assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	1	16411-16544	1	CRISPRCasFinder	no		cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	ACGCCGCATCCGGCATTCAGTGCCTGATGCGACGCTG	37	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|369aa|up_9|NZ_CP040443.1_6032_7139_-	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)	NA|156aa|up_8|NZ_CP040443.1_7131_7599_-	cd03358, LbH_WxcM_N_like, WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain	NA|137aa|up_7|NZ_CP040443.1_7585_7996_-	cd20292, cupin_QdtA-like, sugar 3,4-ketoisomerase QdtA and related proteins, cupin domain	NA|292aa|up_6|NZ_CP040443.1_8013_8889_-	PRK15480, PRK15480, glucose-1-phosphate thymidylyltransferase RfbA; Provisional	NA|300aa|up_5|NZ_CP040443.1_8947_9847_-	PRK09987, PRK09987, dTDP-4-dehydrorhamnose reductase; Provisional	NA|362aa|up_4|NZ_CP040443.1_9846_10932_-	PRK10084, PRK10084, dTDP-glucose 4,6 dehydratase; Provisional	NA|298aa|up_3|NZ_CP040443.1_11303_12197_-	PRK10122, PRK10122, UTP--glucose-1-phosphate uridylyltransferase GalF	NA|465aa|up_2|NZ_CP040443.1_12371_13766_-	PRK10123, wcaM, putative colanic acid biosynthesis protein; Provisional	NA|407aa|up_1|NZ_CP040443.1_13776_14997_-	TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL	NA|427aa|up_0|NZ_CP040443.1_14993_16274_-	TIGR04006, wcaK, colanic acid biosynthesis pyruvyl transferase WcaK	NA|493aa|down_0|NZ_CP040443.1_16646_18125_-	PRK10459, PRK10459, MOP flippase family protein	NA|465aa|down_1|NZ_CP040443.1_18126_19521_-	PRK10124, PRK10124, putative UDP-glucose lipid carrier transferase; Provisional	NA|457aa|down_2|NZ_CP040443.1_19575_20946_-	PRK15414, PRK15414, phosphomannomutase	NA|479aa|down_3|NZ_CP040443.1_21315_22752_-	PRK15460, cpsB, mannose-1-phosphate guanyltransferase; Provisional	NA|408aa|down_4|NZ_CP040443.1_22754_23978_-	TIGR04007, wcaI, colanic acid biosynthesis glycosyl transferase WcaI	NA|160aa|down_5|NZ_CP040443.1_23974_24454_-	PRK15434, PRK15434, GDP-mannose mannosyl hydrolase	NA|322aa|down_6|NZ_CP040443.1_24456_25422_-	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs	NA|374aa|down_7|NZ_CP040443.1_25424_26546_-	COG1089, Gmd, GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]	NA|183aa|down_8|NZ_CP040443.1_26572_27121_-	TIGR04008, WcaF, colanic acid biosynthesis acetyltransferase WcaF	NA|249aa|down_9|NZ_CP040443.1_27200_27947_-	PRK10063, PRK10063, colanic acid biosynthesis glycosyltransferase WcaE
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	2	752995-754912	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAC,CGGTTTATCCCCGCTGGCGCGGGGAACAC,GGTTTATCCCCGCTGGCGCGGGGAACAC	29,29,28	4	4	754791-754822|754852-754883|754791-754823|754852-754884	NZ_CP040443.1_81103-81072|NZ_CP040443.1_84032-84063|NZ_CP040443.1_81103-81071|NZ_CP040443.1_84032-84064	I-E:I-E:I-E	31,31,15	31	TypeI-E	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|254aa|up_9|NZ_CP040443.1_744870_745632_-	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|350aa|up_8|NZ_CP040443.1_745612_746662_-	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|160aa|up_7|NZ_CP040443.1_746658_747138_-	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|237aa|up_6|NZ_CP040443.1_747137_747848_-	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|104aa|up_5|NZ_CP040443.1_747866_748178_-	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|108aa|up_4|NZ_CP040443.1_748371_748695_-	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|202aa|up_3|NZ_CP040443.1_748744_749350_-	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|476aa|up_2|NZ_CP040443.1_749349_750777_-	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|303aa|up_1|NZ_CP040443.1_750778_751687_-	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|346aa|up_0|NZ_CP040443.1_751937_752975_+	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	