assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	1	489099-489196	1	CRISPRCasFinder	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	GGGGATCCGGCGGGCGGCCGGGG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA|222aa|up_1|NZ_CP048407.1_486084_486750_+,NA	NA|451aa|up_9|NZ_CP048407.1_473392_474745_-	cd03877, M28_like, M28 Zn-peptidase, many containing a protease-associated (PA) domain insert	NA|575aa|up_8|NZ_CP048407.1_474843_476568_-	COG0400, COG0400, Predicted esterase [General function prediction only]	NA|383aa|up_7|NZ_CP048407.1_476826_477975_-	PRK06851, PRK06851, hypothetical protein; Provisional	NA|204aa|up_6|NZ_CP048407.1_478290_478902_+	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|440aa|up_5|NZ_CP048407.1_478882_480202_+	COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism]	NA|135aa|up_4|NZ_CP048407.1_480457_480862_-	pfam02643, DUF192, Uncharacterized ACR, COG1430	NA|804aa|up_3|NZ_CP048407.1_481766_484178_+	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|420aa|up_2|NZ_CP048407.1_484319_485579_+	cd06438, EpsO_like, EpsO protein participates in the methanolan synthesis	NA|222aa|up_1|NZ_CP048407.1_486084_486750_+	NA	NA|746aa|up_0|NZ_CP048407.1_486858_489096_+	cd03251, ABCC_MsbA, ATP-binding cassette domain of the bacterial lipid flippase and related proteins, subfamily C	NA|157aa|down_0|NZ_CP048407.1_489819_490290_+	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|286aa|down_1|NZ_CP048407.1_490763_491621_+	PRK12857, PRK12857, class II fructose-1,6-bisphosphate aldolase	NA|329aa|down_2|NZ_CP048407.1_491867_492854_+	PRK09479, glpX, fructose 1,6-bisphosphatase II; Reviewed	NA|188aa|down_3|NZ_CP048407.1_493095_493659_+	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|293aa|down_4|NZ_CP048407.1_493664_494543_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|343aa|down_5|NZ_CP048407.1_494523_495552_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|336aa|down_6|NZ_CP048407.1_495742_496750_+	pfam10670, DUF4198, Domain of unknown function (DUF4198)	NA|153aa|down_7|NZ_CP048407.1_496974_497433_+	pfam04234, CopC, CopC domain	NA|179aa|down_8|NZ_CP048407.1_497469_498006_+	cd03134, GATase1_PfpI_like, A type 1 glutamine amidotransferase (GATase1)-like domain found in PfpI from Pyrococcus furiosus	NA|339aa|down_9|NZ_CP048407.1_498465_499482_+	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	2	797802-797903	2	CRISPRCasFinder	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	GTGACAACGAACAAACCGGTCAGGCCGT	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA|153aa|up_9|NZ_CP048407.1_785793_786252_+,NA|457aa|up_7|NZ_CP048407.1_787316_788687_+,NA|288aa|up_5|NZ_CP048407.1_790792_791656_+,NA|76aa|up_2|NZ_CP048407.1_794910_795138_+,NA|194aa|down_2|NZ_CP048407.1_799057_799639_+	NA|153aa|up_9|NZ_CP048407.1_785793_786252_+	NA	NA|207aa|up_8|NZ_CP048407.1_786429_787050_+	COG4795, PulJ, Type II secretory pathway, component PulJ [Intracellular trafficking and secretion]	NA|457aa|up_7|NZ_CP048407.1_787316_788687_+	NA	NA|220aa|up_6|NZ_CP048407.1_790149_790809_+	TIGR01709, Type_II_secretion_system_protein_L, type II secretion system protein L	NA|288aa|up_5|NZ_CP048407.1_790792_791656_+	NA	NA|377aa|up_4|NZ_CP048407.1_792476_793607_+	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|318aa|up_3|NZ_CP048407.1_793782_794736_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|76aa|up_2|NZ_CP048407.1_794910_795138_+	NA	NA|338aa|up_1|NZ_CP048407.1_795156_796170_+	