assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_003363735.1_ASM336373v2	NZ_CP031372	Klebsiella pneumoniae strain KpvST101_OXA-48 plasmid pKpvST101_5, complete sequence	1	145404-145555	1	PILER-CR	no	DinG,RT	c2c9_V-U4,DinG,RT	Unclear	AGTATTCCCCCCGCATGCGGGGGTTATCGG	30	1	1	145495-145525	NZ_CP031369.1_88488-88518	NA	2	2	Orphan	DinG,DEDDh,cas3,RT,csa3,WYL,c2c9_V-U4	NA|61aa|up_9|NZ_CP031372.1_135521_135704_+,NA|132aa|up_8|NZ_CP031372.1_135894_136290_+,NA|136aa|up_7|NZ_CP031372.1_136299_136707_+,NA|137aa|up_6|NZ_CP031372.1_136736_137147_+,NA|264aa|up_4|NZ_CP031372.1_139572_140364_+,NA|236aa|up_1|NZ_CP031372.1_142803_143511_+,NA|84aa|down_0|NZ_CP031372.1_146064_146316_+,NA|60aa|down_2|NZ_CP031372.1_147715_147895_+,NA|87aa|down_7|NZ_CP031372.1_150699_150960_-,NA|126aa|down_9|NZ_CP031372.1_153614_153992_-	NA|61aa|up_9|NZ_CP031372.1_135521_135704_+	NA	NA|132aa|up_8|NZ_CP031372.1_135894_136290_+	NA	NA|136aa|up_7|NZ_CP031372.1_136299_136707_+	NA	NA|137aa|up_6|NZ_CP031372.1_136736_137147_+	NA	NA|138aa|up_5|NZ_CP031372.1_139096_139510_+	pfam01637, ATPase_2, ATPase domain predominantly from Archaea	NA|264aa|up_4|NZ_CP031372.1_139572_140364_+	NA	NA|189aa|up_3|NZ_CP031372.1_140366_140933_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	DinG|625aa|up_2|NZ_CP031372.1_140935_142810_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|236aa|up_1|NZ_CP031372.1_142803_143511_+	NA	NA|264aa|up_0|NZ_CP031372.1_143755_144547_+	pfam08317, Spc7, Spc7 kinetochore protein	NA|84aa|down_0|NZ_CP031372.1_146064_146316_+	NA	RT|495aa|down_1|NZ_CP031372.1_146315_147800_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|60aa|down_2|NZ_CP031372.1_147715_147895_+	NA	NA|141aa|down_3|NZ_CP031372.1_147885_148308_+	PRK10276, PRK10276, translesion error-prone DNA polymerase V autoproteolytic subunit	NA|424aa|down_4|NZ_CP031372.1_148307_149579_+	PRK03609, umuC, translesion error-prone DNA polymerase V subunit UmuC	NA|148aa|down_5|NZ_CP031372.1_149679_150123_+	TIGR02293, conserved_protein_of_unknown_function, putative toxin-antitoxin system antitoxin component, TIGR02293 family	NA|157aa|down_6|NZ_CP031372.1_150119_150590_+	pfam08808, RES, RES domain	NA|87aa|down_7|NZ_CP031372.1_150699_150960_-	NA	NA|53aa|down_8|NZ_CP031372.1_151681_151840_+	PRK09738, PRK09738, small toxic polypeptide; Provisional	NA|126aa|down_9|NZ_CP031372.1_153614_153992_-	NA
GCF_003363735.1_ASM336373v2	NZ_CP031368	Klebsiella pneumoniae strain KpvST101_OXA-48 chromosome, complete genome	1	157644-157745	1	CRISPRCasFinder	no		DinG,DEDDh,cas3,RT,csa3,WYL	Orphan	TGTAGCCTCGCTAAGCGAAGCGCGAGCGATGAGA	34	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,RT,csa3,WYL,c2c9_V-U4	NA,NA|62aa|down_8|NZ_CP031368.1_167839_168025_+	NA|461aa|up_9|NZ_CP031368.1_143562_144945_+	PRK10177, PRK10177, YchO/YchP family invasin	NA|217aa|up_8|NZ_CP031368.1_144941_145592_-	PRK10651, PRK10651, transcriptional regulator NarL; Provisional	NA|593aa|up_7|NZ_CP031368.1_145602_147381_-	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX	NA|463aa|up_6|NZ_CP031368.1_147692_149081_+	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional	NA|1248aa|up_5|NZ_CP031368.1_149486_153230_+	