assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	1	351618-352651	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	PD-DExK,cas10,csm3gr7,csm4gr5,cas6	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type III-B,Type III-D,Type III-A,Type III-C	GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTANATGAGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	14,15,15	15	TypeIII-B,TypeIII-D,TypeIII-A,TypeIII-C	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|68aa|up_9|NZ_CP040441.1_340749_340953_+,NA|182aa|up_8|NZ_CP040441.1_340983_341529_+,NA|339aa|up_7|NZ_CP040441.1_341591_342608_-,NA|340aa|up_6|NZ_CP040441.1_342672_343692_-,NA|340aa|up_5|NZ_CP040441.1_343757_344777_-,NA|173aa|up_0|NZ_CP040441.1_348804_349323_+,NA|186aa|down_2|NZ_CP040441.1_357216_357774_-,NA|191aa|down_3|NZ_CP040441.1_358591_359164_-,PD-DExK|282aa|down_6|NZ_CP040441.1_365019_365865_+	NA|68aa|up_9|NZ_CP040441.1_340749_340953_+	NA	NA|182aa|up_8|NZ_CP040441.1_340983_341529_+	NA	NA|339aa|up_7|NZ_CP040441.1_341591_342608_-	NA	NA|340aa|up_6|NZ_CP040441.1_342672_343692_-	NA	NA|340aa|up_5|NZ_CP040441.1_343757_344777_-	NA	NA|279aa|up_4|NZ_CP040441.1_344846_345683_-	pfam13529, Peptidase_C39_2, Peptidase_C39 like family	NA|46aa|up_3|NZ_CP040441.1_345924_346062_+	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|313aa|up_2|NZ_CP040441.1_346939_347878_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|191aa|up_1|NZ_CP040441.1_347904_348477_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|173aa|up_0|NZ_CP040441.1_348804_349323_+	NA	NA|371aa|down_0|NZ_CP040441.1_352722_353834_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|406aa|down_1|NZ_CP040441.1_355812_357030_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|down_2|NZ_CP040441.1_357216_357774_-	NA	NA|191aa|down_3|NZ_CP040441.1_358591_359164_-	NA	NA|546aa|down_4|NZ_CP040441.1_359659_361297_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|250aa|down_5|NZ_CP040441.1_361698_362448_+	pfam01636, APH, Phosphotransferase enzyme family	PD-DExK|282aa|down_6|NZ_CP040441.1_365019_365865_+	NA	cas10|675aa|down_7|NZ_CP040441.1_365864_367889_+	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	NA|348aa|down_8|NZ_CP040441.1_367954_368999_+	pfam13358, DDE_3, DDE superfamily endonuclease	csm3gr7|240aa|down_9|NZ_CP040441.1_369103_369823_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	2	353843-355533	2,2,2	CRT,CRISPRCasFinder,PILER-CR	no	PD-DExK,cas10,csm3gr7,csm4gr5,cas6	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type III-B,Type III-D,Type III-A,Type III-C	GTCGCACTCTANATGAGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT,ATGAGTGCGTGGATTGAAAT	32,32,20	0	0	NA	NA	I-C:I-C:NA	25,24,22	25	TypeIII-B,TypeIII-D,TypeIII-A,TypeIII-C	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|182aa|up_9|NZ_CP040441.1_340983_341529_+,NA|339aa|up_8|NZ_CP040441.1_341591_342608_-,NA|340aa|up_7|NZ_CP040441.1_342672_343692_-,NA|340aa|up_6|NZ_CP040441.1_343757_344777_-,NA|173aa|up_1|NZ_CP040441.1_348804_349323_+,NA|186aa|down_1|NZ_CP040441.1_357216_357774_-,NA|191aa|down_2|NZ_CP040441.1_358591_359164_-,PD-DExK|282aa|down_5|NZ_CP040441.1_365019_365865_+	NA|182aa|up_9|NZ_CP040441.1_340983_341529_+	NA	NA|339aa|up_8|NZ_CP040441.1_341591_342608_-	NA	NA|340aa|up_7|NZ_CP040441.1_342672_343692_-	NA	NA|340aa|up_6|NZ_CP040441.1_343757_344777_-	NA	NA|279aa|up_5|NZ_CP040441.1_344846_345683_-	pfam13529, Peptidase_C39_2, Peptidase_C39 like family	NA|46aa|up_4|NZ_CP040441.1_345924_346062_+	