assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_004683865.2_ASM468386v2	NZ_CP040759	Paracoccus sp. 2251 plasmid unnamed8, complete sequence	1	18948-19049	1	CRISPRCasFinder	no	cas3,csc1gr5,csc2gr7,cas10d	cas3,csc1gr5,csc2gr7,cas10d	Type I-D	CTCCTAACCCCTCGTGGGGAACGGG	25	0	0	NA	NA	NA	1	1	TypeI-D	cas3,csa3,DEDDh,csc1gr5,csc2gr7,cas10d	NA|74aa|up_9|NZ_CP040759.1_9508_9730_+,NA|69aa|up_8|NZ_CP040759.1_10544_10751_+,NA|165aa|up_7|NZ_CP040759.1_11326_11821_+,csc1gr5|229aa|down_6|NZ_CP040759.1_27381_28068_-,cas10d|971aa|down_8|NZ_CP040759.1_29077_31990_-	NA|74aa|up_9|NZ_CP040759.1_9508_9730_+	NA	NA|69aa|up_8|NZ_CP040759.1_10544_10751_+	NA	NA|165aa|up_7|NZ_CP040759.1_11326_11821_+	NA	NA|325aa|up_6|NZ_CP040759.1_12256_13231_-	cd16433, CheB, Chemotaxis response regulator protein-glutamate methylesterase, CheB	NA|127aa|up_5|NZ_CP040759.1_13274_13655_-	cd17586, REC_PFxFATGY, phosphoacceptor receiver (REC) domain of PFxFATGY motif single-domain (stand-alone) response regulators	NA|603aa|up_4|NZ_CP040759.1_13655_15464_-	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|553aa|up_3|NZ_CP040759.1_15508_17167_-	cd16434, CheB-CheR_fusion, Chemotaxis response regulator protein-glutamate methylesterase, CheB, fused with CheR domain	NA|81aa|up_2|NZ_CP040759.1_17719_17962_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|106aa|up_1|NZ_CP040759.1_17951_18269_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|181aa|up_0|NZ_CP040759.1_18265_18808_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|519aa|down_0|NZ_CP040759.1_19088_20645_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|65aa|down_1|NZ_CP040759.1_20699_20894_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|424aa|down_2|NZ_CP040759.1_20939_22211_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|63aa|down_3|NZ_CP040759.1_22273_22462_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|130aa|down_4|NZ_CP040759.1_22458_22848_-	pfam01527, HTH_Tnp_1, Transposase	cas3|678aa|down_5|NZ_CP040759.1_25355_27389_-	smart00487, DEXDc, DEAD-like helicases superfamily	csc1gr5|229aa|down_6|NZ_CP040759.1_27381_28068_-	NA	csc2gr7|334aa|down_7|NZ_CP040759.1_28067_29069_-	cd09709, Csc2_I-D, CRISPR/Cas system-associated protein Csc2	cas10d|971aa|down_8|NZ_CP040759.1_29077_31990_-	NA	NA|235aa|down_9|NZ_CP040759.1_32001_32706_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6
GCF_004683865.2_ASM468386v2	NZ_CP040759	Paracoccus sp. 2251 plasmid unnamed8, complete sequence	2	22971-25271	1,2,3,1	CRT,CRISPRCasFinder,CRISPRCasFinder,PILER-CR	no	cas3,csc1gr5,csc2gr7,cas10d	cas3,csc1gr5,csc2gr7,cas10d	Type I-D	NCTCCTAACCCCTCATGGGGAACG,CTCCTAACCCCTCATGGGGAACGAGGAC,CTCCTAACCCCTCATGGGGAACGAGGAC,CTCCTAACCCCTCATGGGGAAC	24,28,28,22	0	0	NA	NA	NA:NA:NA:NA	35,32,32,7	35	TypeI-D	cas3,csa3,DEDDh,csc1gr5,csc2gr7,cas10d	NA,csc1gr5|229aa|down_1|NZ_CP040759.1_27381_28068_-,cas10d|971aa|down_3|NZ_CP040759.1_29077_31990_-,NA|114aa|down_8|NZ_CP040759.1_36164_36506_-	NA|603aa|up_9|NZ_CP040759.1_13655_15464_-	COG3920, COG3920, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|553aa|up_8|NZ_CP040759.1_15508_17167_-	cd16434, CheB-CheR_fusion, Chemotaxis response regulator protein-glutamate methylesterase, CheB, fused with CheR domain	NA|81aa|up_7|NZ_CP040759.1_17719_17962_+	COG3609, COG3609, Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain [Transcription]	NA|106aa|up_6|NZ_CP040759.1_17951_18269_+	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|181aa|up_5|NZ_CP040759.1_18265_18808_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|519aa|up_4|NZ_CP040759.1_19088_20645_-	pfam03050, DDE_Tnp_IS66, Transposase IS66 family	NA|65aa|up_3|NZ_CP040759.1_20699_20894_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|424aa|up_2|NZ_CP040759.1_20939_22211_-	pfam00872, Transposase_mut, Transposase, Mutator family	NA|63aa|up_1|NZ_CP040759.1_22273_22462_-	pfam05717, TnpB_IS66, IS66 Orf2 like protein	NA|130aa|up_0|NZ_CP040759.1_22458_22848_-	pfam01527, HTH_Tnp_1, Transposase	cas3|678aa|down_0|NZ_CP040759.1_25355_27389_-	smart00487, DEXDc, DEAD-like helicases superfamily	csc1gr5|229aa|down_1|NZ_CP040759.1_27381_28068_-	NA	csc2gr7|334aa|down_2|NZ_CP040759.1_28067_29069_-	cd09709, Csc2_I-D, CRISPR/Cas system-associated protein Csc2	cas10d|971aa|down_3|NZ_CP040759.1_29077_31990_-	NA	NA|235aa|down_4|NZ_CP040759.1_32001_32706_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|320aa|down_5|NZ_CP040759.1_32786_33746_+	pfam13280, WYL, WYL domain	NA|451aa|down_6|NZ_CP040759.1_34161_35514_+	pfam05598, DUF772, Transposase domain (DUF772)	NA|198aa|down_7|NZ_CP040759.1_35634_36228_-	pfam07929, PRiA4_ORF3, Plasmid pRiA4b ORF-3-like protein	NA|114aa|down_8|NZ_CP040759.1_36164_36506_-	NA	NA|202aa|down_9|NZ_CP040759.1_39206_39812_+	pfam13358, DDE_3, DDE superfamily endonuclease
GCF_004683865.2_ASM468386v2	NZ_CP040758	Paracoccus sp. 2251 plasmid unnamed7, complete sequence	1	55130-55250	1	CRISPRCasFinder	no			Orphan	ACCTCGCCCCAAAAGTCACCATGC	24	0	0	NA	NA	NA	2	2	Orphan	cas3,csa3,DEDDh,csc1gr5,csc2gr7,cas10d	NA|195aa|up_5|NZ_CP040758.1_50315_50900_+,NA|128aa|up_4|NZ_CP040758.1_51354_51738_-,NA|92aa|up_2|NZ_CP040758.1_53166_53442_-,NA|460aa|down_3|NZ_CP040758.1_59729_61109_+,NA|185aa|down_5|NZ_CP040758.1_63765_64320_+,NA|527aa|down_6|NZ_CP040758.1_64340_65921_+,NA|501aa|down_9|NZ_CP040758.1_68247_69750_+	NA|265aa|up_9|NZ_CP040758.1_44984_45779_-	PRK14235, PRK14235, phosphate transporter ATP-binding protein; Provisional	NA|454aa|up_8|NZ_CP040758.1_45789_47151_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|487aa|up_7|NZ_CP040758.1_47147_48608_-	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|349aa|up_6|NZ_CP040758.1_48671_49718_-	cd13654, PBP2_phosphate_like_2, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily	NA|195aa|up_5|NZ_CP040758.1_50315_50900_+	NA	NA|128aa|up_4|NZ_CP040758.1_51354_51738_-	NA	NA|294aa|up_3|NZ_CP040758.1_52109_52991_+	cd03768, SR_ResInv, Serine Recombinase (SR) family, Resolvase and Invertase subfamily, catalytic domain; members contain a C-terminal DNA binding domain	NA|92aa|up_2|NZ_CP040758.1_53166_53442_-	NA	NA|209aa|up_1|NZ_CP040758.1_53512_54139_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]	NA|280aa|up_0|NZ_CP040758.1_54196_55036_-	pfam01051, Rep_3, Initiator Replication protein	NA|129aa|down_0|NZ_CP040758.1_55614_56001_-	pfam13586, DDE_Tnp_1_2, Transposase DDE domain	NA|343aa|down_1|NZ_CP040758.1_56114_57143_+	COG3547, COG3547, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|131aa|down_2|NZ_CP040758.1_57358_57751_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|460aa|down_3|NZ_CP040758.1_59729_61109_+	NA	NA|881aa|down_4|NZ_CP040758.1_61111_63754_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|185aa|down_5|NZ_CP040758.1_63765_64320_+	NA	NA|527aa|down_6|NZ_CP040758.1_64340_65921_+	NA	NA|436aa|down_7|NZ_CP040758.1_65917_67225_+	cd03823, GT4_ExpE7-like, glycosyltransferase ExpE7 and similar proteins	NA|281aa|down_8|NZ_CP040758.1_67405_68248_+	pfam13704, Glyco_tranf_2_4, Glycosyl transferase family 2	NA|501aa|down_9|NZ_CP040758.1_68247_69750_+	NA
