assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	1	182369-182737	1	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Orphan	CGATGACCCGTGGAATCAACCGCA	24	0	0	NA	NA	NA	6	6	Orphan	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA|201aa|up_5|NZ_CP040235.1_175919_176522_+,NA|238aa|down_6|NZ_CP040235.1_189913_190627_+	NA|242aa|up_9|NZ_CP040235.1_172294_173020_+	PRK10847, PRK10847, DedA family protein	NA|317aa|up_8|NZ_CP040235.1_173242_174193_+	TIGR03815, CpaE_hom_Actino, helicase/secretion neighborhood CpaE-like protein	NA|356aa|up_7|NZ_CP040235.1_174199_175267_+	TIGR03819, heli_sec_ATPase, helicase/secretion neighborhood ATPase	NA|231aa|up_6|NZ_CP040235.1_175230_175923_+	COG4965, TadB, Flp pilus assembly protein TadB [Intracellular trafficking and secretion]	NA|201aa|up_5|NZ_CP040235.1_175919_176522_+	NA	NA|132aa|up_4|NZ_CP040235.1_176698_177094_+	pfam14029, DUF4244, Protein of unknown function (DUF4244)	NA|129aa|up_3|NZ_CP040235.1_177090_177477_+	pfam07811, TadE, TadE-like protein	NA|129aa|up_2|NZ_CP040235.1_177517_177904_+	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|377aa|up_1|NZ_CP040235.1_177952_179083_+	PRK11914, PRK11914, diacylglycerol kinase; Reviewed	NA|200aa|up_0|NZ_CP040235.1_179280_179880_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|201aa|down_0|NZ_CP040235.1_183012_183615_+	PRK00076, recR, recombination protein RecR; Reviewed	NA|378aa|down_1|NZ_CP040235.1_183611_184745_-	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|428aa|down_2|NZ_CP040235.1_185632_186916_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|255aa|down_3|NZ_CP040235.1_187276_188041_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|189aa|down_4|NZ_CP040235.1_188096_188663_+	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|365aa|down_5|NZ_CP040235.1_188744_189839_-	PRK08664, PRK08664, aspartate-semialdehyde dehydrogenase; Reviewed	NA|238aa|down_6|NZ_CP040235.1_189913_190627_+	NA	NA|473aa|down_7|NZ_CP040235.1_191009_192428_+	cd07383, MPP_Dcr2, Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain	NA|639aa|down_8|NZ_CP040235.1_192919_194836_+	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated	NA|805aa|down_9|NZ_CP040235.1_194907_197322_-	COG0744, MrcB, Membrane carboxypeptidase (penicillin-binding protein) [Cell envelope biogenesis, outer membrane]
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	2	300492-300577	2	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Orphan	GACAGCTCCCGCCAGCGGGAGCACTT	26	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA,NA|692aa|down_6|NZ_CP040235.1_309033_311109_+	NA|560aa|up_9|NZ_CP040235.1_287992_289672_+	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|245aa|up_8|NZ_CP040235.1_289905_290640_+	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|903aa|up_7|NZ_CP040235.1_290723_293432_-	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B	NA|94aa|up_6|NZ_CP040235.1_293543_293825_+	COG1937, COG1937, Uncharacterized protein conserved in bacteria [Function unknown]	NA|468aa|up_5|NZ_CP040235.1_293888_295292_+	pfam02646, RmuC, RmuC family	NA|186aa|up_4|NZ_CP040235.1_295360_295918_+	PRK00455, pyrE, orotate phosphoribosyltransferase; Validated	NA|283aa|up_3|NZ_CP040235.1_296011_296860_+	cd18096, SpoU-like, SAM-dependent rRNA or tRNA methylase related to SpoU	NA|100aa|up_2|NZ_CP040235.1_297026_297326_+	PRK00034, gatC, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA|514aa|up_1|NZ_CP040235.1_297329_298871_+	PRK00012, gatA, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA|500aa|up_0|NZ_CP040235.1_298896_300396_+	PRK05477, gatB, Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA|346aa|down_0|NZ_CP040235.1_300718_301756_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|105aa|down_1|NZ_CP040235.1_301766_302081_+	pfam10611, DUF2469, Protein of unknown function (DUF2469)	NA|607aa|down_2|NZ_CP040235.1_302287_304108_+	cd07061, HP_HAP_like, Histidine phosphatase domain found in histidine acid phosphatases and phytases; contains a His residue which is phosphorylated during the reaction	NA|538aa|down_3|NZ_CP040235.1_304326_305940_+	PRK07208, PRK07208, hypothetical protein; Provisional	NA|690aa|down_4|NZ_CP040235.1_306145_308215_+	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|130aa|down_5|NZ_CP040235.1_308522_308912_+	PRK09239, PRK09239, chorismate mutase; Provisional	NA|692aa|down_6|NZ_CP040235.1_309033_311109_+	NA	NA|947aa|down_7|NZ_CP040235.1_311220_314061_-	NF000540, alt_ValS, valine--tRNA ligase	NA|489aa|down_8|NZ_CP040235.1_314099_315566_-	cd08494, PBP2_NikA_DppA_OppA_like_6, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|229aa|down_9|NZ_CP040235.1_315687_316374_-	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair]