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|313aa|up_3|NZ_CP040441.1_346939_347878_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|191aa|up_2|NZ_CP040441.1_347904_348477_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|173aa|up_1|NZ_CP040441.1_348804_349323_+	NA	NA|371aa|up_0|NZ_CP040441.1_352722_353834_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|406aa|down_0|NZ_CP040441.1_355812_357030_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|down_1|NZ_CP040441.1_357216_357774_-	NA	NA|191aa|down_2|NZ_CP040441.1_358591_359164_-	NA	NA|546aa|down_3|NZ_CP040441.1_359659_361297_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|250aa|down_4|NZ_CP040441.1_361698_362448_+	pfam01636, APH, Phosphotransferase enzyme family	PD-DExK|282aa|down_5|NZ_CP040441.1_365019_365865_+	NA	cas10|675aa|down_6|NZ_CP040441.1_365864_367889_+	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	NA|348aa|down_7|NZ_CP040441.1_367954_368999_+	pfam13358, DDE_3, DDE superfamily endonuclease	csm3gr7|240aa|down_8|NZ_CP040441.1_369103_369823_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm4gr5|339aa|down_9|NZ_CP040441.1_369824_370841_+	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	3	362740-364429	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type III-A,Type III-B,Type I-C,Type I-U,Type III-D,Type III-C	GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	24,24,25	25	TypeIII-A,TypeIII-B,TypeI-U,TypeIII-C,TypeIII-D,TypeI-C	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|173aa|up_6|NZ_CP040441.1_348804_349323_+,NA|186aa|up_3|NZ_CP040441.1_357216_357774_-,NA|191aa|up_2|NZ_CP040441.1_358591_359164_-,PD-DExK|282aa|down_0|NZ_CP040441.1_365019_365865_+,NA|276aa|down_5|NZ_CP040441.1_370818_371646_+	NA|46aa|up_9|NZ_CP040441.1_345924_346062_+	pfam14552, Tautomerase_2, Tautomerase enzyme	NA|313aa|up_8|NZ_CP040441.1_346939_347878_-	cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs	NA|191aa|up_7|NZ_CP040441.1_347904_348477_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|173aa|up_6|NZ_CP040441.1_348804_349323_+	NA	NA|371aa|up_5|NZ_CP040441.1_352722_353834_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|406aa|up_4|NZ_CP040441.1_355812_357030_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|186aa|up_3|NZ_CP040441.1_357216_357774_-	NA	NA|191aa|up_2|NZ_CP040441.1_358591_359164_-	NA	NA|546aa|up_1|NZ_CP040441.1_359659_361297_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|250aa|up_0|NZ_CP040441.1_361698_362448_+	pfam01636, APH, Phosphotransferase enzyme family	PD-DExK|282aa|down_0|NZ_CP040441.1_365019_365865_+	NA	cas10|675aa|down_1|NZ_CP040441.1_365864_367889_+	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	NA|348aa|down_2|NZ_CP040441.1_367954_368999_+	pfam13358, DDE_3, DDE superfamily endonuclease	csm3gr7|240aa|down_3|NZ_CP040441.1_369103_369823_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm4gr5|339aa|down_4|NZ_CP040441.1_369824_370841_+	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|276aa|down_5|NZ_CP040441.1_370818_371646_+	NA	cas6|292aa|down_6|NZ_CP040441.1_371638_372514_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|371aa|down_7|NZ_CP040441.1_373351_374463_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas3|801aa|down_8|NZ_CP040441.1_375483_377886_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|down_9|NZ_CP040441.1_378289_379000_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	4	372726-373284	4,4,4	PILER-CR,CRISPRCasFinder,CRT	no	PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type III-A,Type III-B,Type I-C,Type I-U,Type III-D,Type III-C	GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	8,8,8	8	TypeIII-A,TypeIII-B,TypeI-U,TypeIII-C,TypeIII-D,TypeI-C	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|191aa|up_9|NZ_CP040441.1_358591_359164_-,PD-DExK|282aa|up_6|NZ_CP040441.1_365019_365865_+,NA|276aa|up_1|NZ_CP040441.1_370818_371646_+,NA|215aa|down_8|NZ_CP040441.1_385935_386580_-	NA|191aa|up_9|NZ_CP040441.1_358591_359164_-	NA	NA|546aa|up_8|NZ_CP040441.1_359659_361297_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|250aa|up_7|NZ_CP040441.1_361698_362448_+	pfam01636, APH, Phosphotransferase enzyme family	PD-DExK|282aa|up_6|NZ_CP040441.1_365019_365865_+	NA	cas10|675aa|up_5|NZ_CP040441.1_365864_367889_+	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	NA|348aa|up_4|NZ_CP040441.1_367954_368999_+	pfam13358, DDE_3, DDE superfamily endonuclease	csm3gr7|240aa|up_3|NZ_CP040441.1_369103_369823_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm4gr5|339aa|up_2|NZ_CP040441.1_369824_370841_+	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|276aa|up_1|NZ_CP040441.1_370818_371646_+	NA	cas6|292aa|up_0|NZ_CP040441.1_371638_372514_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|371aa|down_0|NZ_CP040441.1_373351_374463_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas3|801aa|down_1|NZ_CP040441.1_375483_377886_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|down_2|NZ_CP040441.1_378289_379000_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|628aa|down_3|NZ_CP040441.1_379001_380885_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|284aa|down_4|NZ_CP040441.1_380881_381733_+	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas4|220aa|down_5|NZ_CP040441.1_381722_382382_+	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas1|344aa|down_6|NZ_CP040441.1_382378_383410_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|down_7|NZ_CP040441.1_383418_383709_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|215aa|down_8|NZ_CP040441.1_385935_386580_-	NA	NA|406aa|down_9|NZ_CP040441.1_387234_388452_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	5	374543-375042	5,5,5	PILER-CR,CRISPRCasFinder,CRT	no	PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas3,cas5,cas8c,cas7,cas4,cas1,cas2	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type III-A,Type III-B,Type I-C,Type I-U,Type III-D,Type III-C	GTCGCACTCTATATGGGTGCGTGGATTGAAAT,GTCGCACTCTATATGAGTGCGTGGATTGAAAT,GTCGCACTCTNTATGNGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	7,7,7	7	TypeIII-A,TypeIII-B,TypeI-U,TypeIII-C,TypeIII-D,TypeI-C	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	PD-DExK|282aa|up_7|NZ_CP040441.1_365019_365865_+,NA|276aa|up_2|NZ_CP040441.1_370818_371646_+,NA|215aa|down_7|NZ_CP040441.1_385935_386580_-	NA|546aa|up_9|NZ_CP040441.1_359659_361297_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|250aa|up_8|NZ_CP040441.1_361698_362448_+	pfam01636, APH, Phosphotransferase enzyme family	PD-DExK|282aa|up_7|NZ_CP040441.1_365019_365865_+	NA	cas10|675aa|up_6|NZ_CP040441.1_365864_367889_+	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	NA|348aa|up_5|NZ_CP040441.1_367954_368999_+	pfam13358, DDE_3, DDE superfamily endonuclease	csm3gr7|240aa|up_4|NZ_CP040441.1_369103_369823_+	COG1337, COG1337, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	csm4gr5|339aa|up_3|NZ_CP040441.1_369824_370841_+	COG1567, COG1567, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	NA|276aa|up_2|NZ_CP040441.1_370818_371646_+	NA	cas6|292aa|up_1|NZ_CP040441.1_371638_372514_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|371aa|up_0|NZ_CP040441.1_373351_374463_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas3|801aa|down_0|NZ_CP040441.1_375483_377886_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|down_1|NZ_CP040441.1_378289_379000_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|628aa|down_2|NZ_CP040441.1_379001_380885_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|284aa|down_3|NZ_CP040441.1_380881_381733_+	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas4|220aa|down_4|NZ_CP040441.1_381722_382382_+	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas1|344aa|down_5|NZ_CP040441.1_382378_383410_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|down_6|NZ_CP040441.1_383418_383709_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|215aa|down_7|NZ_CP040441.1_385935_386580_-	NA	NA|406aa|down_8|NZ_CP040441.1_387234_388452_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|117aa|down_9|NZ_CP040441.1_388889_389240_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	6	383891-385513	6,6,6	CRISPRCasFinder,CRT,PILER-CR	no	PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas3,cas5,cas8c,cas7,cas4,cas1,cas2,WYL	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type III-A,Type III-B,Type I-C,Type I-U,Type III-D,Type III-C	GTCGCACTCTTCATGGGTGCGTGGATTGAAAT,GTCGCACTCTTCATGGGTGCGTGGATTGAAAT,GTCGCACTCTTCATGGGTGCGTGGATTGAAAT	32,32,32	0	0	NA	NA	I-C:I-C:I-C	24,24,20	24	TypeIII-A,TypeIII-B,TypeI-U,TypeIII-C,TypeIII-D,TypeI-C	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|276aa|up_9|NZ_CP040441.1_370818_371646_+,NA|215aa|down_0|NZ_CP040441.1_385935_386580_-	NA|276aa|up_9|NZ_CP040441.1_370818_371646_+	NA	cas6|292aa|up_8|NZ_CP040441.1_371638_372514_+	pfam10040, CRISPR_Cas6, CRISPR-associated endoribonuclease Cas6	NA|371aa|up_7|NZ_CP040441.1_373351_374463_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas3|801aa|up_6|NZ_CP040441.1_375483_377886_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas5|237aa|up_5|NZ_CP040441.1_378289_379000_+	TIGR01876, cas_Cas5d, CRISPR-associated protein Cas5, subtype I-C/DVULG	cas8c|628aa|up_4|NZ_CP040441.1_379001_380885_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|284aa|up_3|NZ_CP040441.1_380881_381733_+	COG3649, COG3649, CRISPR system related protein [Defense mechanisms]	cas4|220aa|up_2|NZ_CP040441.1_381722_382382_+	COG1468, COG1468, CRISPR-associated protein Cas4 (RecB family exonuclease) [Defense    mechanisms]	cas1|344aa|up_1|NZ_CP040441.1_382378_383410_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|NZ_CP040441.1_383418_383709_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|215aa|down_0|NZ_CP040441.1_385935_386580_-	NA	NA|406aa|down_1|NZ_CP040441.1_387234_388452_-	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|117aa|down_2|NZ_CP040441.1_388889_389240_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|103aa|down_3|NZ_CP040441.1_389370_389679_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|517aa|down_4|NZ_CP040441.1_389809_391360_+	cd08498, PBP2_NikA_DppA_OppA_like_2, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|306aa|down_5|NZ_CP040441.1_391408_392326_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|306aa|down_6|NZ_CP040441.1_392342_393260_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|330aa|down_7|NZ_CP040441.1_393272_394262_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|333aa|down_8|NZ_CP040441.1_394258_395257_+	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional	NA|375aa|down_9|NZ_CP040441.1_395257_396382_+	cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	7	399679-401818	7,7,7	CRT,CRISPRCasFinder,PILER-CR	no	cas7,cas4,cas1,cas2,WYL,cas6,cas8b2,cas5,cas3	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Unclear	ATTTATAACCCACTAAGTTCAGATAAAAC,ATTTATAACCCACTAAGTTCAGATAAAAC,ATTTATAACCCACTAAGTTCAGATAAAAC	29,29,29	0	0	NA	NA	NA:NA:NA	32,31,31	32	Unclear	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA,NA|67aa|down_0|NZ_CP040441.1_402409_402610_-	NA|117aa|up_9|NZ_CP040441.1_388889_389240_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|103aa|up_8|NZ_CP040441.1_389370_389679_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|517aa|up_7|NZ_CP040441.1_389809_391360_+	cd08498, PBP2_NikA_DppA_OppA_like_2, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|306aa|up_6|NZ_CP040441.1_391408_392326_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|306aa|up_5|NZ_CP040441.1_392342_393260_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|330aa|up_4|NZ_CP040441.1_393272_394262_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|333aa|up_3|NZ_CP040441.1_394258_395257_+	PRK15079, PRK15079, oligopeptide ABC transporter ATP-binding protein OppF; Provisional	NA|375aa|up_2|NZ_CP040441.1_395257_396382_+	cd03885, M20_CPDG2, M20 Peptidase Glutamate carboxypeptidase, a periplasmic enzyme	NA|470aa|up_1|NZ_CP040441.1_396588_397998_+	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	WYL|339aa|up_0|NZ_CP040441.1_398568_399585_-	pfam13280, WYL, WYL domain	NA|67aa|down_0|NZ_CP040441.1_402409_402610_-	NA	NA|515aa|down_1|NZ_CP040441.1_403479_405024_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|255aa|down_2|NZ_CP040441.1_405023_405788_+	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	cas6|245aa|down_3|NZ_CP040441.1_406504_407239_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b2|600aa|down_4|NZ_CP040441.1_407235_409035_+	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|298aa|down_5|NZ_CP040441.1_409027_409921_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|231aa|down_6|NZ_CP040441.1_409920_410613_+	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|773aa|down_7|NZ_CP040441.1_410665_412984_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas1|329aa|down_8|NZ_CP040441.1_413526_414513_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|88aa|down_9|NZ_CP040441.1_414515_414779_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	8	414990-416267	8,8,8	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Unclear	ATTTATAACCCTCTATGTTCAGATAAAAC,GTTTTATCTGAACATAGAGGGTTATAAAT,GTTTTATCTGAACATAGAGGGTTATAAAT	29,29,29	0	0	NA	NA	NA:NA:NA	19,19,19	19	Unclear	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|67aa|up_9|NZ_CP040441.1_402409_402610_-,NA|226aa|down_8|NZ_CP040441.1_424319_424997_-	NA|67aa|up_9|NZ_CP040441.1_402409_402610_-	NA	NA|515aa|up_8|NZ_CP040441.1_403479_405024_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|255aa|up_7|NZ_CP040441.1_405023_405788_+	COG1484, DnaC, DNA replication protein [DNA replication, recombination, and repair]	cas6|245aa|up_6|NZ_CP040441.1_406504_407239_+	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6	cas8b2|600aa|up_5|NZ_CP040441.1_407235_409035_+	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|298aa|up_4|NZ_CP040441.1_409027_409921_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|231aa|up_3|NZ_CP040441.1_409920_410613_+	cd09658, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|773aa|up_2|NZ_CP040441.1_410665_412984_+	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3	cas1|329aa|up_1|NZ_CP040441.1_413526_414513_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|88aa|up_0|NZ_CP040441.1_414515_414779_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|198aa|down_0|NZ_CP040441.1_416744_417338_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|123aa|down_1|NZ_CP040441.1_417375_417744_+	pfam17329, DUF5367, Family of unknown function (DUF5367)	NA|247aa|down_2|NZ_CP040441.1_417913_418654_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|175aa|down_3|NZ_CP040441.1_419283_419808_+	COG2311, COG2311, Predicted membrane protein [Function unknown]	NA|439aa|down_4|NZ_CP040441.1_419937_421254_+	COG2031, AtoE, Short chain fatty acids transporter [Lipid metabolism]	NA|249aa|down_5|NZ_CP040441.1_421344_422091_+	pfam18014, Acetyltransf_18, Acetyltransferase (GNAT) domain	NA|276aa|down_6|NZ_CP040441.1_422550_423378_+	COG3338, Cah, Carbonic anhydrase [Inorganic ion transport and metabolism]	NA|198aa|down_7|NZ_CP040441.1_423694_424288_+	PRK13756, PRK13756, TetR family transcriptional regulator	NA|226aa|down_8|NZ_CP040441.1_424319_424997_-	NA	NA|318aa|down_9|NZ_CP040441.1_426510_427464_+	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only]
GCF_005671335.1_ASM567133v1	NZ_CP040441	Bacillus halodurans isolate LB-1 chromosome, complete genome	9	1014433-1014534	9	CRISPRCasFinder	no	csa3	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	Type I-A	AAACAAACGCTCAAGAAGTAAAGC	24	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,PD-DExK,cas10,csm3gr7,csm4gr5,cas6,cas5,cas8c,cas7,cas4,cas1,cas2,WYL,cas8b2,csa3,casR,DinG,DEDDh	NA|108aa|up_8|NZ_CP040441.1_1007963_1008287_+,NA|112aa|up_4|NZ_CP040441.1_1010618_1010954_-,NA|74aa|up_1|NZ_CP040441.1_1013266_1013488_-,NA|198aa|down_6|NZ_CP040441.1_1021339_1021933_+	NA|328aa|up_9|NZ_CP040441.1_1006902_1007886_-	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only]	NA|108aa|up_8|NZ_CP040441.1_1007963_1008287_+	NA	NA|373aa|up_7|NZ_CP040441.1_1008283_1009402_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|253aa|up_6|NZ_CP040441.1_1009379_1010138_+	cd05233, SDR_c, classical (c) SDRs	NA|137aa|up_5|NZ_CP040441.1_1010153_1010564_+	pfam11337, DUF3139, Protein of unknown function (DUF3139)	NA|112aa|up_4|NZ_CP040441.1_1010618_1010954_-	NA	NA|323aa|up_3|NZ_CP040441.1_1011009_1011978_-	cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)	NA|386aa|up_2|NZ_CP040441.1_1011995_1013153_-	PRK07681, PRK07681, LL-diaminopimelate aminotransferase	NA|74aa|up_1|NZ_CP040441.1_1013266_1013488_-	NA	NA|250aa|up_0|NZ_CP040441.1_1013583_1014333_+	PRK08063, PRK08063, enoyl-[acyl-carrier-protein] reductase FabL	NA|176aa|down_0|NZ_CP040441.1_1015041_1015569_+	PRK13662, PRK13662, hypothetical protein; Provisional	NA|582aa|down_1|NZ_CP040441.1_1015759_1017505_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|361aa|down_2|NZ_CP040441.1_1017653_1018736_-	COG4129, COG4129, Predicted membrane protein [Function unknown]	NA|435aa|down_3|NZ_CP040441.1_1018967_1020272_-	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional	NA|108aa|down_4|NZ_CP040441.1_1020434_1020758_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	csa3|100aa|down_5|NZ_CP040441.1_1021021_1021321_+	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|198aa|down_6|NZ_CP040441.1_1021339_1021933_+	NA	NA|142aa|down_7|NZ_CP040441.1_1022038_1022464_+	pfam07885, Ion_trans_2, Ion channel	NA|170aa|down_8|NZ_CP040441.1_1022497_1023007_+	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|317aa|down_9|NZ_CP040441.1_1023028_1023979_+	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase
