bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2.1|718978|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	1587177	1587207	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CTGTGTTGGGGCCCCGCCAACTTGTATTGCC	1587177-1587207	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	677110	677131	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	677110-677131	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	767946	767967	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	767946-767967	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1552771	1552792	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1552771-1552792	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1866388	1866409	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1866388-1866409	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	102305	102284	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	102284-102305	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	102363	102342	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	102342-102363	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	225497	225476	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	225476-225497	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	553471	553450	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	553450-553471	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1283157	1283136	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1283136-1283157	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1567326	1567305	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1567305-1567326	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.455	22	1	0	1	22	879440	879461	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	879440-879461	CCTGTAGAATTTCTTTTAGAAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.455	22	1	0	1	22	1587032	1587053	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1587032-1587053	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.1|724445|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.455	22	1	0	1	22	1587265	1587286	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1587265-1587286	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	102422	102400	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	102400-102422	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	678304	678282	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	678282-678304	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	1283274	1283252	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1283252-1283274	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	1866446	1866468	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1866446-1866468	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	2198414	2198436	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	2198414-2198436	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	91.304	23	2	0	1	23	1371570	1371592	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1371570-1371592	TCTGTAGAAATTGGGAATACAAT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.2|724503|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	91.304	23	2	0	1	23	1966686	1966708	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1966686-1966708	TCTGTTGAAATTGGGAATCCAAT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	677110	677131	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	677110-677131	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	767946	767967	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	767946-767967	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1552771	1552792	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1552771-1552792	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1866388	1866409	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1866388-1866409	CCTGTAGAATTTCTTTTCGAAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	102305	102284	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	102284-102305	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	102363	102342	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	102342-102363	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	225497	225476	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	225476-225497	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	553471	553450	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	553450-553471	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1283157	1283136	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1283136-1283157	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	22	0	0	1	22	1567326	1567305	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.19e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1567305-1567326	TTTCGAAAAGAAATTCTACAGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.455	22	1	0	1	22	879440	879461	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	879440-879461	CCTGTAGAATTTCTTTTAGAAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.455	22	1	0	1	22	1587032	1587053	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1587032-1587053	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.3|724562|22|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.455	22	1	0	1	22	1587265	1587286	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1587265-1587286	CCTGTAGAATTTCTTTACGAAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	102422	102400	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	102400-102422	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	678304	678282	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	678282-678304	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	1283274	1283252	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1283252-1283274	ATTGGATTCCCAATTTCTACAGA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	1866446	1866468	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1866446-1866468	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	95.652	23	1	0	1	23	2198414	2198436	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.56e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	2198414-2198436	TCTGTAGAAATTGGGAATCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	91.304	23	2	0	1	23	1371570	1371592	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1371570-1371592	TCTGTAGAAATTGGGAATACAAT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	3.4|724620|23|NZ_CP039162|CRT	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	91.304	23	2	0	1	23	1966686	1966708	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1966686-1966708	TCTGTTGAAATTGGGAATCCAAT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	32	0	0	1	32	3655	3686	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.01e-09	52.3	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	3655-3686	AACTTGCACATTATTGTAAGCTGACTTTCCGC	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	32	0	0	1	32	768203	768234	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.01e-09	52.3	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	768203-768234	AACTTGCACATTATTGTAAGCTGACTTTCCGC	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	32	0	0	1	32	1567395	1567364	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.01e-09	52.3	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	1567364-1567395	GCGGAAAGTCAGCTTACAATAATGTGCAAGTT	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	32	0	0	1	32	1990713	1990682	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.01e-09	52.3	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	1990682-1990713	GCGGAAAGTCAGCTTACAATAATGTGCAAGTT	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	32	0	0	1	32	2377225	2377256	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.01e-09	52.3	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	2377225-2377256	AACTTGCACATTATTGTAAGCTGACTTTCCGC	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	96.875	32	1	0	1	32	1283341	1283310	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	2.71e-08	49.1	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	1283310-1283341	GCGGAAAGTCAGTTTACAATAATGTGCAAGTT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	4.1|731747|32|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.750	32	2	0	1	32	1072739	1072708	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	2.44e-07	46.0	1.0	AACTTGCACATTATTGTAAGCTGACTTTCCGC	1072708-1072739	GCGCAAAGTCAGCTTACAAAAATGTGCAAGTT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	5.1|767897|34|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	97.059	34	1	0	1	34	1283265	1283232	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	4.02e-09	52.3	1.0	ATTGAGAATCCAATTTCTCTTTGTTGGGGCCCAT	1283232-1283265	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	6.1|1552721|33|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	96.970	33	1	0	1	33	102413	102381	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.05e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	102381-102413	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	6.1|1552721|33|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	96.970	33	1	0	1	33	1283265	1283233	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	1.05e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	1283233-1283265	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	7.1|1966629|34|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	34	0	0	1	34	718953	718986	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	4.46e-10	55.5	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	718953-718986	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	7.1|1966629|34|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	100.000	34	0	0	1	34	1072444	1072411	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	4.46e-10	55.5	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1072411-1072444	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	7.1|1966629|34|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	97.059	34	1	0	1	34	1672737	1672704	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	4.02e-09	52.3	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1672704-1672737	CCAACACAAAGAATTTCGAAAAGAAATTCTACAA	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	7.1|1966629|34|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	94.118	34	2	0	1	34	1287606	1287639	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.62e-08	49.1	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1287606-1287639	TTGTGGAATTTCTTATCGAAATTCTCTGTGTTGG	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	7.1|1966629|34|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	94.118	34	2	0	1	34	2652864	2652897	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	3.62e-08	49.1	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	2652864-2652897	TTGTAGAATTTCTTTTCGAAATTCTTTTTGTTGG	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	96.774	31	1	0	1	31	731697	731727	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	8.14e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	731697-731727	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	3661	3691	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	3661-3691	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	768209	768239	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	768209-768239	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	975439	975469	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	975439-975469	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	1371623	1371653	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1371623-1371653	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	2198467	2198497	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2198467-2198497	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	2377231	2377261	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2377231-2377261	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	301804	301774	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	301774-301804	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	553535	553505	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	553505-553535	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	1076851	1076821	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1076821-1076851	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	1283221	1283191	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1283191-1283221	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	10.1|2209268|31|NZ_CP039162|CRISPRCasFinder	NZ_CP039162.1	Staphylococcus aureus strain Lr12 chromosome, complete genome	93.548	31	2	0	1	31	1567389	1567359	340512-340613|718954-719032|724409-724678|731723-731802|767873-767954|1552695-1552779|1966605-1966686|2092306-2092386|2104627-2104712|2209243-2209323	7.32e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1567359-1567389	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
