The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	656188	664009	2769144		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|656188_657244_-	HAMP domain-containing histidine kinase	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|657243_657930_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|657904_658378_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|658720_659161_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|659440_660025_-	hypothetical protein	NA	NA	NA	NA	NA
WP_103152307.1|660123_660837_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.1	4.2e-51
WP_000941336.1|660840_661260_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|661261_661930_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|662280_662874_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_103152308.1|662857_664009_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.0	4.6e-23
>prophage 2
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	675980	690565	2769144		uncultured_Caudovirales_phage(50.0%)	17	NA	NA
WP_000663030.1|675980_677039_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197262.1|677377_677920_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_025174185.1|678306_678474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000429006.1|678742_679660_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031760357.1|679750_679852_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|679929_681435_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_001788366.1|681500_681746_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000930014.1|681775_682276_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|682295_683162_-	DMT family transporter	NA	NA	NA	NA	NA
WP_001790091.1|683546_683813_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000692521.1|683962_684361_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|684323_686429_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|686546_687518_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|687698_687854_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|687892_688864_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|688850_689807_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|689803_690565_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 3
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	776284	821970	2769144	terminase,holin,integrase,capsid,plate,head,portal,tail	Staphylococcus_phage(61.19%)	69	771591:771606	828792:828807
771591:771606	attL	AAAGAATTACCAAAAG	NA	NA	NA	NA
WP_103152250.1|776284_777526_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	6.3e-111
WP_001010508.1|777515_777980_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074405.1|778130_779528_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_015984510.1|779595_780645_-|integrase	site-specific integrase	integrase	A1KX52	Staphylococcus_virus	100.0	2.0e-203
WP_000143212.1|780756_780957_+	excisionase	NA	Q38044	Staphylococcus_phage	100.0	5.6e-30
WP_000391592.1|780893_781799_-	hypothetical protein	NA	A0A0F6N3N6	Staphylococcus_phage	100.0	1.4e-168
WP_000092506.1|781830_782295_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0H4J322	Staphylococcus_phage	94.8	1.5e-78
WP_000064542.1|782316_782646_-	helix-turn-helix transcriptional regulator	NA	A0A0H4ITV7	Staphylococcus_phage	99.1	7.1e-54
WP_001045396.1|782822_783071_+	helix-turn-helix transcriptional regulator	NA	A0A0H4IPU8	Staphylococcus_phage	95.1	7.7e-37
WP_000435350.1|783082_783529_+	hypothetical protein	NA	A0A1W6JPI3	Staphylococcus_phage	98.6	3.6e-77
WP_000933364.1|784296_784482_+	helix-turn-helix transcriptional regulator	NA	A0A0H4IP57	Staphylococcus_phage	98.4	1.7e-25
WP_017804778.1|784483_785233_+	oxidoreductase	NA	A0A1X9H0A0	Staphylococcus_phage	92.8	1.6e-125
WP_017431792.1|785248_785464_+	hypothetical protein	NA	E9LT76	Staphylococcus_phage	97.2	4.2e-31
WP_000122246.1|785419_785665_-	hypothetical protein	NA	E9LT77	Staphylococcus_phage	100.0	6.9e-38
WP_000977378.1|785735_785957_+	hypothetical protein	NA	E0Y3P2	Staphylococcus_virus	100.0	1.5e-31
WP_000066017.1|785949_786111_+	DUF1270 domain-containing protein	NA	D2JGJ6	Staphylococcus_phage	100.0	4.3e-20
WP_000291090.1|786202_786463_+	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_000815401.1|786472_786694_+	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000139720.1|786686_787310_+	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000934385.1|787309_787738_+	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
WP_001124439.1|787751_788426_+	hypothetical protein	NA	R4IH15	Staphylococcus_phage	97.3	3.8e-126
WP_000414755.1|788564_788846_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000190253.1|788911_789682_+	hypothetical protein	NA	A0A1W6JQ00	Staphylococcus_phage	100.0	6.4e-122
WP_000803062.1|789691_790471_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000256589.1|790464_790623_+	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_015984512.1|790635_790857_+	DUF3269 family protein	NA	A1KX75	Staphylococcus_virus	100.0	2.2e-35
WP_000049794.1|790866_791271_+	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
WP_001187243.1|791275_791461_+	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000101252.1|791461_791767_+	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_000029376.1|791894_792251_+	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_015984514.1|792254_792497_+	hypothetical protein	NA	A1KX80	Staphylococcus_virus	100.0	1.1e-40
