The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	451072	484330	5518379	capsid,tail,integrase,head,portal,tRNA,protease,terminase	uncultured_Caudovirales_phage(75.0%)	34	468680:468697	484675:484692
WP_002919147.1|451072_452020_-|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
WP_002919144.1|452034_452544_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
WP_002919139.1|452672_453797_+	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_002919137.1|453768_454242_+	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_004145330.1|454267_454810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002919132.1|454814_455387_+	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
WP_002919126.1|455390_456209_+	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_002919125.1|456205_456463_+	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
WP_002919123.1|456438_456993_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
WP_002919103.1|462788_463010_-	membrane protein	NA	NA	NA	NA	NA
WP_002919102.1|463303_466414_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_002919101.1|466426_467566_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_004150972.1|467944_468595_+	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
468680:468697	attL	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
WP_004150971.1|468870_470097_+|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
WP_004150970.1|470189_471131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001547839.1|471312_471597_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_004150969.1|471607_472387_+	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
WP_157263200.1|472889_473108_+	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.4	1.4e-34
WP_001549752.1|473100_473289_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004218267.1|473365_473494_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150966.1|473592_473961_+	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
WP_001549749.1|473957_474323_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150965.1|474322_476458_+	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
WP_004150964.1|476800_477136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150963.1|477184_477697_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001549743.1|477960_479127_+|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
WP_001547826.1|479178_479739_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
WP_004150962.1|479740_480982_+|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
WP_004150961.1|480978_481314_+|head	phage head closure protein	head	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
WP_001547824.1|481310_481610_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
WP_004150959.1|481609_482053_+	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
WP_004150957.1|482045_482198_+	hypothetical protein	NA	A0A2H4JCY9	uncultured_Caudovirales_phage	88.0	2.4e-17
WP_000113647.1|482328_482685_+|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
WP_004150955.1|482668_484330_+|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
484675:484692	attR	GTATCAGTTCATGCCGTA	NA	NA	NA	NA
>prophage 2
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1226321	1275465	5518379	capsid,tail,integrase,transposase,lysis,plate,head,portal,tRNA,coat,terminase	Salmonella_phage(80.0%)	63	1225979:1225995	1252938:1252954
1225979:1225995	attL	CCAGCTGCTGGCGCAGG	NA	NA	NA	NA
WP_000019473.1|1226321_1227302_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_062955148.1|1227347_1228346_-|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
WP_004151019.1|1228348_1228978_-	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
WP_001397669.1|1229100_1229343_+	hypothetical protein	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
WP_004151018.1|1229375_1229885_+	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
WP_004151017.1|1229892_1230093_+	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
WP_004144796.1|1230056_1230395_+	DUF5347 domain-containing protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
WP_004151016.1|1230462_1230696_+	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
WP_004151014.1|1230695_1230923_+	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
WP_004151013.1|1230919_1231771_+	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
WP_004151012.1|1231767_1234152_+	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
WP_004178082.1|1234629_1236117_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004151011.1|1236224_1236413_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
WP_004151010.1|1236424_1236658_+	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
WP_004151009.1|1236753_1237437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004151008.1|1237423_1238503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004151007.1|1238502_1239504_-	hypothetical protein	NA	NA	NA	NA	NA
WP_024940854.1|1240025_1240295_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
WP_004151006.1|1240351_1241395_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
WP_019405037.1|1241394_1243158_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
WP_004151004.1|1243298_1244132_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
WP_004151003.1|1244148_1245201_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
WP_004134644.1|1245204_1245858_+|terminase	terminase endonuclease subunit	terminase	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
WP_004151002.1|1245953_1246418_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
WP_004151001.1|1246417_1246621_+|tail	tail protein X	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
WP_004134639.1|1246624_1246840_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
WP_004151000.1|1246820_1247330_+	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
WP_004150999.1|1247334_1247718_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
WP_004150998.1|1247714_1248143_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
WP_072093160.1|1248117_1248276_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	75.0	9.0e-15
WP_004150997.1|1248238_1248661_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
WP_004150996.1|1248653_1249100_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
WP_004150995.1|1249122_1249989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150994.1|1250083_1250656_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
WP_004150993.1|1250652_1251015_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
WP_004150992.1|1251001_1251910_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
WP_004152935.1|1251902_1252574_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
WP_004150990.1|1252575_1254525_+|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
1252938:1252954	attR	CCTGCGCCAGCAGCTGG	NA	NA	NA	NA
WP_004200602.1|1254534_1255653_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
WP_004150988.1|1255704_1256778_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