cas2|98aa|down_0|NZ_CP040443.1_755008_755302_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP040443.1_755298_756222_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP040443.1_756218_756869_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP040443.1_756850_757597_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP040443.1_757607_758663_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|180aa|down_5|NZ_CP040443.1_758674_759214_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|520aa|down_6|NZ_CP040443.1_759210_760770_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|886aa|down_7|NZ_CP040443.1_761234_763892_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|51aa|down_8|NZ_CP040443.1_764130_764283_-	pfam01848, HOK_GEF, Hok/gef family	NA|245aa|down_9|NZ_CP040443.1_764546_765281_-	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	3	780398-780975	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Unclear	CGGTTTATCCCCGCTCGCGCGGGGAACTC,CGGTTTATCCCCGCTCGCGCGGGGAACTC,CGGTTTATCCCCGCTCGCGCGGGGAACTC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	9,9,8	9	Unclear	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|424aa|up_9|NZ_CP040443.1_769635_770907_+	PRK10015, PRK10015, oxidoreductase; Provisional	NA|87aa|up_8|NZ_CP040443.1_770897_771158_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]	NA|192aa|up_7|NZ_CP040443.1_771174_771750_+	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]	NA|287aa|up_6|NZ_CP040443.1_771896_772757_-	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|260aa|up_5|NZ_CP040443.1_772753_773533_-	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|446aa|up_4|NZ_CP040443.1_773510_774848_-	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily	NA|485aa|up_3|NZ_CP040443.1_774941_776396_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|262aa|up_2|NZ_CP040443.1_776465_777251_-	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs	NA|426aa|up_1|NZ_CP040443.1_777569_778847_+	cd06174, MFS, Major Facilitator Superfamily	NA|493aa|up_0|NZ_CP040443.1_778873_780352_+	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins	NA|224aa|down_0|NZ_CP040443.1_781312_781984_-	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|201aa|down_1|NZ_CP040443.1_782156_782759_+	COG1704, LemA, Uncharacterized conserved protein [Function unknown]	NA|299aa|down_2|NZ_CP040443.1_782772_783669_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|301aa|down_3|NZ_CP040443.1_783665_784568_+	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only]	NA|433aa|down_4|NZ_CP040443.1_784627_785926_-	PRK00077, eno, enolase; Provisional	NA|546aa|down_5|NZ_CP040443.1_786014_787652_-	PRK05380, pyrG, CTP synthetase; Validated	NA|264aa|down_6|NZ_CP040443.1_787879_788671_-	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|745aa|down_7|NZ_CP040443.1_788766_791001_-	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|434aa|down_8|NZ_CP040443.1_791048_792350_-	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|919aa|down_9|NZ_CP040443.1_792406_795163_+	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	4	1094556-1095621	3,3,4	CRT,PILER-CR,CRISPRCasFinder	no	WYL,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-E	CGGTTTATCCCCGCTGGCGCGGGGAACAT,CGGTTTATCCCCGCTGGCGCGGGGAACAT,CGGTTTATCCCCGCTGGCGCGGGGAACAT	29,29,29	0	0	NA	NA	I-E:I-E:I-E	17,16,16	17	TypeI-E	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA|65aa|up_6|NZ_CP040443.1_1088613_1088808_-,NA|66aa|up_5|NZ_CP040443.1_1088758_1088956_-,NA|89aa|up_4|NZ_CP040443.1_1089095_1089362_-,NA|524aa|up_3|NZ_CP040443.1_1089358_1090930_-,NA	NA|293aa|up_9|NZ_CP040443.1_1084434_1085313_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|421aa|up_8|NZ_CP040443.1_1085660_1086923_+	PRK09692, PRK09692, integrase; Provisional	NA|558aa|up_7|NZ_CP040443.1_1087019_1088693_-	COG2194, COG2194, Predicted membrane-associated, metal-dependent hydrolase [General function prediction only]	NA|65aa|up_6|NZ_CP040443.1_1088613_1088808_-	NA	NA|66aa|up_5|NZ_CP040443.1_1088758_1088956_-	NA	NA|89aa|up_4|NZ_CP040443.1_1089095_1089362_-	NA	NA|524aa|up_3|NZ_CP040443.1_1089358_1090930_-	NA	NA|360aa|up_2|NZ_CP040443.1_1090976_1092056_-	PRK13875, PRK13875, conjugal transfer protein TrbL; Provisional	WYL|299aa|up_1|NZ_CP040443.1_1092104_1093001_-	pfam13280, WYL, WYL domain	NA|249aa|up_0|NZ_CP040443.1_1093421_1094168_-	COG3637, COG3637, Opacity protein and related surface antigens [Cell envelope biogenesis, outer membrane]	cas2|98aa|down_0|NZ_CP040443.1_1095717_1096011_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|308aa|down_1|NZ_CP040443.1_1096007_1096931_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|217aa|down_2|NZ_CP040443.1_1096927_1097578_-	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas5|249aa|down_3|NZ_CP040443.1_1097559_1098306_-	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|352aa|down_4|NZ_CP040443.1_1098316_1099372_-	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI	cse2gr11|180aa|down_5|NZ_CP040443.1_1099383_1099923_-	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas8e|521aa|down_6|NZ_CP040443.1_1099919_1101482_-	TIGR02547, CRISPR_system_Cascade_subunit_CasA, CRISPR type I-E/ECOLI-associated protein CasA/Cse1	cas3|886aa|down_7|NZ_CP040443.1_1101579_1104237_-	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	NA|93aa|down_8|NZ_CP040443.1_1104740_1105019_-	pfam06069, PerC, PerC transcriptional activator	NA|213aa|down_9|NZ_CP040443.1_1105088_1105727_-	cd16397, IbrB_like, immunoglobulin-binding regulator IbrB activates eib genes
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	5	3407755-3407894	5	CRISPRCasFinder	no		cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Orphan	CGCCGCATCCGGCACCGTGCTCAGATGCCTGATGCGACACTGG	43	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA|152aa|up_2|NZ_CP040443.1_3405186_3405642_+,NA	NA|270aa|up_9|NZ_CP040443.1_3399143_3399953_-	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|153aa|up_8|NZ_CP040443.1_3400072_3400531_+	PRK00124, PRK00124, YaiI/YqxD family protein	NA|182aa|up_7|NZ_CP040443.1_3400713_3401259_+	PRK03731, aroL, shikimate kinase AroL	NA|64aa|up_6|NZ_CP040443.1_3401287_3401479_+	PRK10380, PRK10380, hypothetical protein; Provisional	NA|226aa|up_5|NZ_CP040443.1_3401732_3402410_+	PRK10481, PRK10481, hypothetical protein; Provisional	NA|95aa|up_4|NZ_CP040443.1_3402481_3402766_+	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase	NA|760aa|up_3|NZ_CP040443.1_3402910_3405190_+	pfam10971, DUF2773, Protein of unknown function (DUF2773)	NA|152aa|up_2|NZ_CP040443.1_3405186_3405642_+	NA	NA|304aa|up_1|NZ_CP040443.1_3405724_3406636_-	PRK00321, rdgC, recombination associated protein; Reviewed	NA|303aa|up_0|NZ_CP040443.1_3406760_3407669_+	PRK09557, PRK09557, fructokinase; Reviewed	NA|379aa|down_0|NZ_CP040443.1_3407989_3409126_-	PRK10091, PRK10091, MFS transport protein AraJ; Provisional	NA|1048aa|down_1|NZ_CP040443.1_3409251_3412395_-	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional	NA|401aa|down_2|NZ_CP040443.1_3412391_3413594_-	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional	NA|230aa|down_3|NZ_CP040443.1_3413783_3414473_+	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB	NA|432aa|down_4|NZ_CP040443.1_3414530_3415826_+	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR	NA|440aa|down_5|NZ_CP040443.1_3416231_3417551_+	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ	NA|458aa|down_6|NZ_CP040443.1_3417626_3419000_+	PRK10580, proY, putative proline-specific permease; Provisional	NA|606aa|down_7|NZ_CP040443.1_3419154_3420972_+	PRK10785, PRK10785, maltodextrin glucosidase; Provisional	NA|194aa|down_8|NZ_CP040443.1_3420976_3421558_-	PRK10045, PRK10045, ACP phosphodiesterase	NA|357aa|down_9|NZ_CP040443.1_3421650_3422721_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	6	3939778-3940405	4,6,4	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	9,10,10	10	TypeI-F	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	NA|551aa|up_9|NZ_CP040443.1_3926188_3927841_-	PRK05290, PRK05290, hybrid cluster protein; Provisional	NA|300aa|up_8|NZ_CP040443.1_3927984_3928884_-	COG2431, COG2431, Predicted membrane protein [Function unknown]	NA|232aa|up_7|NZ_CP040443.1_3929378_3930074_-	PRK05420, PRK05420, aquaporin Z; Provisional	NA|553aa|up_6|NZ_CP040443.1_3930497_3932156_+	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair]	NA|319aa|up_5|NZ_CP040443.1_3932152_3933109_-	COG2990, VirK, Uncharacterized protein conserved in bacteria [Function unknown]	NA|372aa|up_4|NZ_CP040443.1_3933259_3934375_+	