assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	1	342701-342801	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TTATGAATTGAGTATTAAATTTG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|70aa|up_9|NZ_CP039157.1_334272_334482_-,NA|128aa|up_7|NZ_CP039157.1_335306_335690_-,NA|98aa|up_5|NZ_CP039157.1_336643_336937_-,NA|34aa|up_1|NZ_CP039157.1_341925_342027_+,NA|86aa|up_0|NZ_CP039157.1_342234_342492_-,NA|221aa|down_1|NZ_CP039157.1_343891_344554_-,NA|169aa|down_7|NZ_CP039157.1_350937_351444_-	NA|70aa|up_9|NZ_CP039157.1_334272_334482_-	NA	NA|194aa|up_8|NZ_CP039157.1_334659_335241_+	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only]	NA|128aa|up_7|NZ_CP039157.1_335306_335690_-	NA	NA|209aa|up_6|NZ_CP039157.1_335944_336571_-	NF033193, lipo_NDxxF, NDxxF motif lipoprotein	NA|98aa|up_5|NZ_CP039157.1_336643_336937_-	NA	NA|508aa|up_4|NZ_CP039157.1_337015_338539_-	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional	NA|190aa|up_3|NZ_CP039157.1_338554_339124_-	TIGR03137, AhpC, peroxiredoxin	NA|463aa|up_2|NZ_CP039157.1_340452_341841_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|34aa|up_1|NZ_CP039157.1_341925_342027_+	NA	NA|86aa|up_0|NZ_CP039157.1_342234_342492_-	NA	NA|319aa|down_0|NZ_CP039157.1_342817_343774_-	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional	NA|221aa|down_1|NZ_CP039157.1_343891_344554_-	NA	NA|136aa|down_2|NZ_CP039157.1_344696_345104_-	pfam11181, YflT, Heat induced stress protein YflT	NA|193aa|down_3|NZ_CP039157.1_345616_346195_+	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated	NA|423aa|down_4|NZ_CP039157.1_346194_347463_+	TIGR03173, pbuX, xanthine permease	NA|489aa|down_5|NZ_CP039157.1_347500_348967_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|514aa|down_6|NZ_CP039157.1_348991_350533_+	PRK00074, guaA, GMP synthase; Reviewed	NA|169aa|down_7|NZ_CP039157.1_350937_351444_-	NA	NA|235aa|down_8|NZ_CP039157.1_351836_352541_-	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|91aa|down_9|NZ_CP039157.1_352939_353212_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	2	565235-565327	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CTAAAGGTGAAGAGGAACGCAGTTGGATGCTA	32	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|36aa|up_4|NZ_CP039157.1_561718_561826_+,NA|117aa|up_1|NZ_CP039157.1_563937_564288_-,NA|169aa|down_4|NZ_CP039157.1_569074_569581_+,NA|239aa|down_5|NZ_CP039157.1_569742_570459_+	NA|179aa|up_9|NZ_CP039157.1_557069_557606_+	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|159aa|up_8|NZ_CP039157.1_557774_558251_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|432aa|up_7|NZ_CP039157.1_558290_559586_+	COG1078, COG1078, HD superfamily phosphohydrolases [General function prediction only]	NA|174aa|up_6|NZ_CP039157.1_559613_560135_+	pfam08741, YwhD, YwhD family	NA|337aa|up_5|NZ_CP039157.1_560633_561644_+	PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional	NA|36aa|up_4|NZ_CP039157.1_561718_561826_+	NA	NA|128aa|up_3|NZ_CP039157.1_561951_562335_+	COG4506, COG4506, Uncharacterized protein conserved in bacteria [Function unknown]	NA|554aa|up_2|NZ_CP039157.1_562331_563993_+	PRK01611, argS, arginyl-tRNA synthetase; Reviewed	NA|117aa|up_1|NZ_CP039157.1_563937_564288_-	NA	NA|212aa|up_0|NZ_CP039157.1_564381_565017_+	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|276aa|down_0|NZ_CP039157.1_565455_566283_+	cd01143, YvrC, Periplasmic