WP_000982708.1|792561_793011_+	hypothetical protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
WP_103252635.1|793007_793373_+	acetyltransferase	NA	A1KX82	Staphylococcus_virus	91.7	5.8e-57
WP_017804684.1|793365_793620_+	DUF1024 family protein	NA	A1KX83	Staphylococcus_virus	100.0	1.4e-38
WP_072466723.1|793582_793777_+	hypothetical protein	NA	A1KX84	Staphylococcus_virus	98.4	1.6e-26
WP_015984517.1|793769_794306_+	hypothetical protein	NA	A1KX85	Staphylococcus_virus	100.0	4.6e-95
WP_015984518.1|794342_794537_+	DUF1381 domain-containing protein	NA	A1KX86	Staphylococcus_virus	100.0	7.4e-27
WP_015984519.1|794536_795061_+	hypothetical protein	NA	A1KX87	Staphylococcus_virus	100.0	9.2e-80
WP_000595258.1|795107_795281_+	transcriptional activator RinB	NA	A1KX88	Staphylococcus_virus	100.0	3.7e-22
WP_000990005.1|795281_795428_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	2.2e-15
WP_000162701.1|795451_795874_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_000594088.1|796204_796699_+|terminase	terminase	terminase	A0A0N9BAX3	Staphylococcus_phage	100.0	3.4e-84
WP_001037578.1|796691_797915_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0N9BAX9	Staphylococcus_phage	100.0	7.5e-242
WP_000177422.1|797911_799336_+|portal	phage portal protein	portal	Q4ZBZ7	Staphylococcus_virus	100.0	6.2e-272
WP_138118331.1|799304_800258_+|head	phage head morphogenesis protein	head	A1KX94	Staphylococcus_virus	99.7	5.1e-177
WP_000346032.1|800259_800466_+	hypothetical protein	NA	A0A2H4JAK3	uncultured_Caudovirales_phage	100.0	1.4e-28
WP_001019221.1|800568_801153_+	DUF4355 domain-containing protein	NA	A0A2H4JDY6	uncultured_Caudovirales_phage	100.0	7.3e-78
WP_000235168.1|801169_802084_+|capsid	phage major capsid protein	capsid	A0A0H3U2U7	Staphylococcus_phage	100.0	1.2e-170
WP_000177351.1|802244_802595_+|head,tail	phage head-tail adapter protein	head,tail	A0A0H3U2R5	Staphylococcus_phage	100.0	1.9e-60
WP_000483040.1|802606_802942_+|head	phage head closure protein	head	Q4ZBR2	Staphylococcus_phage	100.0	8.8e-60
WP_001151330.1|802928_803342_+	HK97 gp10 family phage protein	NA	A0A0N9BAY5	Staphylococcus_phage	100.0	1.1e-75
WP_000270192.1|803354_803780_+	DUF3168 domain-containing protein	NA	Q4ZBQ9	Staphylococcus_phage	100.0	5.5e-75
WP_000057582.1|803780_804338_+|tail	tail protein	tail	Q4ZBQ8	Staphylococcus_phage	100.0	8.2e-103
WP_000134337.1|804404_804911_+	hypothetical protein	NA	Q4ZBQ7	Staphylococcus_phage	100.0	2.7e-92
WP_000880587.1|804955_805240_+	hypothetical protein	NA	A0A0N7E0V9	Staphylococcus_phage	100.0	8.8e-45
WP_061389145.1|805243_808129_+|terminase	terminase	terminase	A0A2H4JGV1	uncultured_Caudovirales_phage	99.3	0.0e+00
WP_000560181.1|808143_809085_+|tail	phage tail protein	tail	Q4ZBQ4	Staphylococcus_phage	100.0	5.2e-182
WP_015984523.1|809095_810982_+	hypothetical protein	NA	A1KXA8	Staphylococcus_virus	100.0	0.0e+00
WP_015984524.1|810994_812893_+	hypothetical protein	NA	A0A2H4JCV8	uncultured_Caudovirales_phage	100.0	0.0e+00
WP_015984525.1|812892_814716_+|plate	phage baseplate upper protein	plate	A1KXB0	Staphylococcus_virus	100.0	0.0e+00
WP_000705896.1|814715_815093_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|815096_815270_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466777.1|815309_815609_+	DUF2951 domain-containing protein	NA	A0A0F6N3M6	Staphylococcus_phage	100.0	9.9e-47
WP_064428645.1|815745_817620_+	CHAP domain-containing protein	NA	A1KXB4	Staphylococcus_virus	99.8	0.0e+00
WP_015984527.1|817632_818871_+|plate	BppU family phage baseplate upper protein	plate	A1KXB5	Staphylococcus_virus	100.0	5.9e-210
WP_000398868.1|818876_819272_+	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
WP_000351119.1|819327_819603_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_015984528.1|819589_821002_+	CHAP domain-containing protein	NA	A1KXB8	Staphylococcus_virus	100.0	1.2e-286
WP_001065781.1|821127_821970_+	exfoliative toxin A	NA	A0A0E3T8P7	Staphylococcus_phage	100.0	2.3e-157
828792:828807	attR	AAAGAATTACCAAAAG	NA	NA	NA	NA
>prophage 4
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	976949	985404	2769144		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861572.1|976949_977432_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
WP_001010413.1|977418_978543_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|978546_979251_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|979250_979514_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|979515_980187_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_103152240.1|980179_982369_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.7	2.3e-140
WP_000483720.1|982347_983832_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_138118337.1|983824_984835_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	40.2	4.3e-57
WP_000238669.1|984837_985404_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	1602364	1611395	2769144	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1602364_1602883_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|1602904_1605178_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|1605368_1607648_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1607922_1608183_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1608201_1609341_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1609363_1610389_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1610390_1611395_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 6
