The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040515	Bacillus paranthracis strain PR1 chromosome, complete genome	5319903	558064	598513	5319903	transposase,protease,coat	Streptococcus_phage(12.5%)	51	NA	NA
WP_138320802.1|558064_558778_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001180555.1|558924_559110_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001002987.1|559123_559372_+|coat	spore coat protein	coat	NA	NA	NA	NA
WP_138320804.1|559368_560568_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
WP_000666170.1|560590_561604_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_000713766.1|561660_562308_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_044791041.1|562451_562979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070807095.1|563353_563743_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138320808.1|563866_564253_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000218967.1|564976_565342_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	48.6	6.7e-21
WP_000026900.1|565383_565767_+	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_000640869.1|566023_566368_+	DNA primase	NA	NA	NA	NA	NA
WP_000568169.1|566380_566680_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_000424933.1|566832_567177_+	hypothetical protein	NA	NA	NA	NA	NA
WP_138320810.1|567709_568735_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.6	2.9e-29
WP_000359556.1|568727_569393_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_044791042.1|569416_570229_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000722401.1|570301_571108_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000929157.1|571346_572132_+	Fe-S cluster assembly ATPase SufC	NA	A0A285PWH2	Cedratvirus	25.8	7.5e-09
WP_000152165.1|572147_573440_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA	NA
WP_001020761.1|573439_574660_+	cysteine desulfurase SufS	NA	Q2XUY6	environmental_halophage	48.1	3.6e-119
WP_000009523.1|574649_575081_+	iron-sulfur cluster assembly scaffold protein SufU	NA	A0A0K1LS29	Mycobacterium_phage	37.6	1.5e-14
WP_001118823.1|575129_576527_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_138320813.1|577207_578599_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000248463.1|578664_578967_+	DUF1805 domain-containing protein	NA	NA	NA	NA	NA
WP_138320815.1|579021_579753_+	sporulation protein YunB	NA	NA	NA	NA	NA
WP_000944673.1|579790_580774_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_000166370.1|580963_581860_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_000272743.1|581880_582360_-	YbaK/EbsC family protein	NA	NA	NA	NA	NA
WP_138320817.1|582434_582989_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_138320819.1|583241_583685_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002163480.1|583707_584523_-|protease	YhfC family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_138320821.1|584608_585340_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000744209.1|585377_585953_-	hypothetical protein	NA	NA	NA	NA	NA
WP_138320823.1|586071_586374_+	DUF1027 domain-containing protein	NA	NA	NA	NA	NA
WP_138320825.1|586410_586911_-	cytoplasmic protein	NA	NA	NA	NA	NA
WP_000392606.1|587283_587550_-	DUF3055 domain-containing protein	NA	NA	NA	NA	NA
WP_000439090.1|587567_588539_-	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
WP_000274015.1|588686_589127_+	DUF86 domain-containing protein	NA	NA	NA	NA	NA
WP_000503352.1|589198_589831_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000276467.1|589940_590705_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA	NA
WP_044790599.1|590995_592186_-|transposase	IS256 family transposase	transposase	A0A0N9STL0	Staphylococcus_phage	37.9	8.1e-31
WP_000683455.1|592359_592941_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_044791002.1|593551_594031_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000665103.1|594054_594546_-	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	53.8	3.5e-41
WP_000581272.1|594666_595668_+|coat	spore coat protein CotS	coat	NA	NA	NA	NA
WP_138320827.1|595729_595945_-	carbonic anhydrase	NA	NA	NA	NA	NA
WP_000431159.1|596139_596376_-	NifU family protein	NA	Q58MC7	Prochlorococcus_phage	46.6	2.0e-10
WP_000248594.1|596582_596891_+	YuzD family protein	NA	NA	NA	NA	NA
WP_014481777.1|596942_597737_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_000379274.1|597835_598513_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 2
NZ_CP040515	Bacillus paranthracis strain PR1 chromosome, complete genome	5319903	1547259	1622361	5319903	terminase,head,tRNA,integrase,portal,protease,tail	Bacillus_phage(66.04%)	92	1545397:1545412	1577298:1577313
1545397:1545412	attL	CAGTTAAAAGAAAATT	NA	NA	NA	NA
WP_044821769.1|1547259_1548390_-|integrase	site-specific integrase	integrase	A0A0U4JNS1	Bacillus_phage	38.8	8.1e-65
WP_098756208.1|1548728_1549538_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042512228.1|1549538_1550402_+	DUF3037 domain-containing protein	NA	NA	NA	NA	NA
WP_042512229.1|1550489_1550834_-	helix-turn-helix transcriptional regulator	NA	A0A1B1P888	Bacillus_phage	38.4	7.2e-17
WP_074544099.1|1551271_1552369_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074544100.1|1552381_1552531_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000153814.1|1552793_1553162_-	helix-turn-helix transcriptional regulator	NA	A0A2H4J6F9	uncultured_Caudovirales_phage	39.6	4.1e-10
WP_000516834.1|1553380_1553608_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000284333.1|1553659_1553860_+	helix-turn-helix domain-containing protein	NA	A0A0U4IIS1	Bacillus_phage	48.0	3.9e-07
WP_042512231.1|1553916_1554081_+	hypothetical protein	NA	A0A0U3B230	Bacillus_phage	90.7	3.9e-21
WP_042512232.1|1554110_1554287_+	hypothetical protein	NA	A0A0U3SQC4	Bacillus_phage	93.1	1.1e-24
WP_138321198.1|1554293_1555181_+	DnaD domain protein	NA	A0A1B1P7T6	Bacillus_phage	96.0	5.4e-48
WP_098756210.1|1555149_1555953_+	ATP-binding protein	NA	A0A1B1P7U2	Bacillus_phage	99.2	2.5e-145
WP_098756211.1|1555967_1556162_+	hypothetical protein	NA	A0A0U3K3J8	Bacillus_phage	81.2	5.5e-22
WP_098756212.1|1556178_1556457_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	A0A2I7SC16	Paenibacillus_phage	51.2	6.0e-14
WP_087997019.1|1556449_1556809_+	cell division protein SepF	NA	A0A1B1P7A1	Bacillus_phage	53.3	1.4e-31
WP_000717826.1|1556828_1556996_+	DUF3954 domain-containing protein	NA	A0A1B0T6B8	Bacillus_phage	62.3	1.4e-13
WP_074565272.1|1557021_1557273_+	helix-turn-helix domain containing protein	NA	A0A1B1P7W1	Bacillus_phage	50.0	3.4e-16
WP_098756213.1|1557292_1557802_+	dUTPase	NA	A0A1L2JY27	Aeribacillus_phage	45.4	7.9e-28
WP_167495097.1|1557840_1557987_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001037529.1|1558025_1558211_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061131574.1|1558407_1558632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_167495098.1|1559571_1559745_+	hypothetical protein	NA	Q2I8C4	Bacillus_phage	49.1	2.9e-06
WP_138321200.1|1559777_1560062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_098756215.1|1560095_1560359_+	hypothetical protein	NA	A0A0U3K3K8	Bacillus_phage	98.9	5.1e-39
WP_000033083.1|1560580_1560829_+	helix-turn-helix transcriptional regulator	NA	A0A0U3J7D7	Bacillus_phage	100.0	8.8e-41
WP_098756216.1|1561053_1561383_+	permease	NA	NA	NA	NA	NA
WP_000645582.1|1561400_1561523_+	DUF3983 domain-containing protein	NA	NA	NA	NA	NA
WP_098486940.1|1561638_1561800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_061185055.1|1561827_1562310_+	ArpU family transcriptional regulator	NA	H0USV3	Bacillus_phage	82.5	3.8e-72
WP_001012162.1|1562309_1562852_+|integrase	site-specific integrase	integrase	W8CYP1	Bacillus_phage	92.2	2.9e-89
WP_080444475.1|1563188_1563371_+	hypothetical protein	NA	D2XR59	Bacillus_phage	88.3	5.1e-22
WP_061185054.1|1563583_1563838_+	hypothetical protein	NA	H0USV8	Bacillus_phage	67.7	3.6e-13
WP_061185053.1|1563861_1564074_+	hypothetical protein	NA	H0USV9	Bacillus_phage	87.1	1.2e-27
WP_061185052.1|1564206_1564431_+	hypothetical protein	NA	A0A2H4J6K4	uncultured_Caudovirales_phage	94.6	1.3e-30
WP_001139457.1|1564688_1565066_+	HNH endonuclease	NA	A0A0S2GLI5	Bacillus_phage	97.6	5.8e-68
WP_000242929.1|1565195_1565699_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4J8E3	uncultured_Caudovirales_phage	100.0	2.3e-88
WP_048519764.1|1565700_1567395_+|terminase	terminase large subunit	terminase	A0A2H4JB98	uncultured_Caudovirales_phage	99.6	0.0e+00
WP_138321201.1|1567583_1568837_+|portal	phage portal protein	portal	A0A2H4J371	uncultured_Caudovirales_phage	96.9	2.4e-235
WP_001259163.1|1568823_1569534_+|protease	Clp protease ClpP	protease	W8CYT5	Bacillus_phage	94.9	8.2e-124
WP_138321203.1|1570764_1571052_+|head,tail	phage gp6-like head-tail connector protein	head,tail	H0USW7	Bacillus_phage	95.8	1.4e-42
WP_138321205.1|1571038_1571362_+|head	phage head closure protein	head	A0A2H4J374	uncultured_Caudovirales_phage	96.3	4.1e-54
WP_016718563.1|1571354_1571792_+|head,tail	head-tail joining protein	head,tail	A0A2H4J368	uncultured_Caudovirales_phage	100.0	2.3e-76
WP_138321207.1|1571788_1572148_+	DUF3168 domain-containing protein	NA	W8CYY6	Bacillus_phage	92.4	1.8e-58
WP_098756342.1|1572148_1572757_+|tail	phage tail protein	tail	W8CYT6	Bacillus_phage	92.6	4.2e-100
WP_138321209.1|1572807_1573125_+	hypothetical protein	NA	A0A288WFU2	Bacillus_phage	92.4	2.3e-49
WP_000344046.1|1573154_1573331_+	hypothetical protein	NA	I3WTY5	Bacillus_phage	86.2	7.2e-21
WP_138321211.1|1573346_1577198_+|tail	phage tail tape measure protein	tail	A0A2H4J380	uncultured_Caudovirales_phage	95.2	0.0e+00
WP_138321213.1|1577212_1578694_+|tail	phage tail family protein	tail	H0USX4	Bacillus_phage	91.5	4.8e-275
1577298:1577313	attR	CAGTTAAAAGAAAATT	NA	NA	NA	NA
WP_138321215.1|1578690_1582770_+	hypothetical protein	NA	H0USX5	Bacillus_phage	82.0	0.0e+00
WP_138321217.1|1582792_1583242_+	hypothetical protein	NA	A0A2H4J6F8	uncultured_Caudovirales_phage	96.0	1.5e-78
WP_000398738.1|1583412_1583649_+	hypothetical protein	NA	A0A2H4J382	uncultured_Caudovirales_phage	100.0	1.2e-18
WP_000253959.1|1583648_1583888_+	hypothetical protein	NA	A0A2H4J378	uncultured_Caudovirales_phage	100.0	1.0e-33
WP_098756270.1|1583884_1584949_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JAS1	uncultured_Caudovirales_phage	96.0	6.9e-199
WP_138321219.1|1584987_1585512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_074543752.1|1585894_1586743_+	AraC family transcriptional regulator	NA	A0A1B0RXG1	Streptococcus_phage	38.6	2.7e-20
WP_138321221.1|1586866_1587358_-	hypothetical protein	NA	Q3HL01	Bacillus_phage	85.3	5.2e-69
WP_001237240.1|1587350_1587563_-	helix-turn-helix domain-containing protein	NA	Q2I8E4	Bacillus_phage	95.7	2.3e-29
WP_001267634.1|1587746_1588049_+	hypothetical protein	NA	Q2I8E3	Bacillus_phage	90.0	1.0e-46
WP_098756267.1|1588052_1588235_+	hypothetical protein	NA	Q2I8E2	Bacillus_phage	88.3	1.7e-20
WP_074543749.1|1588352_1589534_+	cell division protein FtsK	NA	A0A288WFS1	Bacillus_phage	85.5	8.4e-198