binding protein YvrC	NA|317aa|down_1|NZ_CP039157.1_566430_567381_+	pfam01032, FecCD, FecCD transport family	NA|240aa|down_2|NZ_CP039157.1_567435_568155_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|267aa|down_3|NZ_CP039157.1_568138_568939_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|169aa|down_4|NZ_CP039157.1_569074_569581_+	NA	NA|239aa|down_5|NZ_CP039157.1_569742_570459_+	NA	NA|263aa|down_6|NZ_CP039157.1_570627_571416_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|125aa|down_7|NZ_CP039157.1_571666_572041_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|310aa|down_8|NZ_CP039157.1_572988_573918_-	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown]	NA|75aa|down_9|NZ_CP039157.1_574112_574337_-	pfam11148, DUF2922, Protein of unknown function (DUF2922)
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	3	628349-628447	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAGAGCCCCTAATTAATAAATTAAAAGGGG	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|390aa|up_6|NZ_CP039157.1_623231_624401_+,NA|39aa|up_2|NZ_CP039157.1_626376_626493_+,NA|230aa|down_2|NZ_CP039157.1_630268_630958_-,NA|100aa|down_5|NZ_CP039157.1_632127_632427_+	NA|336aa|up_9|NZ_CP039157.1_617894_618902_+	pfam01384, PHO4, Phosphate transporter family	NA|266aa|up_8|NZ_CP039157.1_619489_620287_-	COG3942, COG3942, Surface antigen [General function prediction only]	NA|215aa|up_7|NZ_CP039157.1_620647_621292_+	COG0670, COG0670, Integral membrane protein, interacts with FtsH [General function prediction only]	NA|390aa|up_6|NZ_CP039157.1_623231_624401_+	NA	NA|120aa|up_5|NZ_CP039157.1_624546_624906_+	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|239aa|up_4|NZ_CP039157.1_625095_625812_+	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator	NA|158aa|up_3|NZ_CP039157.1_625811_626285_+	COG3542, COG3542, Uncharacterized conserved protein [Function unknown]	NA|39aa|up_2|NZ_CP039157.1_626376_626493_+	NA	NA|215aa|up_1|NZ_CP039157.1_626637_627282_+	COG2306, COG2306, Predicted RNA-binding protein, associated with RNAses E/G family [General function prediction only]	NA|289aa|up_0|NZ_CP039157.1_627397_628264_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|407aa|down_0|NZ_CP039157.1_628464_629685_+	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters	NA|163aa|down_1|NZ_CP039157.1_629681_630170_+	COG2839, COG2839, Uncharacterized protein conserved in bacteria [Function unknown]	NA|230aa|down_2|NZ_CP039157.1_630268_630958_-	NA	NA|148aa|down_3|NZ_CP039157.1_631084_631528_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|132aa|down_4|NZ_CP039157.1_631594_631990_+	PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional	NA|100aa|down_5|NZ_CP039157.1_632127_632427_+	NA	NA|181aa|down_6|NZ_CP039157.1_632506_633049_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|189aa|down_7|NZ_CP039157.1_633144_633711_-	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only]	NA|153aa|down_8|NZ_CP039157.1_633712_634171_-	PRK00124, PRK00124, YaiI/YqxD family protein	NA|228aa|down_9|NZ_CP039157.1_634173_634857_-	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	4	694904-694986	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCAATTTCTACAGACAATGCAAGTTGG	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|69aa|up_9|NZ_CP039157.1_681504_681711_+,NA|34aa|down_1|NZ_CP039157.1_696442_696544_+,NA|82aa|down_3|NZ_CP039157.1_698192_698438_-,NA|89aa|down_6|NZ_CP039157.1_700238_700505_+	NA|69aa|up_9|NZ_CP039157.1_681504_681711_+	NA	NA|237aa|up_8|NZ_CP039157.1_681798_682509_+	COG2049, DUR1, Allophanate hydrolase subunit 1 [Amino acid transport and metabolism]	NA|335aa|up_7|NZ_CP039157.1_682492_683497_+	COG1984, DUR1, Allophanate hydrolase subunit 2 [Amino acid transport and metabolism]	NA|647aa|up_6|NZ_CP039157.1_683970_685911_+	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane]	NA|628aa|up_5|NZ_CP039157.1_686181_688065_+	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]	NA|594aa|up_4|NZ_CP039157.1_688076_689858_+	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|326aa|up_3|NZ_CP039157.1_690079_691057_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|505aa|up_2|NZ_CP039157.1_691049_692564_+	cd13610, PBP2_ChoS, Substrate-binding domain ChoS of an osmoregulated ABC-type transporter and related proteins; type 2 periplasmic-binding protein fold	NA|353aa|up_1|NZ_CP039157.1_692803_693862_+	PRK03158, PRK03158, histidinol-phosphate aminotransferase; Provisional	NA|181aa|up_0|NZ_CP039157.1_694212_694755_+	COG4502, COG4502, 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]	NA|306aa|down_0|NZ_CP039157.1_695434_696352_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|34aa|down_1|NZ_CP039157.1_696442_696544_+	NA	NA|502aa|down_2|NZ_CP039157.1_696621_698127_-	COG3104, PTR2, Dipeptide/tripeptide permease [Amino acid transport and metabolism]	NA|82aa|down_3|NZ_CP039157.1_698192_698438_-	NA	NA|167aa|down_4|NZ_CP039157.1_698467_698968_-	COG0780, COG0780, Enzyme related to GTP cyclohydrolase I [General function prediction only]	NA|289aa|down_5|NZ_CP039157.1_698987_699854_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|89aa|down_6|NZ_CP039157.1_700238_700505_+	NA	NA|133aa|down_7|NZ_CP039157.1_700654_701053_+	COG1780, NrdI, Protein involved in ribonucleotide reduction [Nucleotide transport and metabolism]	NA|702aa|down_8|NZ_CP039157.1_701015_703121_+	PRK07632, PRK07632, ribonucleotide-diphosphate reductase subunit alpha; Validated	NA|324aa|down_9|NZ_CP039157.1_703238_704210_+	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	5	735785-735865	5	CRISPRCasFinder	no	cas3	cas3,DEDDh,DinG,csa3,WYL	Unclear	TTCTTTATGTTGGGGCCCCGCCAACT	26	1	8	735811-735839|735811-735839|735811-735839|735811-735839|735811-735839|735811-735839|735811-735839|735811-735839	NZ_CP039157.1_2749266-2749294|NZ_CP039157.1_303933-303905|NZ_CP039157.1_303988-303960|NZ_CP039157.1_1800257-1800229|NZ_CP039157.1_792517-792545|NZ_CP039157.1_869498-869526|NZ_CP039157.1_1979513-1979541|NZ_CP039157.1_1111055-1111027	NA	1	1	Unclear	cas3,DEDDh,DinG,csa3,WYL	NA|35aa|up_7|NZ_CP039157.1_726698_726803_+,NA|36aa|up_5|NZ_CP039157.1_728235_728343_+,NA	NA|191aa|up_9|NZ_CP039157.1_723139_723712_+	COG1544, COG1544, Ribosome-associated protein Y (PSrp-1) [Translation, ribosomal structure and biogenesis]	NA|844aa|up_8|NZ_CP039157.1_724125_726657_+	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|35aa|up_7|NZ_CP039157.1_726698_726803_+	NA	NA|370aa|up_6|NZ_CP039157.1_726971_728082_+	PRK00578, prfB, peptide chain release factor 2; Validated	NA|36aa|up_5|NZ_CP039157.1_728235_728343_+	NA	NA|280aa|up_4|NZ_CP039157.1_728490_729330_+	COG3942, COG3942, Surface antigen [General function prediction only]	NA|217aa|up_3|NZ_CP039157.1_729503_730154_+	pfam12917, HD_2, HD containing hydrolase-like