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	3	982942-983025	3	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Orphan	ATTTCGCGGAAACCGTACGATGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA,NA	NA|113aa|up_9|NZ_CP040235.1_971592_971931_+	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides	NA|392aa|up_8|NZ_CP040235.1_971949_973125_+	pfam02562, PhoH, PhoH-like protein	NA|183aa|up_7|NZ_CP040235.1_973114_973663_+	PRK00016, PRK00016, metal-binding heat shock protein; Provisional	NA|478aa|up_6|NZ_CP040235.1_973738_975172_+	COG1253, TlyC, Hemolysins and related proteins containing CBS domains [General function prediction only]	NA|355aa|up_5|NZ_CP040235.1_975173_976238_+	PRK00089, era, GTPase Era; Reviewed	NA|704aa|up_4|NZ_CP040235.1_976290_978402_-	cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases	NA|388aa|up_3|NZ_CP040235.1_978742_979906_+	cd05304, Rubrum_tdh, Rubrum transdehydrogenase NAD-binding and catalytic domains	NA|102aa|up_2|NZ_CP040235.1_979921_980227_+	pfam12769, PNTB_4TM, 4TM region of pyridine nucleotide transhydrogenase, mitoch	NA|475aa|up_1|NZ_CP040235.1_980226_981651_+	pfam02233, PNTB, NAD(P) transhydrogenase beta subunit	NA|346aa|up_0|NZ_CP040235.1_981786_982824_-	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|207aa|down_0|NZ_CP040235.1_983252_983873_+	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|376aa|down_1|NZ_CP040235.1_984096_985224_+	PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional	NA|311aa|down_2|NZ_CP040235.1_985387_986320_+	PRK12334, PRK12334, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|263aa|down_3|NZ_CP040235.1_986567_987356_+	COG2860, COG2860, Predicted membrane protein [Function unknown]	NA|87aa|down_4|NZ_CP040235.1_987607_987868_-	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|627aa|down_5|NZ_CP040235.1_988014_989895_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|470aa|down_6|NZ_CP040235.1_989894_991304_+	PRK05628, PRK05628, coproporphyrinogen III oxidase; Validated	NA|367aa|down_7|NZ_CP040235.1_991383_992484_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|407aa|down_8|NZ_CP040235.1_992580_993801_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|455aa|down_9|NZ_CP040235.1_994177_995542_-	cd13143, MATE_MepA_like, Subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins similar to Streptococcus aureus MepA
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	4	1469257-1469337	4	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Orphan	CGCACAGTGAAACCGTCTCATAT	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA|107aa|up_5|NZ_CP040235.1_1459619_1459940_-,NA|327aa|down_0|NZ_CP040235.1_1470108_1471089_+	NA|387aa|up_9|NZ_CP040235.1_1454445_1455606_+	pfam00872, Transposase_mut, Transposase, Mutator family	NA|355aa|up_8|NZ_CP040235.1_1456039_1457104_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|319aa|up_7|NZ_CP040235.1_1457328_1458285_+	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR	NA|315aa|up_6|NZ_CP040235.1_1458409_1459354_+	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR	NA|107aa|up_5|NZ_CP040235.1_1459619_1459940_-	NA	NA|270aa|up_4|NZ_CP040235.1_1459939_1460749_-	PRK09652, PRK09652, RNA polymerase sigma factor RpoE; Provisional	NA|518aa|up_3|NZ_CP040235.1_1460866_1462420_+	PRK00139, murE, UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase; Provisional	NA|332aa|up_2|NZ_CP040235.1_1462541_1463537_+	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|1226aa|up_1|NZ_CP040235.1_1463655_1467333_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type	NA|530aa|up_0|NZ_CP040235.1_1467393_1468983_-	COG0285, FolC, Folylpolyglutamate synthase [Coenzyme metabolism]	NA|327aa|down_0|NZ_CP040235.1_1470108_1471089_+	NA	NA|534aa|down_1|NZ_CP040235.1_1471392_1472994_+	cd01087, Prolidase, Prolidase	NA|174aa|down_2|NZ_CP040235.1_1473125_1473647_+	cd04676, Nudix_Hydrolase_17, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|570aa|down_3|NZ_CP040235.1_1473696_1475406_-	COG1123, COG1123, ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]	NA|390aa|down_4|NZ_CP040235.1_1475409_1476579_-	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|364aa|down_5|NZ_CP040235.1_1476580_1477672_-	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|545aa|down_6|NZ_CP040235.1_1477839_1479474_-	cd08519, PBP2_NikA_DppA_OppA_like_20, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|428aa|down_7|NZ_CP040235.1_1479753_1481037_-	cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate	NA|271aa|down_8|NZ_CP040235.1_1481092_1481905_-	PRK00443, nagB, glucosamine-6-phosphate deaminase; Provisional	NA|375aa|down_9|NZ_CP040235.1_1482242_1483367_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	5	1848866-1850828	5,1,1,2	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	WYL,cas2,cas1,cas9	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Type II-A,Type II-C,,Type II-B	GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTG,GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTG,GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTG,GCTGGGAATTAGCATTCACCCTTCTTGATAAGCTTG	36,36,36,36	0	0	NA	NA	NA:NA:NA:NA	30,30,11,11	30	,TypeII-A,TypeII-C,TypeII-B	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA|97aa|up_0|NZ_CP040235.1_1848554_1848845_-,NA	NA|1395aa|up_9|NZ_CP040235.1_1832879_1837064_-	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair]	WYL|362aa|up_8|NZ_CP040235.1_1837141_1838227_+	pfam13280, WYL, WYL domain	NA|340aa|up_7|NZ_CP040235.1_1838460_1839480_+	TIGR03535, DapD_actino, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA|431aa|up_6|NZ_CP040235.1_1839693_1840986_-	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like	NA|261aa|up_5|NZ_CP040235.1_1841259_1842042_-	cd01086, MetAP1, Methionine Aminopeptidase 1	NA|327aa|up_4|NZ_CP040235.1_1842231_1843212_-	COG3247, HdeD, Uncharacterized conserved protein [Function unknown]	NA|746aa|up_3|NZ_CP040235.1_1843325_1845563_+	COG3590, PepO, Predicted metalloendopeptidase [Posttranslational modification, protein turnover, chaperones]	NA|246aa|up_2|NZ_CP040235.1_1845645_1846383_-	cd04496, SSB_OBF, SSB_OBF: A subfamily of OB folds similar to the OB fold of ssDNA-binding protein (SSB)	NA|598aa|up_1|NZ_CP040235.1_1846658_1848452_-	PRK09194, PRK09194, prolyl-tRNA synthetase; Provisional	NA|97aa|up_0|NZ_CP040235.1_1848554_1848845_-	NA	cas2|111aa|down_0|NZ_CP040235.1_1850878_1851211_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|302aa|down_1|NZ_CP040235.1_1851207_1852113_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1139aa|down_2|NZ_CP040235.1_1852116_1855533_-	pfam18470, Cas9_a, Cas9 alpha-helical lobe domain	NA|473aa|down_3|NZ_CP040235.1_1855766_1857185_-	cd18037, DEXSc_Pif1_like, DEAD-box helicase domain of Pif1	NA|217aa|down_4|NZ_CP040235.1_1857233_1857884_-	PRK05359, PRK05359, oligoribonuclease; Provisional	NA|518aa|down_5|NZ_CP040235.1_1858051_1859605_-	pfam00478, IMPDH, IMP dehydrogenase / GMP reductase domain	NA|428aa|down_6|NZ_CP040235.1_1859657_1860941_-	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins	NA|225aa|down_7|NZ_CP040235.1_1860937_1861612_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|226aa|down_8|NZ_CP040235.1_1861786_1862464_+	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|235aa|down_9|NZ_CP040235.1_1862595_1863300_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	6	1992213-1992298	6	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Orphan	GGCCCTGAGCGTGCGGGCGCGGA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA|116aa|up_8|NZ_CP040235.1_1981982_1982330_+,NA|30aa|up_5|NZ_CP040235.1_1984300_1984390_-,NA|193aa|up_4|NZ_CP040235.1_1984581_1985160_-,NA|274aa|down_1|NZ_CP040235.1_1994285_1995107_+,NA|104aa|down_6|NZ_CP040235.1_2002256_2002568_+	NA|545aa|up_9|NZ_CP040235.1_1980161_1981796_+	