The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP040234	Citrobacter sp. TBCP-5362 chromosome, complete genome	4569707	2785373	2891152	4569707	tRNA,capsid,terminase,holin,tail,head,protease,portal,integrase	Cronobacter_phage(38.89%)	89	2798933:2798949	2867027:2867043
WP_114848414.1|2785373_2786774_+|tRNA	asparagine--tRNA ligase	tRNA	A0A2K9V902	Bandra_megavirus	35.9	2.2e-80
WP_123907538.1|2787372_2788488_+	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	56.8	1.2e-105
WP_049009177.1|2788672_2789863_+	aspartate transaminase	NA	NA	NA	NA	NA
WP_114848416.1|2789937_2790585_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_012132998.1|2790613_2791162_-	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	4.1e-06
WP_012132999.1|2791342_2793205_-	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_114848417.1|2793477_2797947_-	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_024130476.1|2797946_2798651_-	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_012133002.1|2798631_2799954_-	chromosome partition protein MukF	NA	NA	NA	NA	NA
2798933:2798949	attL	TCGCCGGTCACCTCTTC	NA	NA	NA	NA
WP_114848418.1|2799957_2800737_-|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_114848419.1|2800872_2801652_+	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
WP_012133006.1|2801628_2802522_-	YcbJ family phosphotransferase	NA	NA	NA	NA	NA
WP_114848420.1|2802676_2803423_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_012133009.1|2803419_2803602_-	protein YcaR	NA	NA	NA	NA	NA
WP_114848421.1|2803653_2804886_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_114848422.1|2804929_2805907_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_012133012.1|2805903_2807652_-	lipid A ABC transporter ATP-binding protein/permease MsbA	NA	W8CYL7	Bacillus_phage	29.9	1.1e-57
WP_114848423.1|2807688_2809953_-	ComEC family protein	NA	NA	NA	NA	NA
WP_000167332.1|2810347_2810632_-	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	4.1e-10
WP_012133016.1|2810789_2812463_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
WP_012133018.1|2812576_2813260_-	(d)CMP kinase	NA	NA	NA	NA	NA
WP_110494422.1|2813441_2814725_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_012133020.1|2814795_2815884_-	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	46.2	1.1e-79
WP_114848424.1|2816293_2818054_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
WP_024130478.1|2818459_2819320_+	formate transporter FocA	NA	NA	NA	NA	NA
WP_012133023.1|2819371_2821654_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.9	4.2e-161
WP_114848426.1|2823514_2825194_-	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	63.7	3.1e-206
WP_114848427.1|2825196_2825736_-	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	72.5	1.0e-57
WP_114848428.1|2825707_2826433_-	hypothetical protein	NA	F1BUK1	Cronobacter_phage	53.9	7.5e-64
WP_114848429.1|2826422_2826968_-|tail	tail fiber assembly protein	tail	U5N0T1	Enterobacteria_phage	43.3	2.1e-34
WP_114848430.1|2826981_2828862_-|tail	phage tail protein	tail	F1BUK3	Cronobacter_phage	45.5	2.3e-133
WP_114848431.1|2828867_2829464_-	hypothetical protein	NA	F1BUK5	Cronobacter_phage	76.9	2.0e-86
WP_114647431.1|2829456_2830641_-	hypothetical protein	NA	F1BUK6	Cronobacter_phage	76.8	7.7e-175
WP_114647432.1|2830637_2830967_-	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	70.6	1.9e-38
WP_114848432.1|2830966_2832931_-|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	68.7	8.1e-262
WP_137675738.1|2833118_2833376_-	hypothetical protein	NA	A5X9I7	Aeromonas_virus	61.0	1.8e-20
WP_114647436.1|2833522_2833855_-	hypothetical protein	NA	F1BUL2	Cronobacter_phage	64.5	8.5e-31
WP_000175564.1|2833854_2834196_-	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	84.2	4.0e-44
WP_114647437.1|2834192_2834489_-|holin	holin	holin	C7BGD7	Burkholderia_phage	47.1	2.4e-16
WP_114647438.1|2834498_2834954_-	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	76.2	6.1e-64
WP_114848435.1|2834950_2836078_-	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	83.5	7.8e-177
WP_114848436.1|2836074_2836779_-	hypothetical protein	NA	F1BUL6	Cronobacter_phage	60.8	3.6e-71
WP_114848437.1|2836775_2837258_-|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	47.4	5.2e-37
WP_166792762.1|2837254_2837746_-|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	60.7	1.3e-46