WP_004150987.1|1256926_1258099_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
WP_004150986.1|1258108_1258624_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
WP_004150985.1|1258676_1258976_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
WP_002896220.1|1258990_1259110_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_072093161.1|1259336_1261733_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	44.5	8.1e-107
WP_004150983.1|1261729_1262215_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
WP_004150982.1|1262211_1263306_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
WP_004150981.1|1263372_1263591_+	positive regulator of late gene transcription	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
WP_004150980.1|1263618_1263996_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002914164.1|1264599_1265082_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
WP_004188817.1|1265192_1265669_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_002914161.1|1265658_1265949_+	RnfH family protein	NA	NA	NA	NA	NA
WP_002914160.1|1266015_1266357_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_004145681.1|1266338_1266479_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002914159.1|1266504_1268166_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_002914158.1|1268252_1269131_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_002914155.1|1269255_1269846_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_004149392.1|1269965_1271252_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_002914153.1|1271271_1272063_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
WP_002914152.1|1272226_1273591_+	signal recognition particle protein	NA	NA	NA	NA	NA
WP_002914149.1|1273850_1274099_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
WP_004150977.1|1274117_1274666_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
WP_002914147.1|1274697_1275465_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 3
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1380181	1432924	5518379	tail,transposase,integrase,holin,terminase	Salmonella_phage(40.0%)	57	1373516:1373530	1403621:1403635
1373516:1373530	attL	TGAGCAGGTTCGCGA	NA	NA	NA	NA
WP_004151980.1|1380181_1381648_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
WP_004151979.1|1381715_1383293_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
WP_062955102.1|1383484_1384735_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
WP_063002073.1|1384677_1384920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004197356.1|1384916_1385510_-	MT-A70 family protein	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
WP_062955103.1|1385506_1386169_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
WP_048264082.1|1386165_1386324_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
WP_009485475.1|1386316_1386610_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
WP_062955104.1|1386719_1386968_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
WP_062955105.1|1387016_1387898_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
WP_062955106.1|1387894_1388716_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
WP_004164029.1|1388712_1389012_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
WP_004144290.1|1389378_1389960_-	helix-turn-helix transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
WP_004152538.1|1390114_1390348_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
WP_004152537.1|1390494_1390704_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
WP_004207253.1|1390703_1391471_+	hypothetical protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
WP_032418532.1|1391467_1392253_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
WP_048328152.1|1392372_1392720_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
WP_062955107.1|1392912_1393323_+	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
WP_032441402.1|1393306_1393498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032441401.1|1393494_1394139_+	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
WP_072200041.1|1394432_1394900_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
WP_029602865.1|1394899_1395193_+	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
WP_050491799.1|1395189_1395810_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
WP_032441458.1|1395809_1396013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_023339258.1|1396005_1396344_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
WP_004178082.1|1396440_1397928_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_032418540.1|1398328_1398586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032441400.1|1398663_1399248_+|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
WP_062955142.1|1399244_1400720_+	hypothetical protein	NA	Q858H3	Salmonella_phage	93.1	6.4e-280
WP_004200550.1|1400763_1401135_-	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
WP_004141368.1|1401888_1402095_+	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
WP_032441398.1|1402109_1403792_+|tail	tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
1403621:1403635	attR	TGAGCAGGTTCGCGA	NA	NA	NA	NA
WP_004152446.1|1403788_1404085_+	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
WP_032441397.1|1404087_1404768_+	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
WP_004200546.1|1404782_1405769_+	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
WP_020953461.1|1405822_1406260_+	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
WP_062955141.1|1406270_1406612_+	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
WP_004152441.1|1406662_1406986_+	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
WP_062955139.1|1406985_1407591_+	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
WP_062955138.1|1407590_1410068_+	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
WP_004152438.1|1410067_1410532_+	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
WP_032447858.1|1410531_1411071_+	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
WP_062955137.1|1411081_1413616_+	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
WP_062955136.1|1413615_1415526_+	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
WP_062955135.1|1415525_1418282_+	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
WP_062955133.1|1418758_1419055_-	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
WP_062955131.1|1421882_1422146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153233543.1|1422186_1423452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_073547080.1|1423433_1424414_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	98.5	1.5e-184
WP_000608644.1|1425282_1426545_-|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
WP_077265603.1|1427653_1428970_+	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
WP_062955010.1|1429056_1429461_+	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
WP_023339240.1|1429447_1429753_+|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
WP_062955009.1|1429742_1430372_+	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