enzyme	NA|79aa|up_2|NZ_CP039157.1_730150_730387_+	COG4897, CsbA, Uncharacterized protein conserved in bacteria [Function unknown]	NA|662aa|up_1|NZ_CP039157.1_730655_732641_+	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|949aa|up_0|NZ_CP039157.1_732648_735495_+	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|311aa|down_0|NZ_CP039157.1_736101_737034_+	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|280aa|down_1|NZ_CP039157.1_737039_737879_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|down_2|NZ_CP039157.1_737886_738372_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|down_3|NZ_CP039157.1_738379_739819_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|down_4|NZ_CP039157.1_739885_740821_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|down_5|NZ_CP039157.1_741980_742892_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|down_6|NZ_CP039157.1_742888_743884_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|down_7|NZ_CP039157.1_743993_744938_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|down_8|NZ_CP039157.1_745510_746098_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|down_9|NZ_CP039157.1_746340_747243_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	6	748776-748861	6	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCACCCCAACTTGCATTGCCTGTAGAA	28	1	10	748804-748833|748804-748833|748804-748833|748804-748833|748804-748833|748804-748833|748804-748833|748804-748833|748804-748833|748804-748833	NZ_CP039157.1_694908-694879|NZ_CP039157.1_741597-741626|NZ_CP039157.1_564289-564260|NZ_CP039157.1_693942-693971|NZ_CP039157.1_994215-994244|NZ_CP039157.1_1307707-1307678|NZ_CP039157.1_1396860-1396889|NZ_CP039157.1_1968548-1968577|NZ_CP039157.1_1970179-1970208|NZ_CP039157.1_1970238-1970267	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA,NA|153aa|down_6|NZ_CP039157.1_756856_757315_+	NA|280aa|up_9|NZ_CP039157.1_737039_737879_+	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|162aa|up_8|NZ_CP039157.1_737886_738372_+	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins	NA|480aa|up_7|NZ_CP039157.1_738379_739819_+	sd00008, TPR_YbbN, C-terminal Tetratricopeptide repeat (TPR) region of YbbN and similar motifs	NA|312aa|up_6|NZ_CP039157.1_739885_740821_+	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase	NA|304aa|up_5|NZ_CP039157.1_741980_742892_+	COG1660, COG1660, Predicted P-loop-containing kinase [General function prediction only]	NA|332aa|up_4|NZ_CP039157.1_742888_743884_+	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related	NA|315aa|up_3|NZ_CP039157.1_743993_744938_+	TIGR00647, DNA_bind_WhiA, DNA-binding protein WhiA	NA|196aa|up_2|NZ_CP039157.1_745510_746098_+	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed	NA|301aa|up_1|NZ_CP039157.1_746340_747243_-	COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]	NA|210aa|up_0|NZ_CP039157.1_747945_748575_+	PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed	NA|338aa|down_0|NZ_CP039157.1_749274_750288_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|337aa|down_1|NZ_CP039157.1_750340_751351_+	TIGR01534, Glyceraldehyde-3-phosphate_dehydrogenase, glyceraldehyde-3-phosphate dehydrogenase, type I	NA|397aa|down_2|NZ_CP039157.1_751489_752680_+	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|254aa|down_3|NZ_CP039157.1_752801_753563_+	PRK00042, tpiA, triosephosphate isomerase; Provisional	NA|506aa|down_4|NZ_CP039157.1_753565_755083_+	PRK05434, PRK05434, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase	NA|435aa|down_5|NZ_CP039157.1_755212_756517_+	PRK00077, eno, enolase; Provisional	NA|153aa|down_6|NZ_CP039157.1_756856_757315_+	NA	NA|78aa|down_7|NZ_CP039157.1_757381_757615_+	COG1314, SecG, Preprotein translocase subunit SecG [Intracellular trafficking and secretion]	NA|247aa|down_8|NZ_CP039157.1_757730_758471_+	COG1647, COG1647, Esterase/lipase [General function prediction only]	NA|791aa|down_9|NZ_CP039157.1_758504_760877_+	TIGR02063, Ribonuclease_R, ribonuclease R
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	7	792451-792532	7	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCAACTTGCATTGTCTGTAGAA	24	1	2	792475-792508|792475-792508	NZ_CP039157.1_1307707-1307674|NZ_CP039157.1_1396860-1396893	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|38aa|up_1|NZ_CP039157.1_791353_791467_+,NA|144aa|down_8|NZ_CP039157.1_799567_799999_-	NA|206aa|up_9|NZ_CP039157.1_786208_786826_-	COG1279, COG1279, Lysine efflux permease [General function prediction only]	NA|165aa|up_8|NZ_CP039157.1_786980_787475_-	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain	NA|141aa|up_7|NZ_CP039157.1_787873_788296_-	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily	NA|239aa|up_6|NZ_CP039157.1_788443_789160_+	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase	NA|180aa|up_5|NZ_CP039157.1_789242_789782_+	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA	NA|107aa|up_4|NZ_CP039157.1_789931_790252_-	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|119aa|up_3|NZ_CP039157.1_790395_790752_+	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC	NA|127aa|up_2|NZ_CP039157.1_790909_791290_+	PRK01202, PRK01202, glycine cleavage system protein GcvH	NA|38aa|up_1|NZ_CP039157.1_791353_791467_+	NA	NA|293aa|up_0|NZ_CP039157.1_791468_792347_+	COG3878, COG3878, Uncharacterized protein conserved in bacteria [Function unknown]	NA|129aa|down_0|NZ_CP039157.1_793088_793475_+	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]	NA|99aa|down_1|NZ_CP039157.1_793467_793764_+	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains	NA|342aa|down_2|NZ_CP039157.1_794013_795039_+	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]	NA|232aa|down_3|NZ_CP039157.1_795031_795727_+	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism]	NA|274aa|down_4|NZ_CP039157.1_795744_796566_+	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism]	NA|407aa|down_5|NZ_CP039157.1_796708_797929_-	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|243aa|down_6|NZ_CP039157.1_798017_798746_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|243aa|down_7|NZ_CP039157.1_798769_799498_-	pfam02876, Stap_Strp_tox_C, Staphylococcal/Streptococcal toxin, beta-grasp domain	NA|144aa|down_8|NZ_CP039157.1_799567_799999_-	NA	NA|153aa|down_9|NZ_CP039157.1_800015_800474_-	pfam06114, Peptidase_M78, IrrE N-terminal-like domain