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion]	NA|512aa|up_4|NZ_CP031368.1_153226_154762_+	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|237aa|up_3|NZ_CP031368.1_154758_155469_+	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone	NA|226aa|up_2|NZ_CP031368.1_155468_156146_+	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain	NA|299aa|up_1|NZ_CP031368.1_156142_157039_-	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|148aa|up_0|NZ_CP031368.1_157146_157590_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|281aa|down_0|NZ_CP031368.1_158669_159512_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|153aa|down_1|NZ_CP031368.1_159554_160013_-	PRK01617, PRK01617, hypothetical protein; Provisional	NA|301aa|down_2|NZ_CP031368.1_160125_161028_+	PRK10279, PRK10279, patatin-like phospholipase RssA	NA|338aa|down_3|NZ_CP031368.1_161117_162131_+	PRK10693, PRK10693, two-component system response regulator RssB	NA|301aa|down_4|NZ_CP031368.1_162328_163231_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|136aa|down_5|NZ_CP031368.1_163352_163760_-	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS	NA|206aa|down_6|NZ_CP031368.1_164321_164939_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|892aa|down_7|NZ_CP031368.1_165086_167762_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|62aa|down_8|NZ_CP031368.1_167839_168025_+	NA	NA|216aa|down_9|NZ_CP031368.1_168238_168886_+	PRK11111, PRK11111, YchE family NAAT transporter
GCF_003363735.1_ASM336373v2	NZ_CP031368	Klebsiella pneumoniae strain KpvST101_OXA-48 chromosome, complete genome	2	2053676-2053771	2	CRISPRCasFinder	no		DinG,DEDDh,cas3,RT,csa3,WYL	Orphan	TGGCACTTTGTTGGCATTCTGTTGGCACAA	30	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,RT,csa3,WYL,c2c9_V-U4	NA|72aa|up_6|NZ_CP031368.1_2049079_2049295_-,NA|63aa|up_4|NZ_CP031368.1_2050212_2050401_-,NA|82aa|up_3|NZ_CP031368.1_2050861_2051107_-,NA|149aa|up_2|NZ_CP031368.1_2051103_2051550_-,NA|76aa|down_1|NZ_CP031368.1_2054651_2054879_-,NA|40aa|down_3|NZ_CP031368.1_2055692_2055812_+,NA|95aa|down_5|NZ_CP031368.1_2056638_2056923_+	NA|213aa|up_9|NZ_CP031368.1_2047506_2048145_-	pfam05766, NinG, Bacteriophage Lambda NinG protein	NA|57aa|up_8|NZ_CP031368.1_2048137_2048308_-	PRK09689, PRK09689, prophage protein NinE; Provisional	NA|152aa|up_7|NZ_CP031368.1_2048307_2048763_-	PRK09741, PRK09741, hypothetical protein; Provisional	NA|72aa|up_6|NZ_CP031368.1_2049079_2049295_-	NA	NA|153aa|up_5|NZ_CP031368.1_2049287_2049746_-	pfam04448, DUF551, Protein of unknown function (DUF551)	NA|63aa|up_4|NZ_CP031368.1_2050212_2050401_-	NA	NA|82aa|up_3|NZ_CP031368.1_2050861_2051107_-	NA	NA|149aa|up_2|NZ_CP031368.1_2051103_2051550_-	NA	NA|98aa|up_1|NZ_CP031368.1_2051552_2051846_-	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors	NA|477aa|up_0|NZ_CP031368.1_2051845_2053276_-	TIGR03600, phage_DnaB, phage replicative helicase, DnaB family, HK022 subfamily	NA|74aa|down_0|NZ_CP031368.1_2054389_2054611_-	pfam05269, Phage_CII, Bacteriophage CII protein	NA|76aa|down_1|NZ_CP031368.1_2054651_2054879_-	NA	NA|241aa|down_2|NZ_CP031368.1_2054947_2055670_+	COG2932, COG2932, Predicted transcriptional