WP_062955008.1|1430368_1430869_+	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
WP_004152009.1|1431055_1432924_-	sulfatase-like hydrolase/transferase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
>prophage 4
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1763121	1770027	5518379	tRNA	Planktothrix_phage(33.33%)	6	NA	NA
WP_004175147.1|1763121_1763985_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
WP_004899467.1|1763995_1764769_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
WP_004151134.1|1765010_1765907_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
WP_004144192.1|1766149_1767511_-|tRNA	tRNA 5-hydroxyuridine modification protein YegQ	tRNA	Q6DW11	Phage_TP	94.8	1.8e-207
WP_004175198.1|1767829_1768552_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
WP_062955084.1|1768548_1770027_-	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 5
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	1810762	1826508	5518379		Enterobacteria_phage(33.33%)	16	NA	NA
WP_062955058.1|1810762_1812169_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	3.6e-38
WP_062955056.1|1812392_1813457_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.7	4.4e-105
WP_062956182.1|1813470_1814340_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.4	3.4e-111
WP_048996045.1|1814371_1815262_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
WP_004175260.1|1815276_1815831_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
WP_000704907.1|1816010_1817177_+	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	7.0e-112
WP_016947628.1|1817605_1817725_-	small membrane protein	NA	NA	NA	NA	NA
WP_001741931.1|1817915_1818056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062955151.1|1818125_1819130_-	NAD-dependent epimerase	NA	E3T4Y8	Cafeteria_roenbergensis_virus	29.2	4.0e-31
WP_073547076.1|1819969_1821034_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	55.0	2.6e-105
WP_063002077.1|1821047_1821917_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	67.0	5.7e-111
WP_048996045.1|1821948_1822839_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	3.7e-28
WP_015958693.1|1822853_1823408_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	57.6	1.9e-51
WP_015958692.1|1823494_1824325_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_062955124.1|1824353_1825187_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_062955125.1|1825176_1826508_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.1	6.9e-15
>prophage 6
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	2793632	2803046	5518379		Escherichia_phage(87.5%)	9	NA	NA
WP_160463746.1|2793632_2795267_+	DUF4981 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	55.8	3.1e-182
WP_004151612.1|2795321_2796587_+	MFS transporter	NA	NA	NA	NA	NA
WP_001620097.1|2796617_2797706_-	AAA family ATPase	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
WP_002904006.1|2797792_2798053_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
WP_004176269.1|2798350_2799211_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002210513.1|2799231_2799993_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_004151610.1|2800253_2801156_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
WP_004151609.1|2801167_2802433_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
WP_002210516.1|2802425_2803046_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 7
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	3026069	3069011	5518379	terminase,integrase,transposase	Klebsiella_phage(33.33%)	63	3060124:3060138	3066133:3066147
WP_014343022.1|3026069_3029093_-	hypothetical protein	NA	A0A286S1P0	Klebsiella_phage	44.7	1.6e-22
WP_004152577.1|3029148_3029346_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004231602.1|3029320_3029452_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004231600.1|3029572_3029737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152575.1|3030211_3030985_-	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
WP_004152574.1|3030981_3032178_-	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
WP_004152573.1|3032177_3032531_-	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
WP_004152572.1|3032532_3033186_-	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
WP_004225248.1|3033239_3033590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004173705.1|3033842_3034028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152570.1|3034080_3034422_-	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
WP_004152569.1|3034421_3035444_-	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
WP_004217362.1|3035446_3035674_-	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	56.0	4.6e-20
WP_004225238.1|3035749_3036163_-	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	55.9	8.1e-31
WP_004152566.1|3036348_3038352_-	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
WP_004152565.1|3038341_3038494_-	hypothetical protein	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
WP_004152564.1|3038529_3038955_-	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
WP_004199809.1|3038958_3039399_-	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
WP_004152177.1|3039409_3040555_-	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
WP_004152176.1|3040558_3040999_-	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
WP_001116156.1|3041093_3041480_-	hypothetical protein	NA	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
WP_000834982.1|3041479_3041986_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000113538.1|3041982_3042402_-	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
WP_000725700.1|3042370_3042652_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001132269.1|3042691_3043633_-	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
WP_000528476.1|3043644_3044139_-	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
WP_004199270.1|3044142_3045345_-	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
WP_004152174.1|3045396_3045945_-	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
WP_004152173.1|3046000_3047452_-	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
WP_004152172.1|3047689_3049090_-|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
WP_004218030.1|3049040_3049529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152170.1|3049894_3050215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004153952.1|3050449_3050839_-	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
WP_004152169.1|3050835_3051366_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
WP_004146526.1|3051368_3051617_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004218026.1|3051634_3051763_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152168.1|3051800_3051956_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152167.1|3052022_3052805_-	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
WP_004198239.1|3052801_3053278_-	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
WP_004218023.1|3053274_3054252_-	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
WP_004198228.1|3054238_3055897_-	DEAD/DEAH box helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
WP_004152162.1|3056473_3056695_-	helix-turn-helix transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
WP_004152161.1|3056792_3057461_+	LexA family transcriptional regulator	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
WP_004152160.1|3057631_3057946_+	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
WP_004152159.1|3057938_3058127_+	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
WP_000019473.1|3058573_3059554_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
WP_004218017.1|3059700_3059862_+	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	96.2	1.5e-20
WP_004152157.1|3059854_3060109_+	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
3060124:3060138	attL	AGGCGCTGCAGGTCC	NA	NA	NA	NA
WP_004146412.1|3060176_3060299_+	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	100.0	1.3e-16
WP_004152156.1|3060295_3060721_+	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
WP_004152155.1|3060717_3060912_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152154.1|3060908_3061736_+	hypothetical protein	NA	Q8W654	Enterobacteria_phage	84.0	5.5e-111
WP_004152153.1|3061840_3062359_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
WP_004154298.1|3062364_3063075_+	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
WP_004152151.1|3063064_3063289_+	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
WP_004218013.1|3063384_3063498_+	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	100.0	4.6e-13
WP_014343018.1|3063740_3063974_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004198245.1|3064046_3064193_+	hypothetical protein	NA	A0A1B5FPC2	Escherichia_phage	70.8	2.9e-15
WP_004152148.1|3064152_3064395_+	hypothetical protein	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
WP_004152147.1|3064375_3065557_-|integrase	site-specific integrase	integrase	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
WP_016197745.1|3065753_3066302_+	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
3066133:3066147	attR	GGACCTGCAGCGCCT	NA	NA	NA	NA
WP_004152145.1|3066500_3068033_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
WP_004152144.1|3068249_3069011_-	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
>prophage 8
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	3101943	3132987	5518379	holin,integrase,transposase	Enterobacteria_phage(35.48%)	42	3101725:3101740	3130293:3130308
3101725:3101740	attL	TATGCCCTACGATAGC	NA	NA	NA	NA
WP_002901815.1|3101943_3102615_+	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
WP_071531199.1|3102801_3103629_+	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
WP_002901813.1|3103704_3104970_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
WP_002901812.1|3104971_3105391_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
WP_004178082.1|3105470_3106958_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_004152776.1|3107852_3108275_-	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
WP_001067855.1|3108867_3109572_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000679427.1|3110187_3110535_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001261740.1|3110698_3111490_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_001067855.1|3112471_3113176_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_062955100.1|3113212_3113500_-	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	95.4	4.4e-36
WP_004218565.1|3113496_3114036_-	glycoside hydrolase family 108 protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
WP_024940884.1|3114032_3114332_-|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	4.5e-47
WP_004232548.1|3114981_3115671_-	antiterminator-like protein	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
WP_004218534.1|3115670_3115811_-	YlcG family protein	NA	NA	NA	NA	NA
WP_004218533.1|3115807_3116446_-	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
WP_004218532.1|3116438_3117107_-	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
WP_004243010.1|3117103_3117271_-	NinE family protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
WP_004218531.1|3117251_3117719_-	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
WP_004243011.1|3117851_3118130_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004218530.1|3118239_3119268_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004196831.1|3119475_3119721_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004218528.1|3119776_3120079_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004201118.1|3120075_3120924_-	ATP-binding protein	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
WP_004201117.1|3120920_3121781_-	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
WP_001548453.1|3121866_3122088_-	hypothetical protein	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
WP_004201115.1|3122128_3122356_-	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
WP_004201113.1|3122467_3123166_+	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
WP_004201109.1|3123453_3124530_+	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
WP_004201108.1|3124611_3124815_-	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
WP_004219883.1|3125125_3125251_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073547062.1|3125243_3125438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004201105.1|3125526_3125811_+	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
WP_004201103.1|3125826_3126672_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
WP_088224434.1|3126668_3126956_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004201102.1|3126957_3127638_+	YqaJ viral recombinase family protein	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
WP_004151898.1|3127634_3128063_+	hypothetical protein	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
WP_004151899.1|3128059_3128722_+	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
WP_004151900.1|3128929_3130147_-|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	51.9	8.6e-121
WP_004151901.1|3130293_3131184_+	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
3130293:3130308	attR	TATGCCCTACGATAGC	NA	NA	NA	NA
WP_004140266.1|3131183_3132176_+	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
WP_004140269.1|3132177_3132987_+	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
>prophage 9
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	3260659	3348538	5518379	capsid,tail,lysis,integrase,head,portal,tRNA,terminase	Klebsiella_phage(44.19%)	96	3287462:3287476	3346349:3346363
WP_002901088.1|3260659_3261160_+|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
WP_002901080.1|3261276_3261723_+	DUF441 domain-containing protein	NA	NA	NA	NA	NA
WP_004140469.1|3261706_3262501_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_014343001.1|3262608_3263784_+	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_004140471.1|3263815_3264508_-	CTP synthase	NA	NA	NA	NA	NA
WP_004150778.1|3264653_3265163_+	DUF523 domain-containing protein	NA	NA	NA	NA	NA
WP_014343000.1|3265167_3265506_+	DUF488 family protein	NA	NA	NA	NA	NA
WP_004150780.1|3265495_3265735_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
WP_004150781.1|3266035_3267049_+	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.4e-12
WP_004150782.1|3267106_3267208_+	YoaK family small membrane protein	NA	NA	NA	NA	NA
WP_099119317.1|3267207_3267282_+	protein YoaJ	NA	NA	NA	NA	NA
WP_004140488.1|3267399_3267525_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140489.1|3267584_3267848_-	DUF2534 family protein	NA	NA	NA	NA	NA
WP_004150783.1|3267978_3268617_-	leucine efflux protein LeuE	NA	NA	NA	NA	NA
WP_004148038.1|3268706_3269621_-	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
WP_014342999.1|3270082_3270202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150784.1|3270282_3271326_-	type II asparaginase	NA	NA	NA	NA	NA
WP_004150785.1|3271628_3272837_+	HD domain-containing protein	NA	NA	NA	NA	NA
WP_004150787.1|3272910_3274695_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
WP_004150788.1|3274701_3275592_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_004140497.1|3275712_3277221_+	UbiD family decarboxylase	NA	NA	NA	NA	NA
WP_004150789.1|3277254_3277419_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004150790.1|3277531_3278218_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_004140501.1|3278615_3278795_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004150791.1|3278834_3279467_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_004140506.1|3280033_3280231_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004140509.1|3280346_3281357_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_004150793.1|3281353_3282760_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_004140512.1|3282815_3283703_-	manganese catalase family protein	NA	NA	NA	NA	NA
WP_004140514.1|3283719_3284226_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004150794.1|3284252_3284747_-	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
WP_004150795.1|3284837_3285023_-	general stress protein	NA	NA	NA	NA	NA
WP_004140529.1|3285644_3286838_+	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_004140530.1|3286950_3287178_+	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
WP_004225560.1|3287319_3287496_+	hypothetical protein	NA	NA	NA	NA	NA
3287462:3287476	attL	TGGCTGGCGTTCTTT	NA	NA	NA	NA
WP_004150797.1|3287614_3287938_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_004150798.1|3287930_3288323_+	amino acid-binding protein	NA	NA	NA	NA	NA
WP_004150799.1|3288319_3289033_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_004892953.1|3289305_3289458_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
WP_023328083.1|3289612_3291109_-|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	63.7	1.4e-125
WP_073547060.1|3291177_3303882_-	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.1	0.0e+00
WP_023328085.1|3303944_3304538_-|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	76.6	8.0e-80
WP_047666390.1|3304564_3304987_-	hypothetical protein	NA	J9Q806	Salmonella_phage	50.0	5.9e-29
WP_047666389.1|3305028_3305739_-	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.3	1.9e-136
WP_023328087.1|3305740_3306496_-|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.5	4.6e-125
WP_023328088.1|3306492_3306831_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	1.4e-57
WP_023328089.1|3306830_3310166_-|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	88.3	0.0e+00
WP_014228914.1|3310398_3310764_-|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
WP_023328090.1|3310821_3311283_-	hypothetical protein	NA	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
WP_023328091.1|3311314_3311716_-	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	2.3e-62
WP_017880258.1|3311712_3312102_-	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
WP_023328092.1|3312082_3312421_-|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	90.2	2.8e-53
WP_020317538.1|3312417_3312735_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
WP_049010370.1|3312715_3312976_-	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	60.5	7.4e-22
WP_023328094.1|3313034_3314321_-|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.0	9.8e-216
WP_014907815.1|3314398_3315319_-	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
WP_023279520.1|3315355_3316615_-|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	1.8e-222
WP_017898992.1|3316614_3316794_-	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
WP_021462603.1|3316787_3318509_-|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.5e-190
WP_012542168.1|3318508_3318943_-|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
WP_014907818.1|3319191_3319623_-	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.8e-41
WP_023297386.1|3319619_3319943_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032428746.1|3319894_3320257_-	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	83.3	1.2e-57
WP_032749552.1|3320583_3320808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049115059.1|3320846_3321284_-	hypothetical protein	NA	NA	NA	NA	NA
WP_016160650.1|3322233_3322584_-	hypothetical protein	NA	R9TPM9	Aeromonas_phage	38.1	7.9e-11
WP_032432826.1|3322580_3323078_-	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.6	1.1e-77
WP_016160648.1|3323077_3323293_-|lysis	phage S lysis protein	lysis	A5LH82	Enterobacteria_phage	88.7	2.7e-30
WP_004147999.1|3324210_3324360_+	small membrane protein	NA	NA	NA	NA	NA
WP_004147997.1|3325097_3325301_+	hypothetical protein	NA	NA	NA	NA	NA
WP_025861432.1|3325544_3326147_-	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.6	1.1e-76
WP_062955112.1|3326163_3327195_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.6	4.7e-96
WP_025861428.1|3327394_3327787_-	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	8.0e-12
WP_077255782.1|3327827_3328118_-	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	8.0e-17
WP_025368263.1|3328129_3328363_-	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	3.7e-25
WP_004178082.1|3328441_3329929_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_062954975.1|3330766_3332128_-	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA	NA
WP_062954976.1|3332301_3333015_-	hypothetical protein	NA	NA	NA	NA	NA
WP_062954989.1|3333366_3334236_+	hypothetical protein	NA	NA	NA	NA	NA
WP_062954977.1|3334324_3335716_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032443841.1|3336064_3336505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_047667474.1|3336518_3336983_-	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	72.2	4.1e-63
WP_077265602.1|3336975_3337980_-	DNA-binding protein	NA	A0A0U2RT81	Escherichia_phage	40.0	1.0e-31
WP_046622349.1|3338039_3338594_-	hypothetical protein	NA	NA	NA	NA	NA
WP_071561166.1|3338596_3338821_-	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	62.5	1.3e-19
WP_077257742.1|3338909_3339347_+	helix-turn-helix domain-containing protein	NA	H6WRX4	Salmonella_phage	62.2	1.3e-39
WP_040234937.1|3339668_3339983_-	hypothetical protein	NA	NA	NA	NA	NA
WP_023279538.1|3340373_3340568_+	DUF1482 family protein	NA	NA	NA	NA	NA
WP_014228879.1|3340610_3340955_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_062954978.1|3341096_3343235_+	exodeoxyribonuclease VIII	NA	S4TNL0	Salmonella_phage	42.7	5.6e-99
WP_012542206.1|3343287_3343533_+	excisionase	NA	NA	NA	NA	NA
WP_032418030.1|3343513_3344641_+|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	58.4	4.4e-119
WP_004150800.1|3344758_3346009_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
WP_004150801.1|3346249_3346900_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
3346349:3346363	attR	AAAGAACGCCAGCCA	NA	NA	NA	NA
WP_004150802.1|3346916_3347375_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_004150803.1|3347431_3348538_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 10
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	3564881	3657832	5518379	capsid,tail,lysis,plate,integrase,head,portal,tRNA,protease,terminase	Salmonella_phage(57.63%)	97	3620407:3620425	3657907:3657925
WP_002898139.1|3564881_3566174_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.7	7.3e-94
WP_002898137.1|3566264_3567608_-	replication-associated recombination protein RarA	NA	G3MBE0	Bacillus_virus	40.8	7.3e-81
WP_002898132.1|3567616_3568228_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_004150846.1|3568350_3572604_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.2	5.2e-88
WP_000228469.1|3572739_3573234_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_004147787.1|3573517_3573649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002898019.1|3573766_3574735_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.0	3.2e-62
WP_002898017.1|3574849_3576616_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	25.9	2.3e-21
WP_004150847.1|3576616_3578338_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
WP_004141853.1|3578364_3579084_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|3579437_3579656_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_002896522.1|3579776_3582056_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
WP_002896520.1|3582086_3582404_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
WP_002896516.1|3582729_3582951_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
WP_004150848.1|3583027_3584968_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
WP_002896440.1|3584964_3586080_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
WP_002896437.1|3586226_3587885_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
WP_002896434.1|3588304_3589000_+	aquaporin Z	NA	NA	NA	NA	NA
WP_004147773.1|3589115_3590015_+	lysine exporter LysO family protein	NA	NA	NA	NA	NA
WP_002896412.1|3590158_3591811_+	hydroxylamine reductase	NA	NA	NA	NA	NA
WP_002896410.1|3591821_3592790_+	NADH oxidoreductase	NA	NA	NA	NA	NA
WP_002896408.1|3593001_3593436_-	DoxX family protein	NA	NA	NA	NA	NA
WP_002896406.1|3593587_3595306_+	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
WP_002896404.1|3595344_3596346_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_002896401.1|3596356_3597799_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002896399.1|3597886_3598900_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002896397.1|3598896_3599727_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1B0UZW5	Roseobacter_phage	31.6	4.1e-05
WP_004150851.1|3599758_3600898_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_002896394.1|3601775_3602291_+	lipoprotein	NA	NA	NA	NA	NA
WP_032419144.1|3602517_3603246_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	37.1	1.2e-29
WP_002896390.1|3603266_3603998_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002896386.1|3604004_3604721_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_004150852.1|3604720_3605389_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_002896384.1|3605572_3606304_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002896382.1|3606346_3607819_-	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.8	7.9e-28
WP_002896380.1|3607815_3608532_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	36.9	2.1e-34
WP_002896378.1|3608610_3609738_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A2K5B251	Erysipelothrix_phage	25.6	1.3e-19
WP_002896376.1|3609779_3610268_-	DUF2593 family protein	NA	NA	NA	NA	NA
WP_002896372.1|3610325_3611171_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_002896371.1|3611167_3612121_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_004176719.1|3612131_3613298_-	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.9	2.3e-30
WP_002896368.1|3613428_3614541_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_002896365.1|3614889_3615369_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_002896363.1|3615457_3616360_-	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	35.3	2.0e-34
WP_002896354.1|3617181_3617469_-	YbjC family protein	NA	NA	NA	NA	NA
WP_002896352.1|3617671_3617935_+	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	73.1	1.6e-27
WP_002896351.1|3617941_3618325_-	membrane protein	NA	NA	NA	NA	NA
WP_004179131.1|3618591_3620277_+	aspartate:alanine antiporter	NA	NA	NA	NA	NA
WP_004226292.1|3620268_3620391_-	hypothetical protein	NA	NA	NA	NA	NA
3620407:3620425	attL	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
WP_000972391.1|3620496_3620715_-	transcriptional activator Ogr/delta	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
WP_002896225.1|3620806_3621907_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
WP_002896224.1|3621903_3622389_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
WP_014342962.1|3622385_3624779_-|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	44.0	1.1e-106
WP_002896220.1|3625005_3625125_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
WP_002896204.1|3625139_3625439_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
WP_002896201.1|3625491_3626007_-|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
WP_002896193.1|3626016_3627189_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
WP_002896191.1|3627327_3628404_-|tail	phage tail protein	tail	Q37842	Escherichia_phage	44.8	1.2e-25
WP_004232615.1|3628433_3628595_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002896186.1|3628633_3629365_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152882.1|3629368_3632320_-	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
WP_004150856.1|3632321_3632921_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
WP_002896182.1|3632913_3633822_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
WP_032441567.1|3633808_3634171_-|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
WP_002896177.1|3634167_3634740_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
WP_004226282.1|3634854_3635019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004199112.1|3635017_3635527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002896175.1|3635523_3635970_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
WP_002896172.1|3635962_3636394_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
WP_002896170.1|3636356_3636503_-	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	76.1	6.0e-13
WP_002896168.1|3636489_3636918_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
WP_002896163.1|3636914_3637298_-	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
WP_002896161.1|3637302_3637812_-	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
WP_002896158.1|3637792_3638008_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
WP_002896155.1|3638011_3638215_-|tail	tail protein X	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
WP_002896151.1|3638214_3638679_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
WP_000059191.1|3638774_3639425_-|terminase	terminase endonuclease subunit	terminase	E5G6M7	Salmonella_phage	96.3	8.7e-112
WP_002895972.1|3639428_3640487_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
WP_002895967.1|3640503_3641337_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
WP_004150858.1|3641479_3643246_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
WP_002895959.1|3643245_3644271_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
WP_004199124.1|3644332_3646075_-	AIPR family protein	NA	NA	NA	NA	NA
WP_000700647.1|3646350_3647028_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001217575.1|3647142_3647376_-	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_001154434.1|3647386_3647575_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
WP_004150862.1|3647728_3650143_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
WP_004150863.1|3650139_3650997_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
WP_000752622.1|3650993_3651221_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
WP_004150864.1|3651220_3651454_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
WP_000963473.1|3651521_3651863_-	DUF5347 domain-containing protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
WP_000956179.1|3651826_3652027_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
WP_000460893.1|3652034_3652544_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
WP_000188448.1|3652576_3652798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152885.1|3652943_3653822_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
WP_004150866.1|3653833_3654778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004178082.1|3654876_3656364_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_014342959.1|3656851_3657832_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	57.2	1.4e-97
3657907:3657925	attR	ATGGGTTTTTTGTTGCCTG	NA	NA	NA	NA
>prophage 11
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	4310705	4322358	5518379	integrase	Enterobacteria_phage(70.0%)	15	4310557:4310570	4314770:4314783
4310557:4310570	attL	TCTGACATATTTTT	NA	NA	NA	NA
WP_004144574.1|4310705_4311809_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
WP_002889940.1|4311819_4313073_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
WP_002889938.1|4313425_4314616_+|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	62.7	6.4e-145
WP_004152029.1|4314603_4315554_+	AAA family ATPase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
4314770:4314783	attR	AAAAATATGTCAGA	NA	NA	NA	NA
WP_004152979.1|4315553_4315979_+	hypothetical protein	NA	NA	NA	NA	NA
WP_020802988.1|4316325_4316475_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004152202.1|4316546_4317113_-	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
WP_004152203.1|4317130_4317376_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
WP_062956184.1|4317372_4318110_-	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
WP_004903606.1|4318409_4318547_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002889915.1|4318651_4318918_+	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
WP_072028197.1|4318920_4319472_+	ash family protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
WP_004219964.1|4319516_4319696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002889897.1|4319692_4320013_+	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_002889890.1|4320024_4322358_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
>prophage 12
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	4790604	4800129	5518379	transposase	Enterobacteria_phage(85.71%)	12	NA	NA
WP_004152207.1|4790604_4792938_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.9	0.0e+00
WP_004152206.1|4792952_4793273_-	DUF5375 domain-containing protein	NA	NA	NA	NA	NA
WP_004152205.1|4793269_4793497_-	hypothetical protein	NA	NA	NA	NA	NA
WP_072093163.1|4793493_4794036_-	ash family protein	NA	Q7M2A7	Enterobacteria_phage	69.4	1.1e-30
WP_000556592.1|4794038_4794305_-	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.0e-30
WP_004152204.1|4794865_4795603_+	hypothetical protein	NA	Q7M2A2	Enterobacteria_phage	59.4	1.1e-70
WP_004152203.1|4795599_4795845_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
WP_004152202.1|4795862_4796429_+	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
WP_014342868.1|4796500_4796650_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152201.1|4797169_4798249_+	hypothetical protein	NA	NA	NA	NA	NA
WP_004152200.1|4798249_4798786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000019445.1|4799148_4800129_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
>prophage 13
NZ_CP026130	Klebsiella pneumoniae strain F1 chromosome, complete genome	5518379	4986777	5027198	5518379	integrase,transposase	Salmonella_phage(15.38%)	36	4976969:4976984	5006188:5006203
4976969:4976984	attL	CCTGGCCGGTGGCGTG	NA	NA	NA	NA
WP_001138082.1|4986777_4989663_-|transposase	Tn3 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	39.9	1.1e-190
WP_001389365.1|4990365_4991130_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
WP_000376623.1|4991636_4992137_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000259032.1|4992264_4993104_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	NA	NA	NA	NA
WP_000679427.1|4993097_4993445_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
WP_001261740.1|4993608_4994400_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
WP_042862943.1|4994492_4995752_-	chloramphenicol efflux MFS transporter CmlA10	NA	S4TR35	Salmonella_phage	31.3	1.1e-25
WP_000381802.1|4996006_4996540_-	aminoglycoside nucleotidyltransferase ANT(2'')-Ia	NA	NA	NA	NA	NA
WP_015059047.1|4996613_4996946_-	quaternary ammonium compound efflux SMR transporter QacL	NA	E5E3Y9	Acinetobacter_phage	34.3	3.5e-08
WP_015057121.1|4997196_4998156_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	40.5	1.7e-47
WP_001067855.1|4998046_4998751_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001082319.1|4998979_4999783_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	Q75ZG1	Hepacivirus	34.3	4.9e-24
WP_000480968.1|4999782_5000619_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
WP_028690953.1|5000742_5001108_-	DUF3742 family protein	NA	NA	NA	NA	NA
WP_028690952.1|5001192_5001825_-	RES family NAD+ phosphorylase	NA	NA	NA	NA	NA
WP_023657212.1|5001837_5002464_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028690951.1|5002783_5004628_+	DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_028690950.1|5004708_5007360_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	33.9	5.2e-155
5006188:5006203	attR	CACGCCACCGGCCAGG	NA	NA	NA	NA
WP_028690949.1|5007385_5009251_-	Na+/H+ antiporter NhaA	NA	A0A2H4J5W3	uncultured_Caudovirales_phage	37.1	3.4e-52
WP_028690948.1|5009311_5010625_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.2	1.3e-77
WP_028690947.1|5010676_5011984_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_023464790.1|5012002_5012833_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_023464791.1|5012891_5014226_-	DUF3422 domain-containing protein	NA	NA	NA	NA	NA
WP_023103885.1|5014408_5014807_-	VOC family protein	NA	NA	NA	NA	NA
WP_011871467.1|5014850_5015960_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.4	2.9e-35
WP_028690946.1|5016019_5016295_-	formaldehyde-responsive transcriptional repressor FrmR	NA	NA	NA	NA	NA
WP_028690945.1|5016577_5017468_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_028690944.1|5017464_5018073_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
WP_023103882.1|5018074_5018482_-	SnoaL-like domain-containing protein	NA	NA	NA	NA	NA
WP_023103881.1|5018636_5019542_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_028690943.1|5019692_5021669_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_023835768.1|5022044_5022476_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
WP_129028112.1|5022581_5022890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_006473314.1|5022883_5023222_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_072160368.1|5023282_5024833_+|transposase	IS66 family transposase	transposase	A0A218MNE7	uncultured_virus	42.0	4.5e-90
WP_096634014.1|5026027_5027198_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	61.7	1.5e-90
>prophage 1
NZ_CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	5197	19003	164510	transposase	Enterobacteria_phage(18.18%)	18	NA	NA
WP_000019445.1|5197_6178_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
WP_015493087.1|6691_7087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015493086.1|7083_7695_+	DUF2913 family protein	NA	NA	NA	NA	NA
WP_015493085.1|7691_8642_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
WP_040219232.1|8788_8989_-	hypothetical protein	NA	NA	NA	NA	NA
WP_022652286.1|9042_9675_-	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
WP_015493083.1|10037_11243_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
WP_016479949.1|11239_12211_+	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
WP_015493081.1|12346_13618_-	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
WP_015493080.1|13617_14040_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
WP_015493079.1|14219_14891_-	Gifsy-2 prophage protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
WP_002211749.1|15249_15927_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
WP_015493077.1|15926_16148_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015493076.1|16158_16578_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
WP_015493075.1|16631_17411_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015493074.1|17815_18322_+	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
WP_015493073.1|18364_18556_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015493072.1|18748_19003_+	hypothetical protein	NA	H9C187	Pectobacterium_phage	46.2	5.2e-12
>prophage 2
NZ_CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	48770	57953	164510		Escherichia_phage(42.86%)	12	NA	NA
WP_001568041.1|48770_49472_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
WP_014343518.1|49673_49790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001568040.1|49908_50139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_013214012.1|50201_50873_-	mediator of plasmid stability	NA	NA	NA	NA	NA
WP_004152353.1|50875_51847_-	mediator of plasmid stability	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
WP_014343519.1|51977_52103_-	hypothetical protein	NA	NA	NA	NA	NA
WP_004178082.1|52095_53583_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
WP_014343520.1|53895_54012_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001568036.1|53989_54421_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
WP_013214011.1|54420_55692_+	Y-family DNA polymerase	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
WP_011977819.1|55773_56748_-	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	53.8	1.4e-86
WP_011977818.1|56747_57953_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
>prophage 3
NZ_CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	73092	85483	164510	transposase	Escherichia_phage(55.56%)	12	NA	NA
WP_013213989.1|73092_73518_-	antirestriction protein	NA	A0A2D0W8Z5	Bordetella_virus	37.3	5.3e-17
WP_013213990.1|73628_73907_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014343470.1|73890_74286_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014343471.1|74440_75001_-	replication protein	NA	NA	NA	NA	NA
WP_001323888.1|75293_75461_-	hypothetical protein	NA	A0A1B0V7I9	Salmonella_phage	98.2	2.3e-24
WP_001161490.1|75449_76010_+	recombinase family protein	NA	A0A1B0V7I5	Salmonella_phage	100.0	1.1e-59
WP_001138014.1|76013_78980_+|transposase	Tn3-like element TnAs1 family transposase	transposase	A0A1B0V7H9	Salmonella_phage	100.0	0.0e+00
WP_002904004.1|79220_80081_+	class A extended-spectrum beta-lactamase SHV-12	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
WP_002210513.1|80101_80863_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
WP_002903955.1|81124_82027_+	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.7	2.6e-159
WP_001067855.1|83660_84365_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001067855.1|84778_85483_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
>prophage 4
NZ_CP026131	Klebsiella pneumoniae strain F1 plasmid pF1_1, complete sequence	164510	137135	151763	164510	protease,transposase	Escherichia_phage(50.0%)	14	NA	NA
WP_001067858.1|137135_137840_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
WP_012372818.1|138289_139045_-	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
WP_000027057.1|139214_140075_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
WP_064441864.1|140257_140794_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	2.8e-84
WP_000957857.1|140885_141074_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|141751_142456_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001067855.1|143566_144271_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_013362812.1|146021_146990_-|transposase	IS5-like element IS903B family transposase	transposase	A0A1B0VFY5	Salmonella_phage	100.0	1.6e-186
WP_013188475.1|147024_147900_-	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
WP_014342101.1|147879_148002_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001067855.1|148410_149115_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_001398199.1|150425_150827_-	type II toxin-antitoxin system toxin endoribonuclease PemK	NA	NA	NA	NA	NA
WP_000557619.1|150759_151017_-	type II toxin-antitoxin system antitoxin PemI	NA	NA	NA	NA	NA
WP_000616807.1|151109_151763_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