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	8	984287-984374	8	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	CCCCTAACAACTAAAAGTTGTAAGG	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|40aa|up_0|NZ_CP039157.1_984163_984283_+,NA|45aa|down_0|NZ_CP039157.1_984383_984518_-,NA|432aa|down_1|NZ_CP039157.1_984669_985965_+,NA|68aa|down_2|NZ_CP039157.1_985985_986189_-	NA|730aa|up_9|NZ_CP039157.1_972741_974931_+	PRK01213, PRK01213, phosphoribosylformylglycinamidine synthase subunit PurL	NA|495aa|up_8|NZ_CP039157.1_974909_976394_+	PRK07272, PRK07272, amidophosphoribosyltransferase; Provisional	NA|343aa|up_7|NZ_CP039157.1_976386_977415_+	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional	NA|189aa|up_6|NZ_CP039157.1_977417_977984_+	COG0299, PurN, Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]	NA|493aa|up_5|NZ_CP039157.1_977998_979477_+	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|416aa|up_4|NZ_CP039157.1_979498_980746_+	PRK13790, PRK13790, phosphoribosylamine--glycine ligase; Provisional	NA|269aa|up_3|NZ_CP039157.1_981010_981817_-	COG0619, CbiQ, ABC-type cobalt transport system, permease component CbiQ and related transporters [Inorganic ion transport and metabolism]	NA|467aa|up_2|NZ_CP039157.1_981809_983210_-	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system	NA|192aa|up_1|NZ_CP039157.1_983224_983800_-	COG4721, COG4721, ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]	NA|40aa|up_0|NZ_CP039157.1_984163_984283_+	NA	NA|45aa|down_0|NZ_CP039157.1_984383_984518_-	NA	NA|432aa|down_1|NZ_CP039157.1_984669_985965_+	NA	NA|68aa|down_2|NZ_CP039157.1_985985_986189_-	NA	NA|391aa|down_3|NZ_CP039157.1_986389_987562_+	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only]	NA|181aa|down_4|NZ_CP039157.1_987615_988158_+	pfam05128, DUF697, Domain of unknown function (DUF697)	NA|89aa|down_5|NZ_CP039157.1_988311_988578_+	PRK13780, PRK13780, phosphocarrier protein HPr; Provisional	NA|573aa|down_6|NZ_CP039157.1_988580_990299_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|78aa|down_7|NZ_CP039157.1_990535_990769_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|454aa|down_8|NZ_CP039157.1_990966_992328_+	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I	NA|340aa|down_9|NZ_CP039157.1_992324_993344_+	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion]
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	9	1111089-1111174	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	AAAGTCAGCTTACAATAATGTGCAAGTTGG	30	1	7	1111119-1111144|1111119-1111144|1111119-1111144|1111119-1111144|1111119-1111144|1111119-1111144|1111119-1111144	NZ_CP039157.1_741238-741213|NZ_CP039157.1_741294-741269|NZ_CP039157.1_741350-741325|NZ_CP039157.1_741406-741381|NZ_CP039157.1_741462-741437|NZ_CP039157.1_741518-741493|NZ_CP039157.1_2749259-2749234	NA	1	1	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|169aa|up_8|NZ_CP039157.1_1104784_1105291_+,NA|62aa|up_5|NZ_CP039157.1_1107372_1107558_-,NA|83aa|up_4|NZ_CP039157.1_1107767_1108016_-,NA|78aa|up_3|NZ_CP039157.1_1108179_1108413_-,NA|49aa|up_1|NZ_CP039157.1_1110521_1110668_+,NA|75aa|up_0|NZ_CP039157.1_1110624_1110849_+,NA|76aa|down_6|NZ_CP039157.1_1118148_1118376_+	NA|134aa|up_9|NZ_CP039157.1_1103711_1104113_-	PRK13033, PRK13033, formyl peptide receptor-like 1 inhibitory protein; Reviewed	NA|169aa|up_8|NZ_CP039157.1_1104784_1105291_+	NA	NA|166aa|up_7|NZ_CP039157.1_1105549_1106047_+	pfam12199, efb-c, Extracellular fibrinogen binding protein C terminal	NA|117aa|up_6|NZ_CP039157.1_1106200_1106551_+	pfam11546, CompInhib_SCIN, Staphylococcal complement inhibitor SCIN	NA|62aa|up_5|NZ_CP039157.1_1107372_1107558_-	NA	NA|83aa|up_4|NZ_CP039157.1_1107767_1108016_-	NA	NA|78aa|up_3|NZ_CP039157.1_1108179_1108413_-	NA	NA|320aa|up_2|NZ_CP039157.1_1108889_1109849_-	TIGR01002, synergohymenotropic_toxin, beta-channel forming cytolysin	NA|49aa|up_1|NZ_CP039157.1_1110521_1110668_+	NA	NA|75aa|up_0|NZ_CP039157.1_1110624_1110849_+	NA	NA|239aa|down_0|NZ_CP039157.1_1111349_1112066_-	PRK13350, PRK13350, superantigen-like protein; Reviewed	NA|242aa|down_1|NZ_CP039157.1_1112173_1112899_-	PRK13349, PRK13349, superantigen-like protein; Reviewed	NA|242aa|down_2|NZ_CP039157.1_1112993_1113719_-	PRK13043, PRK13043, superantigen-like protein; Reviewed	NA|334aa|down_3|NZ_CP039157.1_1114156_1115158_+	PRK04284, PRK04284, ornithine carbamoyltransferase; Provisional	NA|311aa|down_4|NZ_CP039157.1_1115180_1116113_+	PRK12353, PRK12353, putative amino acid kinase; Reviewed	NA|502aa|down_5|NZ_CP039157.1_1116335_1117841_+	COG1288, COG1288, Predicted membrane protein [Function unknown]	NA|76aa|down_6|NZ_CP039157.1_1118148_1118376_+	NA	NA|316aa|down_7|NZ_CP039157.1_1118680_1119628_-	cd09325, TDT_C4-dicarb_trans, C4-dicarboxylate transporters of the Tellurite-resistance/Dicarboxylate Transporter (TDT) family	NA|63aa|down_8|NZ_CP039157.1_1119876_1120065_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|45aa|down_9|NZ_CP039157.1_1120976_1121111_+	pfam05480, Staph_haemo, Staphylococcus haemolytic protein
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	10	2196496-2196646	10	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,csa3,WYL	Type I-A	AACTTTAGTTGTTAGGGGCTCTTATGCA	28	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|77aa|up_5|NZ_CP039157.1_2191367_2191598_-,NA|364aa|up_0|NZ_CP039157.1_2195386_2196478_+,NA|35aa|down_0|NZ_CP039157.1_2196977_2197082_-,NA|31aa|down_2|NZ_CP039157.1_2199193_2199286_+	NA|237aa|up_9|NZ_CP039157.1_2186977_2187688_+	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase	NA|148aa|up_8|NZ_CP039157.1_2187808_2188252_-	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism]	NA|138aa|up_7|NZ_CP039157.1_2188451_2188865_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|458aa|up_6|NZ_CP039157.1_2189322_2190696_-	pfam01878, EVE, EVE domain	NA|77aa|up_5|NZ_CP039157.1_2191367_2191598_-	NA	NA|313aa|up_4|NZ_CP039157.1_2191628_2192567_-	COG1482, ManA, Phosphomannose isomerase [Carbohydrate transport and metabolism]	NA|222aa|up_3|NZ_CP039157.1_2193001_2193667_-	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	csa3|107aa|up_2|NZ_CP039157.1_2193818_2194139_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|327aa|up_1|NZ_CP039157.1_2194140_2195121_+	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|364aa|up_0|NZ_CP039157.1_2195386_2196478_+	NA	NA|35aa|down_0|NZ_CP039157.1_2196977_2197082_-	NA	NA|379aa|down_1|NZ_CP039157.1_2197768_2198905_-	pfam02037, SAP, SAP domain	NA|31aa|down_2|NZ_CP039157.1_2199193_2199286_+	NA	NA|286aa|down_3|NZ_CP039157.1_2199990_2200848_-	COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only]	NA|261aa|down_4|NZ_CP039157.1_2200915_2201698_-	COG1119, ModF, ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA [Inorganic ion transport and metabolism]	NA|602aa|down_5|NZ_CP039157.1_2201929_2203735_-	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|513aa|down_6|NZ_CP039157.1_2204415_2205954_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|711aa|down_7|NZ_CP039157.1_2205988_2208121_+	COG3711, BglG, Transcriptional antiterminator [Transcription]	NA|145aa|down_8|NZ_CP039157.1_2208132_2208567_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|369aa|down_9|NZ_CP039157.1_2208566_2209673_+	PRK02318, PRK02318, mannitol-1-phosphate 5-dehydrogenase; Provisional
GCF_005706035.1_ASM570603v1	NZ_CP039157	Staphylococcus aureus strain P10 chromosome, complete genome	11	2312378-2312571	1	CRT	no		cas3,DEDDh,DinG,csa3,WYL	Orphan	TGTTGGGGCCCCGCCAACTTGCA	23	3	23	2312401-2312433|2312401-2312433|2312401-2312433|2312401-2312433|2312401-2312433|2312401-2312433|2312401-2312433|2312457-2312492|2312457-2312492|2312457-2312492|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548|2312516-2312548	NZ_CP039157.1_741529-741561|NZ_CP039157.1_1396906-1396938|NZ_CP039157.1_1968651-1968683|NZ_CP039157.1_1968710-1968742|NZ_CP039157.1_2585620-2585652|NZ_CP039157.1_1111108-1111076|NZ_CP039157.1_1307661-1307629|NZ_CP039157.1_1111055-1111020|NZ_CP039157.1_1800257-1800222|NZ_CP039157.1_1979513-1979548|NZ_CP039157.1_741193-741225|NZ_CP039157.1_741249-741281|NZ_CP039157.1_741305-741337|NZ_CP039157.1_741361-741393|NZ_CP039157.1_741417-741449|NZ_CP039157.1_741473-741505|NZ_CP039157.1_741529-741561|NZ_CP039157.1_1396906-1396938|NZ_CP039157.1_1968651-1968683|NZ_CP039157.1_1968710-1968742|NZ_CP039157.1_2585620-2585652|NZ_CP039157.1_1111108-1111076|NZ_CP039157.1_1307661-1307629	NA	3	3	Orphan	cas3,DEDDh,DinG,csa3,WYL	NA|55aa|up_9|NZ_CP039157.1_2302905_2303070_+,NA|106aa|up_8|NZ_CP039157.1_2303314_2303632_+,NA|84aa|up_5|NZ_CP039157.1_2308756_2309008_+,NA|57aa|up_0|NZ_CP039157.1_2312147_2312318_+,NA	NA|55aa|up_9|NZ_CP039157.1_2302905_2303070_+	NA	NA|106aa|up_8|NZ_CP039157.1_2303314_2303632_+	NA	NA|1056aa|up_7|NZ_CP039157.1_2303818_2306986_-	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|422aa|up_6|NZ_CP039157.1_2307102_2308368_-	COG2348, COG2348, Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]	NA|84aa|up_5|NZ_CP039157.1_2308756_2309008_+	NA	NA|255aa|up_4|NZ_CP039157.1_2308999_2309764_-	pfam13468, Glyoxalase_3, Glyoxalase-like domain	NA|147aa|up_3|NZ_CP039157.1_2309925_2310366_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|404aa|up_2|NZ_CP039157.1_2310358_2311570_+	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily	NA|117aa|up_1|NZ_CP039157.1_2311671_2312022_-	TIGR01889, Pleiotropic_Regulator_Of_Virulence, staphylococcal accessory regulator family	NA|57aa|up_0|NZ_CP039157.1_2312147_2312318_+	NA	NA|341aa|down_0|NZ_CP039157.1_2312712_2313735_-	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial	NA|200aa|down_1|NZ_CP039157.1_2313754_2314354_-	PRK00317, mobA, molybdopterin-guanine dinucleotide biosynthesis protein MobA; Reviewed	NA|78aa|down_2|NZ_CP039157.1_2314360_2314594_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|149aa|down_3|NZ_CP039157.1_2314599_2315046_-	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism]	NA|162aa|down_4|NZ_CP039157.1_2315059_2315545_-	COG1763, MobB, Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]	NA|420aa|down_5|NZ_CP039157.1_2315541_2316801_-	cd00887, MoeA, MoeA family	NA|165aa|down_6|NZ_CP039157.1_2316863_2317358_+	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|169aa|down_7|NZ_CP039157.1_2317359_2317866_-	COG0521, MoaB, Molybdopterin biosynthesis enzymes [Coenzyme metabolism]	NA|335aa|down_8|NZ_CP039157.1_2317896_2318901_-	PRK07688, PRK07688, thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated	NA|202aa|down_9|NZ_CP039157.1_2319070_2319676_-	COG4148, ModC, ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
