assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003390735.1_ASM339073v1	NZ_CP022723	Bifidobacterium bifidum strain S6 chromosome, complete genome	1	917-1743	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no		csa3,DEDDh,WYL,cas3,cas9,cas1,cas2,csn2	Orphan	GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC,GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC,GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC	36,36,36	1	1	1151-1180	NZ_CP022723.1_1086014-1085985	NA:NA:NA	12,12,11	12	Orphan	csa3,DEDDh,WYL,cas3,cas9,cas1,cas2,csn2	NA,NA|182aa|down_0|NZ_CP022723.1_2829_3375_+	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|182aa|down_0|NZ_CP022723.1_2829_3375_+	NA	NA|308aa|down_1|NZ_CP022723.1_3790_4714_-	pfam12183, NotI, Restriction endonuclease NotI	NA|391aa|down_2|NZ_CP022723.1_4716_5889_-	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|141aa|down_3|NZ_CP022723.1_6269_6692_-	PRK10920, PRK10920, putative uroporphyrinogen III C-methyltransferase; Provisional	NA|83aa|down_4|NZ_CP022723.1_7207_7456_-	TIGR02200, conserved_hypothetical_protein, Glutaredoxin-like protein	NA|186aa|down_5|NZ_CP022723.1_8584_9142_+	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]	NA|85aa|down_6|NZ_CP022723.1_9216_9471_-	TIGR03410, urea_trans_UrtE, urea ABC transporter, ATP-binding protein UrtE	NA|214aa|down_7|NZ_CP022723.1_9636_10278_+	PRK00129, upp, uracil phosphoribosyltransferase; Reviewed	NA|160aa|down_8|NZ_CP022723.1_10509_10989_+	pfam02590, SPOUT_MTase, Predicted SPOUT methyltransferase	NA|1140aa|down_9|NZ_CP022723.1_11005_14425_-	TIGR02168, Chromosome_partition_protein_Smc, chromosome segregation protein SMC, common bacterial type
GCF_003390735.1_ASM339073v1	NZ_CP022723	Bifidobacterium bifidum strain S6 chromosome, complete genome	2	622691-622798	2	CRISPRCasFinder	no		csa3,DEDDh,WYL,cas3,cas9,cas1,cas2,csn2	Orphan	GTGCGTCACGCTGTGCGTCCACGCACACAGTGACG	35	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,WYL,cas3,cas9,cas1,cas2,csn2	NA|187aa|up_9|NZ_CP022723.1_603319_603880_-,NA|325aa|up_4|NZ_CP022723.1_615197_616172_-,NA|210aa|down_2|NZ_CP022723.1_625837_626467_+,NA|30aa|down_3|NZ_CP022723.1_626591_626681_+,NA|67aa|down_9|NZ_CP022723.1_638995_639196_+	NA|187aa|up_9|NZ_CP022723.1_603319_603880_-	NA	NA|1607aa|up_8|NZ_CP022723.1_604305_609126_-	cd06564, GH20_DspB_LnbB-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins	NA|301aa|up_7|NZ_CP022723.1_609397_610300_+	cd02570, PseudoU_synth_EcTruA, Eukaryotic and bacterial pseudouridine synthases similar to E	NA|728aa|up_6|NZ_CP022723.1_610485_612669_+	pfam14403, CP_ATPgrasp_2, Circularly permuted ATP-grasp type 2	NA|267aa|up_5|NZ_CP022723.1_612790_613591_+	COG1305, COG1305, Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]	NA|325aa|up_4|NZ_CP022723.1_615197_616172_-	NA	NA|343aa|up_3|NZ_CP022723.1_616246_617275_+	PRK12327, nusA, transcription elongation factor NusA; Provisional	NA|989aa|up_2|NZ_CP022723.1_617484_620451_+	PRK05306, infB, translation initiation factor IF-2; Validated	NA|195aa|up_1|NZ_CP022723.1_620752_621337_+	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|409aa|up_0|NZ_CP022723.1_621445_622672_+	PRK03287, truB, tRNA pseudouridine synthase B; Provisional	NA|420aa|down_0|NZ_CP022723.1_622950_624210_+	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase	NA|467aa|down_1|NZ_CP022723.1_624351_625752_-	PRK11823, PRK11823, DNA repair protein RadA; Provisional	NA|210aa|down_2|NZ_CP022723.1_625837_626467_+	NA	NA|30aa|down_3|NZ_CP022723.1_626591_626681_+	NA	NA|233aa|down_4|NZ_CP022723.1_626849_627548_-	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|360aa|down_5|NZ_CP022723.1_627697_628777_-	cd09278, RNase_HI_prokaryote_like, RNase HI family found mainly in prokaryotes	NA|1961aa|down_6|NZ_CP022723.1_629007_634890_+	pfam07555, NAGidase, beta-N-acetylglucosaminidase	NA|475aa|down_7|NZ_CP022723.1_635002_636427_-	PRK07251, PRK07251, FAD-containing oxidoreductase	NA|559aa|down_8|NZ_CP022723.1_636807_638484_-	cd05801, PGM_like3, This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily	NA|67aa|down_9|NZ_CP022723.1_638995_639196_+	NA
GCF_003390735.1_ASM339073v1	NZ_CP022723	Bifidobacterium bifidum strain S6 chromosome, complete genome	3	2305825-2309688	2,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas9,cas1,cas2,csn2	csa3,DEDDh,WYL,cas3,cas9,cas1,cas2,csn2	Type II-B,Type II-A,Type II-C	GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC,GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC,GTTTCAGATGCCTGTCAGATCAATGACTTTGACCAC	36,36,36	0	0	NA	NA	NA:NA:NA	57,57,58	58	TypeII-B,TypeII-A,TypeII-C	csa3,DEDDh,WYL,cas3,cas9,cas1,cas2,csn2	NA|115aa|up_7|NZ_CP022723.1_2295354_2295699_+,NA|139aa|up_4|NZ_CP022723.1_2298125_2298542_+,NA	NA|177aa|up_9|NZ_CP022723.1_2294335_2294866_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|96aa|up_8|NZ_CP022723.1_2295070_2295358_+	pfam08681, DUF1778, Protein of unknown function (DUF1778)	NA|115aa|up_7|NZ_CP022723.1_2295354_2295699_+	NA	NA|331aa|up_6|NZ_CP022723.1_2295744_2296737_-	cd19088, AKR_AKR13B1, AKR13B family of aldo-keto reductase (AKR)	NA|149aa|up_5|NZ_CP022723.1_2296972_2297419_-	pfam16403, DUF5011, Domain of unknown function (DUF5011)	NA|139aa|up_4|NZ_CP022723.1_2298125_2298542_+	NA	cas9|1421aa|up_3|NZ_CP022723.1_2299557_2303820_+	pfam16592, Cas9_REC, REC lobe of CRISPR-associated endonuclease Cas9	cas1|297aa|up_2|NZ_CP022723.1_2303951_2304842_+	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas2|102aa|up_1|NZ_CP022723.1_2304832_2305138_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	csn2|221aa|up_0|NZ_CP022723.1_2305134_2305797_+	cd12218, Csn2, CRISPR/Cas system-associated protein Csn2	NA|251aa|down_0|NZ_CP022723.1_2309767_2310520_-	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA	NA|NA	NA