WP_002163540.1|1589475_1590093_+	hypothetical protein	NA	Q2LIA9	Bacillus_phage	88.6	2.5e-100
WP_000872145.1|1590377_1590878_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_001984764.1|1590939_1591113_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_000246478.1|1591241_1591748_+	RsfA family transcriptional regulator	NA	G3MB11	Bacillus_virus	35.5	1.0e-11
WP_000506707.1|1591783_1592257_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_052587750.1|1592550_1593441_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_000403051.1|1593520_1595137_+	bacillithiol biosynthesis cysteine-adding enzyme BshC	NA	NA	NA	NA	NA
WP_000481789.1|1595505_1596438_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_000067081.1|1596453_1596816_+	cell division protein FtsL	NA	NA	NA	NA	NA
WP_044791553.1|1596888_1598988_+	penicillin-binding protein	NA	NA	NA	NA	NA
WP_001266227.1|1599069_1600986_+	stage V sporulation protein D	NA	NA	NA	NA	NA
WP_000766299.1|1601194_1602670_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_000893058.1|1602692_1603667_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_138321223.1|1603667_1605020_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_000753511.1|1605110_1606202_+	stage V sporulation protein E	NA	NA	NA	NA	NA
WP_001265415.1|1606307_1607402_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_000437033.1|1607463_1608369_+	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA	NA
WP_138321225.1|1608467_1609238_+	cell division protein DivIB	NA	NA	NA	NA	NA
WP_001087553.1|1609639_1610947_+	cell division protein FtsA	NA	NA	NA	NA	NA
WP_000888991.1|1610986_1612141_+	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_000261994.1|1612456_1613374_+	sigma-E processing peptidase SpoIIGA	NA	NA	NA	NA	NA
WP_000976948.1|1613393_1614113_+	RNA polymerase sporulation sigma factor SigE	NA	A0A2H4JC68	uncultured_Caudovirales_phage	42.9	3.3e-19
WP_000197753.1|1614270_1615050_+	RNA polymerase sporulation sigma factor SigG	NA	A0A0Y0AU18	Bacillus_phage	43.5	5.8e-46
WP_001998116.1|1615217_1615502_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA	NA
WP_001209002.1|1615619_1616438_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
WP_000218033.1|1616434_1617109_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000119138.1|1617128_1617599_+	cell division protein SepF	NA	NA	NA	NA	NA
WP_000450919.1|1617605_1617869_+	YggT family protein	NA	NA	NA	NA	NA
WP_000029726.1|1617884_1618652_+	RNA-binding protein	NA	NA	NA	NA	NA
WP_001131612.1|1618741_1619248_+	septum site-determining protein DivIVA	NA	NA	NA	NA	NA
WP_000455926.1|1619595_1622361_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2P1ELB8	Moumouvirus	27.3	4.1e-86
>prophage 3
NZ_CP040515	Bacillus paranthracis strain PR1 chromosome, complete genome	5319903	4983571	4991944	5319903		Synechococcus_phage(50.0%)	8	NA	NA
WP_000088582.1|4983571_4984159_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	37.1	5.9e-27
WP_001262432.1|4984155_4985196_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	45.9	7.2e-68
WP_000879024.1|4985298_4986714_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	3.3e-55
WP_000055576.1|4986698_4988918_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	41.2	1.7e-162
WP_000666779.1|4988901_4989585_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_000278826.1|4989581_4989836_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_001170542.1|4989828_4990548_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	44.3	5.2e-49
WP_000625677.1|4990636_4991944_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	25.5	4.9e-21