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	1725421	1794583	2769144	protease,tRNA	Staphylococcus_phage(95.56%)	66	NA	NA
WP_001266162.1|1725421_1726066_-|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_000434765.1|1726080_1726872_-	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_000411084.1|1727421_1728270_-	D-amino-acid transaminase	NA	NA	NA	NA	NA
WP_000265417.1|1728273_1729683_-	Mn(2+)-dependent dipeptidase Sapep	NA	NA	NA	NA	NA
WP_001051856.1|1730240_1730663_-	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_001217125.1|1730679_1731375_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000004336.1|1731371_1733033_-	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_000285020.1|1733439_1734708_+	NAD(P)/FAD-dependent oxidoreductase	NA	A0A2H4PQX1	Staphylococcus_phage	99.1	9.1e-57
WP_138118349.1|1734824_1740923_-	DUF1542 domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	79.2	4.6e-255
WP_000836461.1|1741248_1741560_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001557386.1|1741581_1743999_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|1744286_1745468_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|1745577_1746531_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1746527_1747091_+	methyltransferase domain-containing protein	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1747213_1747615_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_138118350.1|1748186_1749014_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1749016_1749136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|1749247_1750249_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|1750370_1750835_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|1750847_1752029_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|1752039_1752672_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_103152295.1|1752678_1753710_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	5.3e-196
WP_001261668.1|1754202_1755705_-	FAD-dependent oxidoreductase	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1756227_1756542_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|1756541_1757834_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_138118351.1|1757920_1758775_-	autolysin	NA	Q4ZCC7	Staphylococcus_virus	38.1	3.7e-38
WP_000384171.1|1759050_1759275_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1759473_1759944_+	RNA polymerase sigma factor	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1760056_1760500_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1760486_1760930_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|1761225_1761861_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1762300_1763014_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1763273_1763576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1763831_1764197_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|1764193_1764547_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|1766543_1767377_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|1767588_1768497_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|1768618_1769815_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|1770186_1771779_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|1772156_1772903_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|1772907_1773381_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1773446_1773704_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|1773700_1774702_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|1774706_1776185_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|1776343_1776799_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|1777101_1777752_+	calcium-binding protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|1777832_1778828_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|1778902_1779529_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|1779569_1779911_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|1780011_1780584_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|1781938_1782034_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1782156_1782258_+	hypothetical protein	NA	NA	NA	NA	NA
WP_069479482.1|1784286_1784421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038752.1|1784483_1785203_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
WP_011447030.1|1785304_1785412_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001038704.1|1785360_1786080_-|protease	serine protease SplD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
WP_001038872.1|1786200_1786920_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|1786977_1787700_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_103152317.1|1787824_1788532_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	96.6	3.0e-126
WP_001792819.1|1788967_1789186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001092780.1|1789495_1790077_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000469591.1|1790549_1790768_-	hypothetical protein	NA	A0A2H4PQH0	Staphylococcus_phage	80.6	2.0e-25
WP_000550252.1|1791023_1791497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|1791501_1792293_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|1792662_1793646_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_103152316.1|1793647_1794583_-	beta-channel forming cytolysin	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	3.9e-174
>prophage 7
NZ_CP039162	Staphylococcus aureus strain Lr12 chromosome, complete genome	2769144	1890419	1971569	2769144	terminase,holin,integrase,capsid,head,tail,protease,portal	Staphylococcus_phage(88.16%)	108	1960188:1960204	1977886:1977902
WP_000827746.1|1890419_1891586_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|1891616_1891943_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|1892234_1892408_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|1892388_1892991_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|1893261_1894083_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|1894075_1895545_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|1895728_1896805_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|1896824_1897619_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|1897690_1897798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|1897808_1899371_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|1899575_1900673_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|1901041_1901602_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|1901654_1902584_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|1902776_1902950_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021210.1|1903001_1904381_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|1904500_1905529_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|1905798_1906200_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|1906772_1906946_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|1907396_1908437_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|1908493_1909336_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|1909332_1909890_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|1909949_1910474_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|1910594_1911158_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|1911223_1911964_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|1911963_1912836_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|1912832_1913513_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|1913513_1914410_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|1914406_1914787_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|1915044_1915221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|1915463_1915562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068542.1|1915762_1917049_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_001797815.1|1917327_1917648_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|1917632_1919063_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_000669791.1|1920020_1920200_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	98.3	1.4e-24
WP_001789576.1|1920223_1920532_+	hypothetical protein	NA	M9NTD8	Staphylococcus_phage	100.0	3.2e-40
WP_001791826.1|1920510_1920771_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|1920823_1921174_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_001110820.1|1921684_1921981_-	peptidoglycan hydrolase	NA	A0A1P8L6B4	Staphylococcus_phage	95.9	1.6e-49
WP_001791825.1|1921887_1922142_-	hypothetical protein	NA	Q4ZCK0	Staphylococcus_virus	93.0	8.0e-13
WP_001793418.1|1922068_1922224_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000920038.1|1922670_1923162_-	staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
WP_000861038.1|1923352_1924108_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|1924119_1924374_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|1924425_1924533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072353918.1|1924585_1924762_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	94.8	5.5e-21
WP_000340977.1|1924904_1925279_-	hypothetical protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
WP_001262620.1|1925334_1925622_-	hypothetical protein	NA	C5I682	Staphylococcus_phage	100.0	9.9e-44
WP_001000058.1|1925667_1925820_-	hypothetical protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
WP_000582128.1|1925812_1929595_-	hypothetical protein	NA	A0A1V0E5H3	Staphylococcus_phage	99.8	0.0e+00
WP_001154317.1|1929610_1931101_-|tail	phage tail protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
WP_001133535.1|1931100_1935783_-|tail	phage tail tape measure protein	tail	Q8SDK4	Staphylococcus_phage	90.8	0.0e+00
WP_000571956.1|1935838_1935961_-	hypothetical protein	NA	D2JLF6	Staphylococcus_phage	97.5	2.6e-14
WP_000442601.1|1936020_1936467_-	hypothetical protein	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
WP_000570652.1|1936531_1937485_-|tail	phage tail protein	tail	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
WP_000611449.1|1937485_1937866_-	hypothetical protein	NA	D2JLF3	Staphylococcus_phage	99.2	1.3e-67
WP_000501244.1|1937862_1938240_-	HK97 gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
WP_000975314.1|1938239_1938575_-|head,tail	head-tail adaptor protein	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
WP_001177489.1|1938561_1938894_-|head,tail	phage head-tail adapter protein	head,tail	D2JLF0	Staphylococcus_phage	99.1	8.2e-58
WP_001252099.1|1938902_1939061_-	hypothetical protein	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
WP_138118353.1|1939096_1940344_-|capsid	phage major capsid protein	capsid	Q8SDK8	Staphylococcus_phage	97.6	3.5e-210
WP_000032523.1|1940431_1941016_-|head,protease	HK97 family phage prohead protease	head,protease	D2JLE7	Staphylococcus_phage	99.5	2.9e-106
WP_077477357.1|1941008_1942199_-|portal	phage portal protein	portal	D2JLE6	Staphylococcus_phage	99.2	2.6e-223
WP_000644967.1|1942264_1942504_-	hypothetical protein	NA	A7TWC1	Staphylococcus_phage	98.7	2.0e-34
WP_000133309.1|1942478_1944173_-|terminase	terminase	terminase	D2JLE4	Staphylococcus_phage	99.8	0.0e+00
WP_000919028.1|1944172_1944643_-|terminase	phage terminase small subunit P27 family	terminase	D2JLE3	Staphylococcus_phage	100.0	3.3e-81
WP_016169209.1|1944771_1945116_-	HNH endonuclease	NA	D2JLE2	Staphylococcus_phage	98.2	2.7e-64
WP_000406193.1|1945131_1945584_-	nucleoside triphosphate pyrophosphohydrolase family protein	NA	D2JLE1	Staphylococcus_phage	99.3	3.9e-79
WP_000282752.1|1945697_1946159_-	hypothetical protein	NA	D2JLE0	Staphylococcus_phage	100.0	1.1e-68
WP_001797982.1|1946065_1946278_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001813913.1|1946181_1946382_-	DUF1514 family protein	NA	R9QT57	Staphylococcus_phage	98.5	1.5e-27
WP_000501855.1|1946381_1946546_-	transcriptional activator RinB	NA	A0A2I6PDY4	Staphylococcus_phage	98.1	5.1e-21
WP_001125015.1|1946533_1946734_-	hypothetical protein	NA	A0A2I6PF22	Staphylococcus_phage	100.0	1.8e-28
WP_000195782.1|1946708_1946897_-	DUF1381 domain-containing protein	NA	A0A2I6PDV0	Staphylococcus_phage	100.0	2.1e-26
WP_001282074.1|1946893_1947139_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	100.0	5.0e-36
WP_001066447.1|1947175_1947712_-	hypothetical protein	NA	A0A0H3U2Z8	Staphylococcus_phage	100.0	7.2e-96
WP_001065097.1|1947861_1948116_-	DUF1024 family protein	NA	A0A0H3U469	Staphylococcus_phage	100.0	5.0e-39
WP_000131370.1|1948130_1948373_-	hypothetical protein	NA	Q4ZDP7	Staphylococcus_virus	95.0	2.1e-39
WP_000101288.1|1948376_1948745_-	hypothetical protein	NA	A0A0H3U2T3	Staphylococcus_phage	100.0	2.0e-49
WP_078065130.1|1948757_1949066_-	RusA family crossover junction endodeoxyribonuclease	NA	A0EWX6	Staphylococcus_phage	100.0	1.6e-52
WP_000338530.1|1949168_1949387_-	hypothetical protein	NA	A0A2I6PDG4	Staphylococcus_phage	100.0	1.0e-37
WP_049294669.1|1949393_1950287_-	DnaD domain-containing protein	NA	A0A2I6PDG7	Staphylococcus_phage	99.7	1.9e-141
WP_000934769.1|1950316_1950787_-	single-stranded DNA-binding protein	NA	A0A0E3T9H6	Staphylococcus_phage	100.0	5.7e-81
WP_071621397.1|1950787_1951405_-	MBL fold metallo-hydrolase	NA	S4SWA4	Staphylococcus_phage	100.0	9.1e-87
WP_000138481.1|1951485_1952406_-	recombinase	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
WP_024936919.1|1952407_1954351_-	AAA family ATPase	NA	R9QT82	Staphylococcus_phage	99.8	0.0e+00
WP_001205732.1|1954359_1954623_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291488.1|1954631_1954892_-	DUF1108 family protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
WP_000066020.1|1954984_1955146_-	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_001120935.1|1955142_1955463_-	DUF771 domain-containing protein	NA	Q4ZDR7	Staphylococcus_virus	100.0	1.5e-56
WP_000801108.1|1955521_1955749_+	hypothetical protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
WP_000389906.1|1955750_1955942_-	hypothetical protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
WP_000768245.1|1955991_1956348_+	DUF2513 domain-containing protein	NA	A0A1P8L6H1	Staphylococcus_phage	100.0	6.1e-59
WP_001148859.1|1956342_1956537_-	hypothetical protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
WP_001148565.1|1956552_1957341_-	phage antirepressor KilAC domain-containing protein	NA	R9QSV3	Staphylococcus_phage	100.0	1.2e-144
WP_000639922.1|1957356_1957599_-	DUF739 family protein	NA	R9QSU1	Staphylococcus_phage	100.0	9.5e-40
WP_001083967.1|1957762_1958479_+	helix-turn-helix domain-containing protein	NA	R9QTP6	Staphylococcus_phage	100.0	9.2e-131
WP_000804508.1|1958490_1959348_+	restriction endonuclease	NA	R9QTP0	Staphylococcus_phage	100.0	1.2e-161
WP_000705243.1|1959392_1959575_+	hypothetical protein	NA	R9QT81	Staphylococcus_phage	100.0	5.3e-27
WP_001013104.1|1959610_1959757_+	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000191459.1|1959753_1960368_-	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
1960188:1960204	attL	CATTATTAAAAATTATA	NA	NA	NA	NA
WP_000857176.1|1960475_1961513_+|integrase	site-specific integrase	integrase	A7TWL3	Staphylococcus_phage	100.0	3.4e-179
WP_000595392.1|1962631_1963648_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|1963669_1964725_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_103152253.1|1965160_1966384_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|1966827_1968135_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|1968674_1970291_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|1970366_1970651_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197635.1|1970825_1971569_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
1977886:1977902	attR	CATTATTAAAAATTATA	NA	NA	NA	NA