PRK11578, PRK11578, macrolide transporter subunit MacA; Provisional	NA|649aa|up_3|NZ_CP040443.1_3934371_3936318_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|75aa|up_2|NZ_CP040443.1_3936390_3936615_-	PRK09937, PRK09937, cold shock-like protein CspD	NA|107aa|up_1|NZ_CP040443.1_3936937_3937258_+	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed	NA|759aa|up_0|NZ_CP040443.1_3937288_3939565_+	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional	cas1|328aa|down_0|NZ_CP040443.1_3940576_3941560_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1078aa|down_1|NZ_CP040443.1_3941556_3944790_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|443aa|down_2|NZ_CP040443.1_3944786_3946115_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|308aa|down_3|NZ_CP040443.1_3946111_3947035_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|334aa|down_4|NZ_CP040443.1_3947045_3948047_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|down_5|NZ_CP040443.1_3948057_3948612_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|183aa|down_6|NZ_CP040443.1_3948992_3949541_+	PRK15220, PRK15220, fimbrial protein YehD	NA|227aa|down_7|NZ_CP040443.1_3949596_3950277_+	PRK15218, PRK15218, fimbrial assembly chaperone	NA|829aa|down_8|NZ_CP040443.1_3950291_3952778_+	PRK15217, PRK15217, fimbrial outer membrane usher protein; Provisional	NA|338aa|down_9|NZ_CP040443.1_3952789_3953803_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]
GCF_005843885.1_ASM584388v1	NZ_CP040443	Escherichia sp. E4742 chromosome, complete genome	7	3954356-3955226	5,7,5	PILER-CR,CRISPRCasFinder,CRT	no	cas1,cas3f,cas8f,cas5f,cas7f,cas6f	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	Type I-F	GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA,GTTCACTGCCGTACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	13,14,14	14	TypeI-F	cas3,csa3,c2c9_V-U4,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,WYL,RT,Cas14u_CAS-V,DEDDh,DinG,cas3f,cas8f,cas5f,cas7f,cas6f	NA,NA	cas1|328aa|up_9|NZ_CP040443.1_3940576_3941560_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|1078aa|up_8|NZ_CP040443.1_3941556_3944790_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas8f|443aa|up_7|NZ_CP040443.1_3944786_3946115_+	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas5f|308aa|up_6|NZ_CP040443.1_3946111_3947035_+	pfam09614, Cas_Csy2, CRISPR-associated protein (Cas_Csy2)	cas7f|334aa|up_5|NZ_CP040443.1_3947045_3948047_+	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas6f|185aa|up_4|NZ_CP040443.1_3948057_3948612_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|183aa|up_3|NZ_CP040443.1_3948992_3949541_+	PRK15220, PRK15220, fimbrial protein YehD	NA|227aa|up_2|NZ_CP040443.1_3949596_3950277_+	PRK15218, PRK15218, fimbrial assembly chaperone	NA|829aa|up_1|NZ_CP040443.1_3950291_3952778_+	PRK15217, PRK15217, fimbrial outer membrane usher protein; Provisional	NA|338aa|up_0|NZ_CP040443.1_3952789_3953803_+	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|73aa|down_0|NZ_CP040443.1_3955337_3955556_-	PRK00276, infA, translation initiation factor IF-1; Validated	NA|235aa|down_1|NZ_CP040443.1_3955840_3956545_-	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed	NA|574aa|down_2|NZ_CP040443.1_3956589_3958311_-	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|589aa|down_3|NZ_CP040443.1_3958311_3960078_-	PRK11174, PRK11174, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed	NA|322aa|down_4|NZ_CP040443.1_3960200_3961166_-	PRK10262, PRK10262, thioredoxin reductase; Provisional	NA|165aa|down_5|NZ_CP040443.1_3961710_3962205_+	PRK11169, PRK11169, leucine-responsive transcriptional regulator Lrp	NA|1314aa|down_6|NZ_CP040443.1_3962339_3966281_+	PRK10263, PRK10263, DNA translocase FtsK; Provisional	NA|204aa|down_7|NZ_CP040443.1_3966439_3967051_+	TIGR00547, Outer-membrane_lipoprotein_carrier_protein, periplasmic chaperone LolA	NA|448aa|down_8|NZ_CP040443.1_3967061_3968405_+	PRK13342, PRK13342, recombination factor protein RarA; Reviewed	NA|431aa|down_9|NZ_CP040443.1_3968495_3969788_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional