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|446aa|up_0|NZ_CP048407.1_796226_797564_-	PRK07476, eutB, threonine dehydratase; Provisional	NA|139aa|down_0|NZ_CP048407.1_798016_798433_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|133aa|down_1|NZ_CP048407.1_798702_799101_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|194aa|down_2|NZ_CP048407.1_799057_799639_+	NA	NA|126aa|down_3|NZ_CP048407.1_799560_799938_+	COG2445, COG2445, Uncharacterized conserved protein [Function unknown]	NA|422aa|down_4|NZ_CP048407.1_800253_801519_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|282aa|down_5|NZ_CP048407.1_801659_802505_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|274aa|down_6|NZ_CP048407.1_802837_803659_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|584aa|down_7|NZ_CP048407.1_803798_805550_+	cd08514, PBP2_AppA_like, The substrate-binding component of the oligopeptide-binding protein, AppA, from Bacillus subtilis contains the type 2 periplasmic-binding fold	NA|320aa|down_8|NZ_CP048407.1_805770_806730_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|329aa|down_9|NZ_CP048407.1_806742_807729_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	3	799978-800073	3	CRISPRCasFinder	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	CCGCCCCCTTGCTGCGATCCTGAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA|288aa|up_9|NZ_CP048407.1_790792_791656_+,NA|76aa|up_6|NZ_CP048407.1_794910_795138_+,NA|194aa|up_1|NZ_CP048407.1_799057_799639_+,NA	NA|288aa|up_9|NZ_CP048407.1_790792_791656_+	NA	NA|377aa|up_8|NZ_CP048407.1_792476_793607_+	COG0836, {ManC}, Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane]	NA|318aa|up_7|NZ_CP048407.1_793782_794736_+	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]	NA|76aa|up_6|NZ_CP048407.1_794910_795138_+	NA	NA|338aa|up_5|NZ_CP048407.1_795156_796170_+	cd07062, Peptidase_S66_mccF_like, Microcin C7 self-immunity protein determines resistance to exogenous microcin C7	NA|446aa|up_4|NZ_CP048407.1_796226_797564_-	PRK07476, eutB, threonine dehydratase; Provisional	NA|139aa|up_3|NZ_CP048407.1_798016_798433_+	pfam18765, Polbeta, Polymerase beta, Nucleotidyltransferase	NA|133aa|up_2|NZ_CP048407.1_798702_799101_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|194aa|up_1|NZ_CP048407.1_799057_799639_+	NA	NA|126aa|up_0|NZ_CP048407.1_799560_799938_+	COG2445, COG2445, Uncharacterized conserved protein [Function unknown]	NA|422aa|down_0|NZ_CP048407.1_800253_801519_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|282aa|down_1|NZ_CP048407.1_801659_802505_-	TIGR01250, Proline_iminopeptidase, proline-specific peptidase, Bacillus coagulans-type subfamily	NA|274aa|down_2|NZ_CP048407.1_802837_803659_+	COG1414, IclR, Transcriptional regulator [Transcription]	NA|584aa|down_3|NZ_CP048407.1_803798_805550_+	cd08514, PBP2_AppA_like, The substrate-binding component of the oligopeptide-binding protein, AppA, from Bacillus subtilis contains the type 2 periplasmic-binding fold	NA|320aa|down_4|NZ_CP048407.1_805770_806730_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|329aa|down_5|NZ_CP048407.1_806742_807729_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|318aa|down_6|NZ_CP048407.1_809441_810395_+	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional	NA|544aa|down_7|NZ_CP048407.1_810759_812391_-	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|286aa|down_8|NZ_CP048407.1_812834_813692_+	PRK09109, motC, flagellar motor protein; Reviewed	NA|348aa|down_9|NZ_CP048407.1_813691_814735_+	PRK09038, PRK09038, flagellar motor protein MotD; Reviewed