WP_114848438.1|2837800_2837992_-	hypothetical protein	NA	Q8W634	Enterobacteria_phage	55.2	9.5e-11
WP_114848439.1|2837993_2838707_-|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	52.6	2.1e-63
WP_114848440.1|2838717_2839746_-|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	72.2	1.8e-135
WP_114647445.1|2839780_2840617_-|capsid	phage capsid protein	capsid	F1BUM4	Cronobacter_phage	49.5	1.1e-45
WP_114848441.1|2840819_2842604_+|terminase	terminase	terminase	F1BUM5	Cronobacter_phage	69.3	8.1e-245
WP_114848442.1|2842600_2843620_+|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	68.5	1.9e-134
WP_134769555.1|2843673_2843943_+	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	76.1	7.4e-33
WP_114848443.1|2844034_2844274_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114848444.1|2844626_2844884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114848445.1|2844897_2847555_-	toprim domain-containing protein	NA	A0A077K8T2	Ralstonia_phage	46.7	3.0e-243
WP_114647451.1|2847593_2847812_-	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	40.0	3.1e-05
WP_114848446.1|2847814_2848384_-	3'-5' exoribonuclease	NA	C6ZR35	Salmonella_phage	52.2	2.2e-47
WP_114647453.1|2848393_2848729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_114848447.1|2848744_2849092_-	hypothetical protein	NA	A0A0F7LDH4	Escherichia_phage	75.0	4.5e-43
WP_114848448.1|2849199_2849499_+	helix-turn-helix transcriptional regulator	NA	Q1JS29	Enterobacteria_phage	86.9	2.5e-45
WP_114848449.1|2849565_2850561_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A0F7LBR0	Escherichia_phage	77.7	3.2e-150
WP_114647457.1|2850592_2851390_+	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.3	1.3e-21
WP_012133025.1|2851468_2852617_-	MFS transporter	NA	NA	NA	NA	NA
WP_012133028.1|2852930_2853557_+	hydrolase	NA	NA	NA	NA	NA
WP_114848450.1|2853654_2854518_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
WP_114848451.1|2854519_2855137_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	2.1e-75
WP_114848452.1|2855147_2857592_-	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	49.8	2.5e-220
WP_012133033.1|2857833_2859126_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	7.3e-94
WP_024130481.1|2859217_2860561_-	replication-associated recombination protein RarA	NA	G3MBE0	Bacillus_virus	41.6	6.6e-82
WP_024130482.1|2860571_2861183_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_114848453.1|2861305_2865226_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.5	2.8e-88
WP_000228469.1|2865360_2865855_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_049011457.1|2866402_2867371_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.0	9.4e-62
2867027:2867043	attR	GAAGAGGTGACCGGCGA	NA	NA	NA	NA
WP_071259507.1|2867484_2869251_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	25.3	8.3e-24
WP_058668953.1|2869251_2870973_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	31.2	1.2e-14
WP_012133041.1|2871017_2871722_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|2872006_2872225_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_058668952.1|2872838_2873750_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_114848454.1|2873858_2874725_+	pirin family protein	NA	NA	NA	NA	NA
WP_049011452.1|2874746_2875424_+	isochorismatase family protein	NA	NA	NA	NA	NA
WP_049011447.1|2875845_2876400_-	type I-F CRISPR-associated endoribonuclease Cas6/Csy4	NA	NA	NA	NA	NA
WP_058668949.1|2876409_2877411_-	type I-F CRISPR-associated protein Csy3	NA	A0A2D0YRR8	Vibrio_phage	38.7	4.2e-49
WP_114848455.1|2877421_2878357_-	type I-F CRISPR-associated protein Csy2	NA	NA	NA	NA	NA
WP_114848456.1|2878344_2879667_-	type I-F CRISPR-associated protein Csy1	NA	NA	NA	NA	NA
WP_114848457.1|2879684_2882915_-	type I-F CRISPR-associated helicase Cas3	NA	A0A2I7RCU8	Vibrio_phage	27.0	1.9e-82
WP_114848458.1|2882911_2883889_-	type I-F CRISPR-associated endonuclease Cas1	NA	A0A2D0YFC9	Vibrio_phage	35.0	1.5e-43
WP_012133049.1|2885896_2888173_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.4	7.4e-166
WP_012133050.1|2888203_2888524_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.9	1.6e-13
WP_000447499.1|2888847_2889069_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_047457825.1|2889205_2891152_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.9	4.1e-40