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|116aa|up_8|NZ_CP040235.1_1981982_1982330_+	NA	NA|329aa|up_7|NZ_CP040235.1_1982332_1983319_+	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|233aa|up_6|NZ_CP040235.1_1983449_1984148_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|30aa|up_5|NZ_CP040235.1_1984300_1984390_-	NA	NA|193aa|up_4|NZ_CP040235.1_1984581_1985160_-	NA	NA|513aa|up_3|NZ_CP040235.1_1985341_1986880_+	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|375aa|up_2|NZ_CP040235.1_1986894_1988019_-	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|388aa|up_1|NZ_CP040235.1_1988116_1989280_-	PRK03287, truB, tRNA pseudouridine synthase B; Provisional	NA|158aa|up_0|NZ_CP040235.1_1989281_1989755_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|356aa|down_0|NZ_CP040235.1_1993103_1994171_-	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|274aa|down_1|NZ_CP040235.1_1994285_1995107_+	NA	NA|348aa|down_2|NZ_CP040235.1_1995147_1996191_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|523aa|down_3|NZ_CP040235.1_1996723_1998292_-	COG3534, AbfA, Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism]	NA|267aa|down_4|NZ_CP040235.1_1999101_1999902_-	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|727aa|down_5|NZ_CP040235.1_2000108_2002289_-	pfam14403, CP_ATPgrasp_2, Circularly permuted ATP-grasp type 2	NA|104aa|down_6|NZ_CP040235.1_2002256_2002568_+	NA	NA|304aa|down_7|NZ_CP040235.1_2002564_2003476_+	cd02570, PseudoU_synth_EcTruA, Eukaryotic and bacterial pseudouridine synthases similar to E	NA|181aa|down_8|NZ_CP040235.1_2003557_2004100_-	PRK05591, rplQ, 50S ribosomal protein L17; Validated	NA|332aa|down_9|NZ_CP040235.1_2004199_2005195_-	PRK05182, PRK05182, DNA-directed RNA polymerase subunit alpha; Provisional
GCF_005406285.1_ASM540628v1	NZ_CP040235	Bifidobacterium longum strain ZJ1 chromosome, complete genome	7	2130041-2130114	7	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	Orphan	AAATGACGAACCGGGACAGCGAA	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh,cas2,cas1,cas9,casR	NA|71aa|up_1|NZ_CP040235.1_2128551_2128764_+,NA|59aa|up_0|NZ_CP040235.1_2129021_2129198_+,NA	NA|378aa|up_9|NZ_CP040235.1_2116593_2117727_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|564aa|up_8|NZ_CP040235.1_2117727_2119419_-	PRK12296, obgE, GTPase CgtA; Reviewed	NA|83aa|up_7|NZ_CP040235.1_2119487_2119736_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|103aa|up_6|NZ_CP040235.1_2119758_2120067_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|1015aa|up_5|NZ_CP040235.1_2120218_2123263_-	TIGR00757, Ribonuclease_E/G-like_protein, ribonuclease, Rne/Rng family	NA|425aa|up_4|NZ_CP040235.1_2123599_2124874_-	cd05647, M20_DapE_actinobac, M20 Peptidase actinobacterial DapE encoded N-succinyl-L,L-diaminopimelic acid desuccinylase	NA|483aa|up_3|NZ_CP040235.1_2126032_2127481_-	COG3127, COG3127, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|358aa|up_2|NZ_CP040235.1_2127477_2128551_-	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|71aa|up_1|NZ_CP040235.1_2128551_2128764_+	NA	NA|59aa|up_0|NZ_CP040235.1_2129021_2129198_+	NA	NA|485aa|down_0|NZ_CP040235.1_2130193_2131648_-	PRK00148, PRK00148, Maf-like protein; Reviewed	NA|371aa|down_1|NZ_CP040235.1_2131783_2132896_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|439aa|down_2|NZ_CP040235.1_2132990_2134307_-	PRK06349, PRK06349, homoserine dehydrogenase; Provisional	NA|531aa|down_3|NZ_CP040235.1_2134467_2136060_-	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase	NA|621aa|down_4|NZ_CP040235.1_2136062_2137925_-	COG0018, ArgS, Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	NA|222aa|down_5|NZ_CP040235.1_2138138_2138804_+	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|422aa|down_6|NZ_CP040235.1_2138812_2140078_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|311aa|down_7|NZ_CP040235.1_2140164_2141097_+	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|418aa|down_8|NZ_CP040235.1_2141190_2142444_+	COG1168, MalY, Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]	NA|442aa|down_9|NZ_CP040235.1_2142489_2143815_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated