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	4	1855945-1856247	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3HD,cas5,cas7b,cas8b1,cas6,WYL	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Type I-B	GTTTGTAGGGTACCTATGACTCGGGTTTGAC,GTTTGTAGGGTACCTATGACTCGGGTTTGAC,GTTTGTAGGGTACCTATGACTCGGGTTTGAC	31,31,31	0	0	NA	NA	NA:NA:NA	4,4,4	4	TypeI-B	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA,cas8b1|701aa|down_6|NZ_CP048407.1_1865083_1867186_-	NA|383aa|up_9|NZ_CP048407.1_1840574_1841723_-	pfam04227, Indigoidine_A, Indigoidine synthase A like protein	NA|449aa|up_8|NZ_CP048407.1_1841719_1843066_-	pfam13478, XdhC_C, XdhC Rossmann domain	NA|296aa|up_7|NZ_CP048407.1_1843368_1844256_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|418aa|up_6|NZ_CP048407.1_1844538_1845792_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|451aa|up_5|NZ_CP048407.1_1845920_1847273_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|368aa|up_4|NZ_CP048407.1_1847508_1848612_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|261aa|up_3|NZ_CP048407.1_1848571_1849354_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|362aa|up_2|NZ_CP048407.1_1849376_1850462_+	cd18610, GH130_BT3780-like, Glycosyl hydrolase family 130, such as beta-mammosidase BT3780 and BACOVA_03624	NA|1020aa|up_1|NZ_CP048407.1_1850477_1853537_+	COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism]	NA|666aa|up_0|NZ_CP048407.1_1853568_1855566_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|408aa|down_0|NZ_CP048407.1_1858740_1859964_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|down_1|NZ_CP048407.1_1859960_1860761_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|399aa|down_2|NZ_CP048407.1_1861168_1862364_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas3HD|290aa|down_3|NZ_CP048407.1_1862385_1863255_-	TIGR01596, CRISPR-associated_endonuclease_Cas3-HD, CRISPR-associated endonuclease Cas3-HD	cas5|238aa|down_4|NZ_CP048407.1_1863325_1864039_-	cd09692, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7b|313aa|down_5|NZ_CP048407.1_1864062_1865001_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|701aa|down_6|NZ_CP048407.1_1865083_1867186_-	NA	cas6|412aa|down_7|NZ_CP048407.1_1867175_1868411_-	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	WYL|333aa|down_8|NZ_CP048407.1_1869219_1870218_-	pfam13280, WYL, WYL domain	NA|546aa|down_9|NZ_CP048407.1_1870594_1872232_-	cd03888, M20_PepV, M20 Peptidase Xaa-His dipeptidase (PepV) degrades hydrophobic dipeptides
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	5	1858088-1858587	5,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas3HD,cas5,cas7b,cas8b1,cas6,WYL	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Type I-B	GTTTGTAGGGTACCTATGAGGGATCGAAAC,GTTTGTAGGGTACCTATGAGGGATCGAAAC,GTTTGTAGGGTACCTATGA---GGGATCGAAAC	30,30,33	0	0	NA	NA	NA:NA:NA	7,7,6	7	TypeI-B	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA,cas8b1|701aa|down_6|NZ_CP048407.1_1865083_1867186_-	NA|383aa|up_9|NZ_CP048407.1_1840574_1841723_-	pfam04227, Indigoidine_A, Indigoidine synthase A like protein	NA|449aa|up_8|NZ_CP048407.1_1841719_1843066_-	pfam13478, XdhC_C, XdhC Rossmann domain	NA|296aa|up_7|NZ_CP048407.1_1843368_1844256_-	COG0714, COG0714, MoxR-like ATPases [General function prediction only]	NA|418aa|up_6|NZ_CP048407.1_1844538_1845792_+	