regulator [Transcription]	NA|40aa|down_3|NZ_CP031368.1_2055692_2055812_+	NA	NA|69aa|down_4|NZ_CP031368.1_2056350_2056557_+	PRK11354, kil, FtsZ inhibitor protein; Reviewed	NA|95aa|down_5|NZ_CP031368.1_2056638_2056923_+	NA	NA|305aa|down_6|NZ_CP031368.1_2056932_2057847_+	PRK09846, recT, recombination protein RecT	NA|161aa|down_7|NZ_CP031368.1_2057843_2058326_+	pfam05565, Sipho_Gp157, Siphovirus Gp157	NA|102aa|down_8|NZ_CP031368.1_2058360_2058666_+	pfam13936, HTH_38, Helix-turn-helix domain	NA|219aa|down_9|NZ_CP031368.1_2058662_2059319_+	COG4725, IME4, Transcriptional activator, adenine-specific DNA methyltransferase [Signal transduction mechanisms / Transcription]
GCF_003363735.1_ASM336373v2	NZ_CP031368	Klebsiella pneumoniae strain KpvST101_OXA-48 chromosome, complete genome	3	4566026-4566134	3	CRISPRCasFinder	no		DinG,DEDDh,cas3,RT,csa3,WYL	Orphan	TGTCCCACCCTGTACCACTTTTTTTAA	27	0	0	NA	NA	NA	1	1	Orphan	DinG,DEDDh,cas3,RT,csa3,WYL,c2c9_V-U4	NA|182aa|up_9|NZ_CP031368.1_4559412_4559958_-,NA|82aa|up_7|NZ_CP031368.1_4560802_4561048_-,NA|69aa|up_6|NZ_CP031368.1_4561445_4561652_-,NA|1268aa|down_2|NZ_CP031368.1_4568955_4572759_-,NA|216aa|down_3|NZ_CP031368.1_4572947_4573595_-	NA|182aa|up_9|NZ_CP031368.1_4559412_4559958_-	NA	NA|150aa|up_8|NZ_CP031368.1_4559979_4560429_-	pfam05069, Phage_tail_S, Phage virion morphogenesis family	NA|82aa|up_7|NZ_CP031368.1_4560802_4561048_-	NA	NA|69aa|up_6|NZ_CP031368.1_4561445_4561652_-	NA	NA|338aa|up_5|NZ_CP031368.1_4562092_4563106_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|327aa|up_4|NZ_CP031368.1_4563116_4564097_-	COG3732, SrlE, Phosphotransferase system sorbitol-specific component IIBC [Carbohydrate transport and metabolism]	NA|125aa|up_3|NZ_CP031368.1_4564093_4564468_-	COG3731, SrlB, Phosphotransferase system sorbitol-specific component IIA [Carbohydrate transport and metabolism]	NA|174aa|up_2|NZ_CP031368.1_4564464_4564986_-	COG3730, SrlA, Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]	NA|95aa|up_1|NZ_CP031368.1_4565098_4565383_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|119aa|up_0|NZ_CP031368.1_4565477_4565834_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|690aa|down_0|NZ_CP031368.1_4566152_4568222_-	COG5519, COG5519, Superfamily II helicase and inactivated derivatives [DNA replication, recombination, and repair]	NA|72aa|down_1|NZ_CP031368.1_4568257_4568473_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|1268aa|down_2|NZ_CP031368.1_4568955_4572759_-	NA	NA|216aa|down_3|NZ_CP031368.1_4572947_4573595_-	NA	NA|161aa|down_4|NZ_CP031368.1_4575516_4575999_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|159aa|down_5|NZ_CP031368.1_4576109_4576586_+	PRK10724, PRK10724, type II toxin-antitoxin system RatA family toxin	NA|97aa|down_6|NZ_CP031368.1_4576575_4576866_+	PRK01777, PRK01777, RnfH family protein	NA|114aa|down_7|NZ_CP031368.1_4576932_4577274_-	PRK11548, PRK11548, outer membrane protein assembly factor BamE	NA|554aa|down_8|NZ_CP031368.1_4577420_4579082_-	PRK10869, PRK10869, recombination and repair protein; Provisional	NA|293aa|down_9|NZ_CP031368.1_4579168_4580047_-	PRK03378, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional
