA	Q8SBN9	Clostridium_phage	42.3	2.6e-17
>prophage 3
NZ_CP040517	Emcibacter sp. MEBiC09520 chromosome, complete genome	3145891	1606820	1621019	3145891	tRNA	uncultured_Mediterranean_phage(50.0%)	10	NA	NA
WP_138380004.1|1606820_1607993_-	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	37.6	2.0e-58
WP_138380005.1|1608056_1608980_-	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	53.9	2.2e-23
WP_138380006.1|1608976_1610017_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_138380007.1|1610988_1612131_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	53.7	1.9e-101
WP_138380008.1|1612127_1613168_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_138380009.1|1613240_1613771_-	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	49.7	2.3e-38
WP_138380010.1|1613794_1614310_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	50.6	2.3e-35
WP_138380011.1|1614316_1617124_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.6	6.4e-103
WP_138380012.1|1617461_1617938_-	single-stranded DNA-binding protein	NA	A0A0U2C0X4	Paracoccus_phage	63.6	2.2e-40
WP_138380013.1|1618139_1621019_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	63.8	0.0e+00