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|451aa|up_5|NZ_CP048407.1_1845920_1847273_+	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold	NA|368aa|up_4|NZ_CP048407.1_1847508_1848612_+	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|261aa|up_3|NZ_CP048407.1_1848571_1849354_+	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|362aa|up_2|NZ_CP048407.1_1849376_1850462_+	cd18610, GH130_BT3780-like, Glycosyl hydrolase family 130, such as beta-mammosidase BT3780 and BACOVA_03624	NA|1020aa|up_1|NZ_CP048407.1_1850477_1853537_+	COG3934, COG3934, Endo-beta-mannanase [Carbohydrate transport and metabolism]	NA|666aa|up_0|NZ_CP048407.1_1853568_1855566_-	COG3552, CoxE, Protein containing von Willebrand factor type A (vWA) domain [General function prediction only]	NA|408aa|down_0|NZ_CP048407.1_1858740_1859964_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|267aa|down_1|NZ_CP048407.1_1859960_1860761_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|399aa|down_2|NZ_CP048407.1_1861168_1862364_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas3HD|290aa|down_3|NZ_CP048407.1_1862385_1863255_-	TIGR01596, CRISPR-associated_endonuclease_Cas3-HD, CRISPR-associated endonuclease Cas3-HD	cas5|238aa|down_4|NZ_CP048407.1_1863325_1864039_-	cd09692, Cas5_I-B, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7b|313aa|down_5|NZ_CP048407.1_1864062_1865001_-	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas8b1|701aa|down_6|NZ_CP048407.1_1865083_1867186_-	NA	cas6|412aa|down_7|NZ_CP048407.1_1867175_1868411_-	COG1583, COG1583, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]	WYL|333aa|down_8|NZ_CP048407.1_1869219_1870218_-	pfam13280, WYL, WYL domain	NA|546aa|down_9|NZ_CP048407.1_1870594_1872232_-	cd03888, M20_PepV, M20 Peptidase Xaa-His dipeptidase (PepV) degrades hydrophobic dipeptides
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	6	1943082-1943177	6	CRISPRCasFinder	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	CCGCCCAAGCCGGCGGGTCCCGCAA	25	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA|39aa|up_6|NZ_CP048407.1_1932296_1932413_+,NA|129aa|up_5|NZ_CP048407.1_1932409_1932796_-,NA	NA|336aa|up_9|NZ_CP048407.1_1928980_1929988_+	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|316aa|up_8|NZ_CP048407.1_1930207_1931155_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|252aa|up_7|NZ_CP048407.1_1931360_1932116_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein	NA|39aa|up_6|NZ_CP048407.1_1932296_1932413_+	NA	NA|129aa|up_5|NZ_CP048407.1_1932409_1932796_-	NA	NA|140aa|up_4|NZ_CP048407.1_1933091_1933511_-	pfam02913, FAD-oxidase_C, FAD linked oxidases, C-terminal domain	NA|475aa|up_3|NZ_CP048407.1_1933722_1935147_-	COG1823, COG1823, Predicted Na+/dicarboxylate symporter [General function prediction only]	NA|279aa|up_2|NZ_CP048407.1_1935412_1936249_-	PRK07396, PRK07396, dihydroxynaphthoic acid synthetase; Validated	NA|1546aa|up_1|NZ_CP048407.1_1936443_1941081_-	TIGR03695, menH_SHCHC, 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase	NA|610aa|up_0|NZ_CP048407.1_1941073_1942903_-	COG1169, MenF, Isochorismate synthase [Coenzyme metabolism / Secondary metabolites biosynthesis, transport, and catabolism]	NA|399aa|down_0|NZ_CP048407.1_1943190_1944387_-	cd13962, PT_UbiA_UBIAD1, 1,4-Dihydroxy-2-naphthoate octaprenyltransferase	NA|729aa|down_1|NZ_CP048407.1_1945159_1947346_+	PRK08645, PRK08645, bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed	NA|404aa|down_2|NZ_CP048407.1_1947413_1948625_+	pfam01053, Cys_Met_Meta_PP, Cys/Met metabolism PLP-dependent enzyme	NA|300aa|down_3|NZ_CP048407.1_1948776_1949676_-	cd05830, Sortase_E, Sortase domain found in the class E family of sortases	NA|488aa|down_4|NZ_CP048407.1_1949717_1951181_-	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain	NA|843aa|down_5|NZ_CP048407.1_1951485_1954014_-	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional	NA|206aa|down_6|NZ_CP048407.1_1954747_1955365_+	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)	NA|224aa|down_7|NZ_CP048407.1_1955544_1956216_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|191aa|down_8|NZ_CP048407.1_1956212_1956785_+	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|596aa|down_9|NZ_CP048407.1_1956940_1958728_-	COG0578, GlpA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	7	2464923-2464993	7	CRISPRCasFinder	no	csa3	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Type I-A	CGGTGGCACCGGGTGCGGTCCCC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA|277aa|up_9|NZ_CP048407.1_2454068_2454899_-,NA|147aa|up_8|NZ_CP048407.1_2455082_2455523_+,NA|159aa|up_0|NZ_CP048407.1_2461745_2462222_-,NA|67aa|down_4|NZ_CP048407.1_2476079_2476280_+	NA|277aa|up_9|NZ_CP048407.1_2454068_2454899_-	NA	NA|147aa|up_8|NZ_CP048407.1_2455082_2455523_+	NA	NA|256aa|up_7|NZ_CP048407.1_2455699_2456467_+	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region	NA|107aa|up_6|NZ_CP048407.1_2456834_2457155_-	pfam00269, SASP, Small, acid-soluble spore proteins, alpha/beta type	NA|106aa|up_5|NZ_CP048407.1_2457527_2457845_-	pfam11146, DUF2905, Protein of unknown function (DUF2905)	NA|304aa|up_4|NZ_CP048407.1_2458341_2459253_+	cd09989, Arginase, Arginase family	NA|82aa|up_3|NZ_CP048407.1_2459488_2459734_+	pfam10262, Rdx, Rdx family	NA|449aa|up_2|NZ_CP048407.1_2459826_2461173_-	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|175aa|up_1|NZ_CP048407.1_2461171_2461696_+	TIGR02227, Inactive_signal_peptidase_IA	NA|159aa|up_0|NZ_CP048407.1_2461745_2462222_-	NA	NA|739aa|down_0|NZ_CP048407.1_2466365_2468582_+	pfam05547, Peptidase_M6, Immune inhibitor A peptidase M6	NA|464aa|down_1|NZ_CP048407.1_2469391_2470783_+	COG3594, NolL, Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]	NA|322aa|down_2|NZ_CP048407.1_2470818_2471784_-	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|567aa|down_3|NZ_CP048407.1_2474294_2475995_-	cd09279, RNase_HI_like, RNAse HI family that includes archaeal, some bacterial as well as plant RNase HI	NA|67aa|down_4|NZ_CP048407.1_2476079_2476280_+	NA	NA|305aa|down_5|NZ_CP048407.1_2476325_2477240_+	cd01993, Alpha_ANH_like_II, This is a subfamily of Adenine nucleotide alpha hydrolases superfamily	NA|69aa|down_6|NZ_CP048407.1_2477499_2477706_+	pfam07295, DUF1451, Zinc-ribbon containing domain	NA|265aa|down_7|NZ_CP048407.1_2478085_2478880_+	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase	NA|300aa|down_8|NZ_CP048407.1_2479059_2479959_-	PRK01060, PRK01060, endonuclease IV; Provisional	NA|781aa|down_9|NZ_CP048407.1_2480033_2482376_-	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	8	2553715-2554669	3,8,3	PILER-CR,CRISPRCasFinder,CRT	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	GTTTGTAGGGTGCCTATGA---GGAATCGAAAC,GTTTGTAGGGTGCCTATGAGGAATCGAAAC,GTTTGTAGGGTGCCTATGAGGAATCGAAAC	33,30,30	0	0	NA	NA	NA:NA:NA	12,13,14	14	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA,NA	NA|401aa|up_9|NZ_CP048407.1_2541267_2542470_-	PRK05790, PRK05790, putative acyltransferase; Provisional	NA|674aa|up_8|NZ_CP048407.1_2542501_2544523_-	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated	NA|266aa|up_7|NZ_CP048407.1_2544700_2545498_-	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional	NA|217aa|up_6|NZ_CP048407.1_2545610_2546261_-	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit	NA|300aa|up_5|NZ_CP048407.1_2546552_2547452_-	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein	NA|237aa|up_4|NZ_CP048407.1_2547448_2548159_-	pfam06243, PaaB, Phenylacetic acid degradation B	NA|322aa|up_3|NZ_CP048407.1_2548198_2549164_-	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional	NA|195aa|up_2|NZ_CP048407.1_2549635_2550220_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|311aa|up_1|NZ_CP048407.1_2550683_2551616_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|374aa|up_0|NZ_CP048407.1_2552103_2553225_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|539aa|down_0|NZ_CP048407.1_2554826_2556443_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|260aa|down_1|NZ_CP048407.1_2559055_2559835_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|405aa|down_2|NZ_CP048407.1_2559831_2561046_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|377aa|down_3|NZ_CP048407.1_2561150_2562281_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|256aa|down_4|NZ_CP048407.1_2563780_2564548_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|349aa|down_5|NZ_CP048407.1_2564593_2565640_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|256aa|down_6|NZ_CP048407.1_2565636_2566404_-	pfam04238, DUF420, Protein of unknown function (DUF420)	NA|448aa|down_7|NZ_CP048407.1_2566452_2567796_-	cd17532, REC_LytTR_AlgR-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AlgR	NA|380aa|down_8|NZ_CP048407.1_2567811_2568951_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|301aa|down_9|NZ_CP048407.1_2569311_2570214_+	PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	9	2556510-2558932	9,4,4	CRISPRCasFinder,CRT,PILER-CR	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	GTTTGTAGGGTGCCTATGAGGAATCGAAAC,GTTTGTAGGGTGCCTATGAGGAATCGAAAC,GTTTGTAGGGTGCCTATGA---GGAATCGAAAC	30,30,33	0	0	NA	NA	NA:NA:NA	36,36,35	36	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA,NA	NA|674aa|up_9|NZ_CP048407.1_2542501_2544523_-	PRK08268, PRK08268, 3-hydroxy-acyl-CoA dehydrogenase; Validated	NA|266aa|up_8|NZ_CP048407.1_2544700_2545498_-	PRK08140, PRK08140, enoyl-CoA hydratase; Provisional	NA|217aa|up_7|NZ_CP048407.1_2545610_2546261_-	TIGR02159, Putative_12-phenylacetyl-CoA_epoxidase_subunit_D, phenylacetate-CoA oxygenase, PaaJ subunit	NA|300aa|up_6|NZ_CP048407.1_2546552_2547452_-	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein	NA|237aa|up_5|NZ_CP048407.1_2547448_2548159_-	pfam06243, PaaB, Phenylacetic acid degradation B	NA|322aa|up_4|NZ_CP048407.1_2548198_2549164_-	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional	NA|195aa|up_3|NZ_CP048407.1_2549635_2550220_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|311aa|up_2|NZ_CP048407.1_2550683_2551616_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|374aa|up_1|NZ_CP048407.1_2552103_2553225_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|539aa|up_0|NZ_CP048407.1_2554826_2556443_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|260aa|down_0|NZ_CP048407.1_2559055_2559835_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|405aa|down_1|NZ_CP048407.1_2559831_2561046_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|377aa|down_2|NZ_CP048407.1_2561150_2562281_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|256aa|down_3|NZ_CP048407.1_2563780_2564548_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|349aa|down_4|NZ_CP048407.1_2564593_2565640_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|256aa|down_5|NZ_CP048407.1_2565636_2566404_-	pfam04238, DUF420, Protein of unknown function (DUF420)	NA|448aa|down_6|NZ_CP048407.1_2566452_2567796_-	cd17532, REC_LytTR_AlgR-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AlgR	NA|380aa|down_7|NZ_CP048407.1_2567811_2568951_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|301aa|down_8|NZ_CP048407.1_2569311_2570214_+	PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed	NA|468aa|down_9|NZ_CP048407.1_2570327_2571731_-	cd12822, TmCorA-like, Thermotoga maritima CorA-like family
GCF_003403315.2_ASM340331v2	NZ_CP048407	Thermaerobacter sp. PB12/4term chromosome, complete genome	10	2562589-2563681	5,5,10	CRT,PILER-CR,CRISPRCasFinder	no		cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	Orphan	GTTTGTAGGGTGCCTATGAGGAATCGAAAC,GTTTGTAGGGTGCCTATGA---GGAATCGAAAC,GTTTGTAGGGTGCCTATGAGGAATCGAAAC	30,33,30	0	0	NA	NA	NA:NA:NA	16,15,15	16	Orphan	cas3,csa3,DinG,cas3HD,cas5,cas7b,cas8b1,cas6,WYL	NA,NA|168aa|down_8|NZ_CP048407.1_2572388_2572892_-,NA|66aa|down_9|NZ_CP048407.1_2572910_2573108_-	NA|300aa|up_9|NZ_CP048407.1_2546552_2547452_-	pfam05138, PaaA_PaaC, Phenylacetic acid catabolic protein	NA|237aa|up_8|NZ_CP048407.1_2547448_2548159_-	pfam06243, PaaB, Phenylacetic acid degradation B	NA|322aa|up_7|NZ_CP048407.1_2548198_2549164_-	PRK13778, paaA, phenylacetate-CoA oxygenase subunit PaaA; Provisional	NA|195aa|up_6|NZ_CP048407.1_2549635_2550220_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|311aa|up_5|NZ_CP048407.1_2550683_2551616_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|374aa|up_4|NZ_CP048407.1_2552103_2553225_-	COG1748, LYS9, Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]	NA|539aa|up_3|NZ_CP048407.1_2554826_2556443_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|260aa|up_2|NZ_CP048407.1_2559055_2559835_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|405aa|up_1|NZ_CP048407.1_2559831_2561046_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|377aa|up_0|NZ_CP048407.1_2561150_2562281_-	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family	NA|256aa|down_0|NZ_CP048407.1_2563780_2564548_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|349aa|down_1|NZ_CP048407.1_2564593_2565640_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|256aa|down_2|NZ_CP048407.1_2565636_2566404_-	pfam04238, DUF420, Protein of unknown function (DUF420)	NA|448aa|down_3|NZ_CP048407.1_2566452_2567796_-	cd17532, REC_LytTR_AlgR-like, phosphoacceptor receiver (REC) domain of LytTR/AlgR family response regulators similar to AlgR	NA|380aa|down_4|NZ_CP048407.1_2567811_2568951_-	COG3275, LytS, Putative regulator of cell autolysis [Signal transduction mechanisms]	NA|301aa|down_5|NZ_CP048407.1_2569311_2570214_+	PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed	NA|468aa|down_6|NZ_CP048407.1_2570327_2571731_-	cd12822, TmCorA-like, Thermotoga maritima CorA-like family	NA|104aa|down_7|NZ_CP048407.1_2571947_2572259_-	TIGR02118, TIGR02118, conserved hypothetical protein	NA|168aa|down_8|NZ_CP048407.1_2572388_2572892_-	NA	NA|66aa|down_9|NZ_CP048407.1_2572910_2573108_-	NA
